Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0277
(769 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0058 - 3704138-3704257,3704355-3704421,3704502-3704641,370... 142 2e-34
04_04_0517 + 25841292-25842099,25842256-25842308 34 0.14
10_02_0176 + 6215326-6215352,6216870-6217445 32 0.58
08_01_1068 + 10899965-10900129,10900408-10900562,10900688-109009... 31 1.3
07_01_0802 - 6287180-6287605 31 1.3
09_04_0045 + 14094536-14094870,14094958-14095147 30 2.3
10_08_0241 - 16111792-16112367 29 3.1
09_04_0693 - 19518331-19518426,19518541-19518705,19518811-195188... 29 3.1
02_05_0530 - 29804939-29805547,29805658-29805885,29805978-298062... 29 3.1
01_06_0576 - 30365903-30366328,30367262-30367640,30368215-303684... 29 4.1
01_06_0065 + 26107522-26107700,26110875-26111253 29 4.1
09_02_0495 + 9880714-9881196 29 5.4
07_01_0806 - 6308383-6308856 29 5.4
03_05_0576 + 25765137-25766420 29 5.4
03_05_0327 - 23154014-23154942,23155169-23155316,23155606-231566... 29 5.4
12_01_0725 + 6428572-6428817 28 7.1
10_02_0094 - 5228472-5228703,5229040-5229133,5230627-5230675,523... 28 7.1
07_03_1107 - 24024387-24024497,24025799-24026410 28 7.1
02_03_0273 + 17173983-17174339,17174423-17174575,17174638-171747... 28 7.1
02_01_0574 + 4247469-4248196,4249501-4249691,4250565-4251022 28 7.1
01_06_1652 + 38918159-38918377,38918502-38919428 28 7.1
01_05_0191 - 19091991-19093223 28 7.1
10_08_0242 - 16120554-16121129 28 9.4
08_01_0812 + 7886057-7886872,7887115-7887702 28 9.4
05_05_0054 - 21936875-21937346,21937452-21937927 28 9.4
03_01_0349 - 2745251-2745410,2745873-2745943 28 9.4
>09_02_0058 -
3704138-3704257,3704355-3704421,3704502-3704641,
3705332-3705424,3705927-3706109,3706491-3706595,
3706738-3706818,3706905-3707046,3707207-3707286,
3707456-3707568,3708051-3708297,3708659-3709051
Length = 587
Score = 142 bits (345), Expect = 2e-34
Identities = 78/168 (46%), Positives = 106/168 (63%), Gaps = 23/168 (13%)
Frame = +3
Query: 255 LLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAAT 434
LLPAIVELAED WRVRLAIIE++PLLA QLG FFD+KL +LCM WL D V++IR+AA
Sbjct: 398 LLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLEDKVFSIRDAAA 457
Query: 435 LNLKKLVEQYGPQWVL---------------VLH*RAVRRC--------GKDITTRVLLP 545
NLK+L E++GP+W + L+ + + G +IT + LLP
Sbjct: 458 NNLKRLAEEFGPEWAMQHIIPQVLEKINNPHYLYRMTILQAISLLAPVMGAEITCQQLLP 517
Query: 546 TVLSMADDNVANVRFNVAKTLQIMAKYLDPAVIQPQVKPVLEKLNVGP 689
V++ + D V N++FNVAK LQ + LD +V++ VKP L +L+ P
Sbjct: 518 VVINSSKDRVPNIKFNVAKVLQALIPILDQSVVEKNVKPCLVELSEDP 565
Score = 102 bits (244), Expect = 4e-22
Identities = 48/75 (64%), Positives = 64/75 (85%)
Frame = +1
Query: 22 ILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNII 201
ILP +K+L D++QHV+SALASVIMG++P++G++ TIE LLP+FL+ LKDE P+VRLNII
Sbjct: 320 ILPCVKELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLLPIFLSLLKDEFPDVRLNII 379
Query: 202 SNLECVNEVIGIQQL 246
S L+ VN+VIGI L
Sbjct: 380 SKLDQVNQVIGIDLL 394
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/73 (23%), Positives = 39/73 (53%)
Frame = +1
Query: 13 MTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRL 192
M I+PQ+ + + + + + + I L+P++G + T + LLP+ + KD P ++
Sbjct: 473 MQHIIPQVLEKINNPHYLYRMTILQAISLLAPVMGAEITCQQLLPVVINSSKDRVPNIKF 532
Query: 193 NIISNLECVNEVI 231
N+ L+ + ++
Sbjct: 533 NVAKVLQALIPIL 545
Score = 41.5 bits (93), Expect = 7e-04
Identities = 37/143 (25%), Positives = 59/143 (41%)
Frame = +3
Query: 249 AVLLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREA 428
A +LP IV ++D WRVR + + L +G E E+L + L D+ +R A
Sbjct: 240 AHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEHSREQLVPAYVRLLRDNEAEVRIA 299
Query: 429 ATLNLKKLVEQYGPQWVLVLH*RAVRRCGKDITTRVLLPTVLSMADDNVANVRFNVAKTL 608
A + K PQ + + H +LP V ++ D+ +VR +A +
Sbjct: 300 AAGKVTKFCRILSPQ-LAIQH---------------ILPCVKELSSDSSQHVRSALASVI 343
Query: 609 QIMAKYLDPAVIQPQVKPVLEKL 677
MA L Q+ P+ L
Sbjct: 344 MGMAPVLGKEATIEQLLPIFLSL 366
Score = 37.9 bits (84), Expect = 0.009
Identities = 32/125 (25%), Positives = 60/125 (48%)
Frame = +3
Query: 255 LLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAAT 434
+LP + EL+ D+ VR A+ + +A LG+E E+L + +S L D +R
Sbjct: 320 ILPCVKELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLLPIFLSLLKDEFPDVR---- 375
Query: 435 LNLKKLVEQYGPQWVLVLH*RAVRRCGKDITTRVLLPTVLSMADDNVANVRFNVAKTLQI 614
LN+ ++Q + G D+ ++ LLP ++ +A+D VR + + + +
Sbjct: 376 LNIISKLDQVN------------QVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPL 423
Query: 615 MAKYL 629
+A L
Sbjct: 424 LASQL 428
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +1
Query: 22 ILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRL 192
ILP I + D + V+ +A+ + L VG +++ E L+P ++ L+D EVR+
Sbjct: 242 ILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEHSREQLVPAYVRLLRDNEAEVRI 298
>04_04_0517 + 25841292-25842099,25842256-25842308
Length = 286
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 337 RDSWARSSSTRS*PACACRGWWTTC-TPSARLR 432
R W+ +ST P C RGW TC +P+AR R
Sbjct: 183 RPRWSPGASTGRRPTCGARGWSCTCSSPAARSR 215
>10_02_0176 + 6215326-6215352,6216870-6217445
Length = 200
Score = 31.9 bits (69), Expect = 0.58
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +3
Query: 354 EFFDEKLTSLCMSWLVDHVYAIREAATLNLKK--LVEQYGPQWVLVLH*RAVRRCGKDIT 527
+F +K + +L+ VY + ++AT N+ K ++ GP W + L R D
Sbjct: 13 QFLVQKKHTPLGKYLLGSVYQMLQSATCNILKDEVINYGGPWWFMQLWLNMYTRLAVDKP 72
Query: 528 TRVLLPTVLSMADDNVANVR 587
+ L + ADD AN R
Sbjct: 73 SLALSAFPTTYADDEKANTR 92
>08_01_1068 +
10899965-10900129,10900408-10900562,10900688-10900996,
10901870-10901939,10902504-10902802,10904305-10904724,
10906063-10906324
Length = 559
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 292 SGGSVWPSSSTCLYWRDSWARSSSTRS*PACACRGWWT 405
S G +W SS C +W+ +W + T S PA R WT
Sbjct: 114 SAGVIW--SSAC-FWKVAWRKLQLTTSPPATPSRWHWT 148
>07_01_0802 - 6287180-6287605
Length = 141
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 529 PGCCCRPCCLWPTTMLPTCGSMLPRRC 609
PG CRP +PT LP C +++ R+C
Sbjct: 13 PGEQCRPGISYPTYSLPQCRTLVRRQC 39
>09_04_0045 + 14094536-14094870,14094958-14095147
Length = 174
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 352 WPSCPASRGMCSMMARRTLHLVSSASSTMAGRRTA 248
WP CPAS G+ M RR + + SA + +A + A
Sbjct: 31 WPCCPAS-GLFDQMPRRRWNTLCSADAALATKLVA 64
>10_08_0241 - 16111792-16112367
Length = 191
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 272 GAGRGHQV-EGPSGHHRAHASTGGTAGPG 355
GAG+G V G S ++ AHAS GG G G
Sbjct: 49 GAGKGSGVGSGSSNYYGAHASGGGGGGGG 77
>09_04_0693 -
19518331-19518426,19518541-19518705,19518811-19518894,
19518986-19519054,19519176-19519241,19519347-19519484,
19519636-19519866
Length = 282
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 195 VESDFGTFILQLCEEQRQEMFNSVLSAHY 109
+ D G++I+Q E RQE+FN V+ +Y
Sbjct: 249 LSQDNGSYIMQTVGEPRQELFNQVVLNNY 277
>02_05_0530 -
29804939-29805547,29805658-29805885,29805978-29806261,
29807095-29807199,29807648-29808155
Length = 577
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -3
Query: 494 LMQNKYPLRPVLLHQLLQVEGRSLADGVHVVHQPR 390
L +++ LRP+LLH LL EG+S AD H+PR
Sbjct: 446 LSLHRHALRPILLH-LLMWEGKS-ADAPARPHEPR 478
>01_06_0576 -
30365903-30366328,30367262-30367640,30368215-30368459,
30368819-30369039,30369786-30370074
Length = 519
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -2
Query: 177 TFILQLCEEQRQEMFNSVLSAHYGAQAHDDGG*CRLDVLVGITHQVLDLW 28
T IL + QE + H+G D G RL ++ I H+VL L+
Sbjct: 341 TLILLSMHPEWQEQAREEVMHHFGRTTPDHDGLSRLKIVTMILHEVLRLY 390
>01_06_0065 + 26107522-26107700,26110875-26111253
Length = 185
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +1
Query: 376 PACACRGWWTTCTPSARLRP 435
P C C W CTP ARLRP
Sbjct: 19 PPCPCPAWRLCCTP-ARLRP 37
>09_02_0495 + 9880714-9881196
Length = 160
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 248 CSPPPRHRGAGRGHQVEGPSGHHRAHASTGGTAGPGVL 361
C PPP GA + P+G + +S GG G G L
Sbjct: 37 CLPPPIAGGAVNSYPPPPPAGSSSSSSSGGGDGGAGGL 74
>07_01_0806 - 6308383-6308856
Length = 157
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 529 PGCCCRPCCLWPTTMLPTCGSMLPRRC 609
PG C+P +PT LP C + + R+C
Sbjct: 37 PGQLCQPGIGYPTYPLPRCRAFVKRQC 63
>03_05_0576 + 25765137-25766420
Length = 427
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -2
Query: 402 PPATTCTSWSASRRRTPGPAVPPVEACAR*WPDG 301
PP S S + P P +PPVEA R P G
Sbjct: 93 PPPAAAVSVSPPTQPRPRPELPPVEAVLRRQPKG 126
>03_05_0327 -
23154014-23154942,23155169-23155316,23155606-23156622,
23156753-23157217,23160258-23161247
Length = 1182
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +1
Query: 4 HIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPE 183
H I+ ++LP++ D+V D V+S+ +++ + + Q L L+ L ++ P
Sbjct: 443 HEILKVLLPRLSDMVSDPALSVRSSAVDLLLAIRDLRSFQFNKVVGLGTLLSSLSNDHPR 502
Query: 184 VRLNI 198
V I
Sbjct: 503 VAQKI 507
>12_01_0725 + 6428572-6428817
Length = 81
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 354 PGPAVPPVEACAR*WPDGPSTWCPLPAP 271
P P V P C+ + ++WCP P P
Sbjct: 50 PSPVVEPSGCCSGHRSEAVASWCPNPTP 77
>10_02_0094 -
5228472-5228703,5229040-5229133,5230627-5230675,
5231229-5231321,5231404-5231635,5232416-5232506,
5232693-5232784,5232862-5232970,5233331-5233430,
5233614-5233754,5233846-5234010,5234088-5234279,
5234409-5234537,5234619-5234734,5234821-5234965,
5235039-5235102,5235241-5235463,5235584-5236244,
5236909-5237250
Length = 1089
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 248 CSPPPRHRGAGRGHQVEGPSGHHRAHASTGG 340
CSP PR R AG G + P HR A GG
Sbjct: 29 CSPSPRRRHAGGGALLLRPP--HRRRAEPGG 57
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -2
Query: 411 TRGPPATTCTSWSASRRRTPGPAVPPVEACAR*WPDGPSTWCPLPAPR 268
T P A+T + + + TP PA P P ST P PAP+
Sbjct: 53 TTPPAASTPPAAAPTTPATPAPAEAPTTPAPTKAPPTKSTKAPAPAPK 100
>02_03_0273 +
17173983-17174339,17174423-17174575,17174638-17174700,
17174943-17175026,17175120-17175242,17175466-17175519,
17175669-17175764,17176163-17176258,17177179-17177324,
17178503-17178632,17178697-17179272,17179364-17179462,
17179535-17179687,17179794-17180558,17181384-17181683
Length = 1064
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 254 PPPRHRGAGRGHQVEGPSGHHRAH 325
PPP H AG G PS H H
Sbjct: 18 PPPPHAAAGGGGDAHTPSSHGHRH 41
>02_01_0574 + 4247469-4248196,4249501-4249691,4250565-4251022
Length = 458
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 254 PPPRHRGAGRGHQVEGPS-GHHRAHASTGGTAGPGVLRREADQLVHVVAGG 403
PPP +G S HH+A AST +G L+ AD H V GG
Sbjct: 284 PPPSKKGTDASIASSYTSCDHHKAAASTTTASGVSCLQELADH--HDVGGG 332
>01_06_1652 + 38918159-38918377,38918502-38919428
Length = 381
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 346 SCPASRGMCSMMARRTLHLVSSASSTMAGRRTAP 245
SCP +G S++A+ TL + S+ +A + TAP
Sbjct: 135 SCPPDQGSLSLVAKNTLVVAQSSRIYVAFQFTAP 168
>01_05_0191 - 19091991-19093223
Length = 410
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -2
Query: 396 ATTCTSWSASRRRTPGPAVPPVEACAR*WPDGPSTWCPLPAP-RWRGGG 253
A C W A+ R+ P P PP+ A PDG P P R+ G G
Sbjct: 38 AAVCPQWRATARQRPLPPPPPLPLLA--LPDGTFYSPPYDEPFRFPGFG 84
>10_08_0242 - 16120554-16121129
Length = 191
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 272 GAGRGHQV-EGPSGHHRAHASTGGTAGPG 355
GAG G G SG++ AHAS GG G G
Sbjct: 49 GAGLGSGTGSGRSGYNGAHASGGGGGGGG 77
>08_01_0812 + 7886057-7886872,7887115-7887702
Length = 467
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = -2
Query: 378 WSA--SRRRTPGPAVPPVEACAR*WPDGPSTWCPLPAPRWRGGGLHQLL 238
WS+ S +P P+ + W G W PAP GLHQ++
Sbjct: 41 WSSDSSTASSPAPSTLSSSCMSSPWGGGSGRWSASPAPA-ASSGLHQMV 88
>05_05_0054 - 21936875-21937346,21937452-21937927
Length = 315
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 254 PPPRHRGAGRGHQVEGPSGHHRAHASTGGTAGPGVL 361
PPP RGAG H + P + A AG G L
Sbjct: 262 PPPLGRGAGHHHFMPHPYAQVKIEAGNSHVAGGGRL 297
>03_01_0349 - 2745251-2745410,2745873-2745943
Length = 76
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -1
Query: 532 LVVMSLPHLRTAR*CRTSTHCGPYCSTSFFRLRVAASRMAYTWSTSHDMHKLVSFSS 362
LVV S +R+ CR+ G CS S ++ +A + ++ W D+H L + +S
Sbjct: 3 LVVSSSSTMRSI--CRSPFLSGKRCSASASKVALAIALLSSHWELDGDIHMLPNGTS 57
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,996,153
Number of Sequences: 37544
Number of extensions: 596656
Number of successful extensions: 2379
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2373
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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