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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0277
         (769 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_29772| Best HMM Match : HEAT (HMM E-Value=1.54143e-44)             138   5e-33
SB_43136| Best HMM Match : HEAT (HMM E-Value=1.7e-15)                 137   8e-33
SB_41601| Best HMM Match : zf-C2H2 (HMM E-Value=0.0019)                31   1.4  
SB_58281| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.8  
SB_48878| Best HMM Match : Fibrinogen_C (HMM E-Value=0)                29   3.1  
SB_50016| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.5  
SB_59449| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  
SB_58065| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  
SB_43647| Best HMM Match : VPS9 (HMM E-Value=1.1e-12)                  28   7.2  
SB_14574| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  
SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17)                  28   9.5  
SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)          28   9.5  
SB_1052| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   9.5  

>SB_29772| Best HMM Match : HEAT (HMM E-Value=1.54143e-44)
          Length = 405

 Score =  138 bits (334), Expect = 5e-33
 Identities = 63/77 (81%), Positives = 71/77 (92%)
 Frame = +3

Query: 255 LLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAAT 434
           LLPAIVELAEDTKWRVRLAIIE+MPLLAGQLG +FFDEKL +LCMSWLVDHV +IREAA 
Sbjct: 313 LLPAIVELAEDTKWRVRLAIIEYMPLLAGQLGVDFFDEKLNTLCMSWLVDHVCSIREAAA 372

Query: 435 LNLKKLVEQYGPQWVLV 485
           +NLKKLVE++GP+W  V
Sbjct: 373 INLKKLVEKFGPEWAQV 389



 Score =  135 bits (326), Expect = 4e-32
 Identities = 63/82 (76%), Positives = 73/82 (89%)
 Frame = +1

Query: 1   EHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECP 180
           E ++MT ILP +K+LV D NQHVKSALASVIMGLSP++G+ NTIEHLLPLFLT LKDE P
Sbjct: 228 ESVLMTNILPCVKELVIDPNQHVKSALASVIMGLSPLLGKDNTIEHLLPLFLTMLKDEFP 287

Query: 181 EVRLNIISNLECVNEVIGIQQL 246
           EVRLNIISNL+CVN+VIG+ QL
Sbjct: 288 EVRLNIISNLDCVNQVIGVHQL 309



 Score = 34.7 bits (76), Expect = 0.083
 Identities = 20/75 (26%), Positives = 32/75 (42%)
 Frame = +3

Query: 234 HPTAGAVLLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVY 413
           H    ++L+P +   A D  WRVR  + + +  L   +G E    +L       L D   
Sbjct: 146 HEDKDSILMPTVKSAAYDKSWRVRYMVADKITELQKAVGPEITKTELVPAFQVLLKDCEA 205

Query: 414 AIREAATLNLKKLVE 458
            +R AA   +K+  E
Sbjct: 206 EVRAAAAGKVKEFSE 220



 Score = 32.7 bits (71), Expect = 0.34
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +1

Query: 16  TMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVR 189
           ++++P +K    D +  V+  +A  I  L   VG + T   L+P F   LKD   EVR
Sbjct: 151 SILMPTVKSAAYDKSWRVRYMVADKITELQKAVGPEITKTELVPAFQVLLKDCEAEVR 208



 Score = 31.5 bits (68), Expect = 0.77
 Identities = 20/73 (27%), Positives = 32/73 (43%)
 Frame = +3

Query: 255 LLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAAT 434
           L+P    L+ D +  VRL  +E+ P +A  L  E  D  L     S   D  + +R    
Sbjct: 114 LVPLFTNLSSDEQDSVRLLAVENCPQIAQVLPHEDKDSILMPTVKSAAYDKSWRVRYMVA 173

Query: 435 LNLKKLVEQYGPQ 473
             + +L +  GP+
Sbjct: 174 DKITELQKAVGPE 186



 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +3

Query: 534 VLLPTVLSMADDNVANVRFNVAKTLQIMAKYLDPAVIQPQVKPVLEKL 677
           +L+PTV S A D    VR+ VA  +  + K + P + + ++ P  + L
Sbjct: 152 ILMPTVKSAAYDKSWRVRYMVADKITELQKAVGPEITKTELVPAFQVL 199



 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = +3

Query: 513 GKDITTRVLLPTVLSMADDNVANVRFNVAKTLQIMAKYLDPAVIQPQVKPVLEKL 677
           GKD T   LLP  L+M  D    VR N+   L  + + +    +   + P + +L
Sbjct: 266 GKDNTIEHLLPLFLTMLKDEFPEVRLNIISNLDCVNQVIGVHQLSQSLLPAIVEL 320


>SB_43136| Best HMM Match : HEAT (HMM E-Value=1.7e-15)
          Length = 426

 Score =  137 bits (332), Expect = 8e-33
 Identities = 62/74 (83%), Positives = 70/74 (94%)
 Frame = +3

Query: 255 LLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAAT 434
           LLPAIVELAEDTKWRVRLAIIE+MPLLAGQLG +FFDEKL +LCMSWLVDHV +IREAA 
Sbjct: 28  LLPAIVELAEDTKWRVRLAIIEYMPLLAGQLGVDFFDEKLNTLCMSWLVDHVCSIREAAA 87

Query: 435 LNLKKLVEQYGPQW 476
           +NLKKLVE++GP+W
Sbjct: 88  INLKKLVEKFGPEW 101



 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 33/57 (57%), Positives = 44/57 (77%)
 Frame = +3

Query: 510 CGKDITTRVLLPTVLSMADDNVANVRFNVAKTLQIMAKYLDPAVIQPQVKPVLEKLN 680
           CG +  ++++LP VL++A DNVANVRFNVAKTLQ +   LD + IQ Q+KP L+KLN
Sbjct: 150 CGPENISKLMLPVVLNLATDNVANVRFNVAKTLQKIGPLLDASTIQAQIKPCLDKLN 206



 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 19/23 (82%), Positives = 22/23 (95%)
 Frame = +1

Query: 178 PEVRLNIISNLECVNEVIGIQQL 246
           PEVRLNIISNL+CVN+VIG+ QL
Sbjct: 2   PEVRLNIISNLDCVNQVIGVHQL 24


>SB_41601| Best HMM Match : zf-C2H2 (HMM E-Value=0.0019)
          Length = 1008

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = -2

Query: 414 RTRGPPATT--CTSWSASRRRTPGPAVPPVEACA-R*WPDGPSTWCPLPAPRWRGGGLHQ 244
           RT  PP +     SW+ S R    PA PPV A   +  P  P    P+  P   G GL Q
Sbjct: 49  RTPTPPMSVQNAPSWNQSPRLGMSPARPPVPAGQYQGTPRAPLNQAPVRRPFMPGQGLQQ 108

Query: 243 L 241
           +
Sbjct: 109 M 109


>SB_58281| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 604

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 21/65 (32%), Positives = 28/65 (43%)
 Frame = -3

Query: 353 LAQLSRQ*RHVLDDGQTDPPLGVLCQLHDGGEEDCTSCWMPITSFTHSRLEIMLSRTSGH 174
           L  ++R  RH+ +D Q D  +     LHD      TS       F    LEI+    +G 
Sbjct: 208 LQNITRTSRHIAEDSQVDV-IHSDKVLHDASNSSRTS-----KIFNKDNLEILAETLTGE 261

Query: 173 SSFSC 159
           SSF C
Sbjct: 262 SSFEC 266


>SB_48878| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
          Length = 1213

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 278 QLHDGGEEDCTSCWMPITSFTHSRLEIMLSRTS 180
           +LH    +D  +CW P ++ T   L+IMLS  S
Sbjct: 158 RLHLQASKDNDACWCPDSADTEKSLDIMLSERS 190


>SB_50016| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2065

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 522 ITTRVLLPTVLSMADDNVANVRFNVAKTLQIMAKYLDPAVIQ 647
           +TT  LL T L   DDN+  V+ N    + I   YL  + +Q
Sbjct: 328 LTTSNLLATDLDSPDDNLTEVKLNQGSRVLITTDYLTASDLQ 369


>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1011

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/41 (36%), Positives = 17/41 (41%)
 Frame = -2

Query: 414 RTRGPPATTCTSWSASRRRTPGPAVPPVEACAR*WPDGPST 292
           RT   P+T CT  + S   TP     P   C    P  PST
Sbjct: 31  RTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTHSTPSAPST 71


>SB_59449| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 247

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 87  RHHGPEPHSGQTEHY*TSPAAVPHTTEG*MSRSPTQH 197
           +  GP P    T+    SP  VPH T+G   + P+QH
Sbjct: 156 QRQGPRPVPDPTDGQRPSPRPVPHPTDG---QRPSQH 189


>SB_58065| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 600

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +1

Query: 34  IKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLP--LFLTQLKDECP 180
           +KD+V  + Q+VK      ++GLS  VG+ +   + LP  L+  Q   E P
Sbjct: 50  VKDIVMQSLQYVKLGKKKQLIGLSGFVGKHDENNNELPTNLYAQQWTLELP 100


>SB_43647| Best HMM Match : VPS9 (HMM E-Value=1.1e-12)
          Length = 849

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 528 TRVLLPTVLSMADDNVANVRFNVAKTLQIMAKYLDPAVIQPQ 653
           T +L+P+  S A  +++ VR N      I  K L+ + + PQ
Sbjct: 542 TAILIPSAESTAKVSISTVRLNTRTLSPIQLKTLEESFLHPQ 583


>SB_14574| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 124

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 87  RHHGPEPHSGQTEHY*TSPAAVPHTTEG*MSRSPTQH 197
           +  GP P    T+    SP  VPH T+G   + P+QH
Sbjct: 33  QRQGPRPVPDPTDGQRPSPRPVPHPTDG---QRPSQH 66


>SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17)
          Length = 722

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = +3

Query: 240 TAGAVLLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAI 419
           T    ++P +VEL  D +  VRL+ +E +  L   L    FDE    +   W +D+   I
Sbjct: 34  TTKTSVIPELVELTNDEETSVRLSGMETITNLLNLLDDVNFDE----VQKKWFLDYYRRI 89

Query: 420 REAATLN 440
            +  + N
Sbjct: 90  SKCGSPN 96


>SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)
          Length = 245

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 10/75 (13%)
 Frame = +2

Query: 254 PPPRHRGAGRGHQVEGPSGHHRAHAST---GGTAGPGVLRREADQLVHVVAGG------- 403
           PPP H   G G+  + P G   ++ ST   GG+  PG       Q      G        
Sbjct: 111 PPPGHPPMGGGYPGQQPGGPPPSYDSTMQQGGSYPPGQQPYPGQQAYPGQPGASPQGQPY 170

Query: 404 PRVRHPRGCDPQPEE 448
           P   +P+G +P PE+
Sbjct: 171 PGQSYPQGQEPYPEK 185


>SB_1052| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1092

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 20/65 (30%), Positives = 25/65 (38%)
 Frame = -3

Query: 299 PPLGVLCQLHDGGEEDCTSCWMPITSFTHSRLEIMLSRTSGHSSFSCVRNSGRRCSIVFC 120
           P  G+ C   DG +  C     P T     R E     T   S   C    G +CS+V+C
Sbjct: 764 PGQGLKC-CKDGCDFRCVPPIPPPTPPPQRRSESRSLATLQPSLVYCTPIKGCQCSLVYC 822

Query: 119 LPTMG 105
            P  G
Sbjct: 823 TPIKG 827


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,834,479
Number of Sequences: 59808
Number of extensions: 602580
Number of successful extensions: 1821
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1815
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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