BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0277 (769 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_29772| Best HMM Match : HEAT (HMM E-Value=1.54143e-44) 138 5e-33 SB_43136| Best HMM Match : HEAT (HMM E-Value=1.7e-15) 137 8e-33 SB_41601| Best HMM Match : zf-C2H2 (HMM E-Value=0.0019) 31 1.4 SB_58281| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8 SB_48878| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 29 3.1 SB_50016| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1 SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5 SB_59449| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2 SB_58065| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2 SB_43647| Best HMM Match : VPS9 (HMM E-Value=1.1e-12) 28 7.2 SB_14574| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2 SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17) 28 9.5 SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 28 9.5 SB_1052| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5 >SB_29772| Best HMM Match : HEAT (HMM E-Value=1.54143e-44) Length = 405 Score = 138 bits (334), Expect = 5e-33 Identities = 63/77 (81%), Positives = 71/77 (92%) Frame = +3 Query: 255 LLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAAT 434 LLPAIVELAEDTKWRVRLAIIE+MPLLAGQLG +FFDEKL +LCMSWLVDHV +IREAA Sbjct: 313 LLPAIVELAEDTKWRVRLAIIEYMPLLAGQLGVDFFDEKLNTLCMSWLVDHVCSIREAAA 372 Query: 435 LNLKKLVEQYGPQWVLV 485 +NLKKLVE++GP+W V Sbjct: 373 INLKKLVEKFGPEWAQV 389 Score = 135 bits (326), Expect = 4e-32 Identities = 63/82 (76%), Positives = 73/82 (89%) Frame = +1 Query: 1 EHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECP 180 E ++MT ILP +K+LV D NQHVKSALASVIMGLSP++G+ NTIEHLLPLFLT LKDE P Sbjct: 228 ESVLMTNILPCVKELVIDPNQHVKSALASVIMGLSPLLGKDNTIEHLLPLFLTMLKDEFP 287 Query: 181 EVRLNIISNLECVNEVIGIQQL 246 EVRLNIISNL+CVN+VIG+ QL Sbjct: 288 EVRLNIISNLDCVNQVIGVHQL 309 Score = 34.7 bits (76), Expect = 0.083 Identities = 20/75 (26%), Positives = 32/75 (42%) Frame = +3 Query: 234 HPTAGAVLLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVY 413 H ++L+P + A D WRVR + + + L +G E +L L D Sbjct: 146 HEDKDSILMPTVKSAAYDKSWRVRYMVADKITELQKAVGPEITKTELVPAFQVLLKDCEA 205 Query: 414 AIREAATLNLKKLVE 458 +R AA +K+ E Sbjct: 206 EVRAAAAGKVKEFSE 220 Score = 32.7 bits (71), Expect = 0.34 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = +1 Query: 16 TMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVR 189 ++++P +K D + V+ +A I L VG + T L+P F LKD EVR Sbjct: 151 SILMPTVKSAAYDKSWRVRYMVADKITELQKAVGPEITKTELVPAFQVLLKDCEAEVR 208 Score = 31.5 bits (68), Expect = 0.77 Identities = 20/73 (27%), Positives = 32/73 (43%) Frame = +3 Query: 255 LLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAAT 434 L+P L+ D + VRL +E+ P +A L E D L S D + +R Sbjct: 114 LVPLFTNLSSDEQDSVRLLAVENCPQIAQVLPHEDKDSILMPTVKSAAYDKSWRVRYMVA 173 Query: 435 LNLKKLVEQYGPQ 473 + +L + GP+ Sbjct: 174 DKITELQKAVGPE 186 Score = 30.7 bits (66), Expect = 1.4 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = +3 Query: 534 VLLPTVLSMADDNVANVRFNVAKTLQIMAKYLDPAVIQPQVKPVLEKL 677 +L+PTV S A D VR+ VA + + K + P + + ++ P + L Sbjct: 152 ILMPTVKSAAYDKSWRVRYMVADKITELQKAVGPEITKTELVPAFQVL 199 Score = 30.7 bits (66), Expect = 1.4 Identities = 16/55 (29%), Positives = 25/55 (45%) Frame = +3 Query: 513 GKDITTRVLLPTVLSMADDNVANVRFNVAKTLQIMAKYLDPAVIQPQVKPVLEKL 677 GKD T LLP L+M D VR N+ L + + + + + P + +L Sbjct: 266 GKDNTIEHLLPLFLTMLKDEFPEVRLNIISNLDCVNQVIGVHQLSQSLLPAIVEL 320 >SB_43136| Best HMM Match : HEAT (HMM E-Value=1.7e-15) Length = 426 Score = 137 bits (332), Expect = 8e-33 Identities = 62/74 (83%), Positives = 70/74 (94%) Frame = +3 Query: 255 LLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAAT 434 LLPAIVELAEDTKWRVRLAIIE+MPLLAGQLG +FFDEKL +LCMSWLVDHV +IREAA Sbjct: 28 LLPAIVELAEDTKWRVRLAIIEYMPLLAGQLGVDFFDEKLNTLCMSWLVDHVCSIREAAA 87 Query: 435 LNLKKLVEQYGPQW 476 +NLKKLVE++GP+W Sbjct: 88 INLKKLVEKFGPEW 101 Score = 72.9 bits (171), Expect = 3e-13 Identities = 33/57 (57%), Positives = 44/57 (77%) Frame = +3 Query: 510 CGKDITTRVLLPTVLSMADDNVANVRFNVAKTLQIMAKYLDPAVIQPQVKPVLEKLN 680 CG + ++++LP VL++A DNVANVRFNVAKTLQ + LD + IQ Q+KP L+KLN Sbjct: 150 CGPENISKLMLPVVLNLATDNVANVRFNVAKTLQKIGPLLDASTIQAQIKPCLDKLN 206 Score = 45.2 bits (102), Expect = 6e-05 Identities = 19/23 (82%), Positives = 22/23 (95%) Frame = +1 Query: 178 PEVRLNIISNLECVNEVIGIQQL 246 PEVRLNIISNL+CVN+VIG+ QL Sbjct: 2 PEVRLNIISNLDCVNQVIGVHQL 24 >SB_41601| Best HMM Match : zf-C2H2 (HMM E-Value=0.0019) Length = 1008 Score = 30.7 bits (66), Expect = 1.4 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Frame = -2 Query: 414 RTRGPPATT--CTSWSASRRRTPGPAVPPVEACA-R*WPDGPSTWCPLPAPRWRGGGLHQ 244 RT PP + SW+ S R PA PPV A + P P P+ P G GL Q Sbjct: 49 RTPTPPMSVQNAPSWNQSPRLGMSPARPPVPAGQYQGTPRAPLNQAPVRRPFMPGQGLQQ 108 Query: 243 L 241 + Sbjct: 109 M 109 >SB_58281| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 604 Score = 30.3 bits (65), Expect = 1.8 Identities = 21/65 (32%), Positives = 28/65 (43%) Frame = -3 Query: 353 LAQLSRQ*RHVLDDGQTDPPLGVLCQLHDGGEEDCTSCWMPITSFTHSRLEIMLSRTSGH 174 L ++R RH+ +D Q D + LHD TS F LEI+ +G Sbjct: 208 LQNITRTSRHIAEDSQVDV-IHSDKVLHDASNSSRTS-----KIFNKDNLEILAETLTGE 261 Query: 173 SSFSC 159 SSF C Sbjct: 262 SSFEC 266 >SB_48878| Best HMM Match : Fibrinogen_C (HMM E-Value=0) Length = 1213 Score = 29.5 bits (63), Expect = 3.1 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -3 Query: 278 QLHDGGEEDCTSCWMPITSFTHSRLEIMLSRTS 180 +LH +D +CW P ++ T L+IMLS S Sbjct: 158 RLHLQASKDNDACWCPDSADTEKSLDIMLSERS 190 >SB_50016| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2065 Score = 29.1 bits (62), Expect = 4.1 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +3 Query: 522 ITTRVLLPTVLSMADDNVANVRFNVAKTLQIMAKYLDPAVIQ 647 +TT LL T L DDN+ V+ N + I YL + +Q Sbjct: 328 LTTSNLLATDLDSPDDNLTEVKLNQGSRVLITTDYLTASDLQ 369 >SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1011 Score = 28.7 bits (61), Expect = 5.5 Identities = 15/41 (36%), Positives = 17/41 (41%) Frame = -2 Query: 414 RTRGPPATTCTSWSASRRRTPGPAVPPVEACAR*WPDGPST 292 RT P+T CT + S TP P C P PST Sbjct: 31 RTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTHSTPSAPST 71 >SB_59449| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 247 Score = 28.3 bits (60), Expect = 7.2 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +3 Query: 87 RHHGPEPHSGQTEHY*TSPAAVPHTTEG*MSRSPTQH 197 + GP P T+ SP VPH T+G + P+QH Sbjct: 156 QRQGPRPVPDPTDGQRPSPRPVPHPTDG---QRPSQH 189 >SB_58065| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 600 Score = 28.3 bits (60), Expect = 7.2 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Frame = +1 Query: 34 IKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLP--LFLTQLKDECP 180 +KD+V + Q+VK ++GLS VG+ + + LP L+ Q E P Sbjct: 50 VKDIVMQSLQYVKLGKKKQLIGLSGFVGKHDENNNELPTNLYAQQWTLELP 100 >SB_43647| Best HMM Match : VPS9 (HMM E-Value=1.1e-12) Length = 849 Score = 28.3 bits (60), Expect = 7.2 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = +3 Query: 528 TRVLLPTVLSMADDNVANVRFNVAKTLQIMAKYLDPAVIQPQ 653 T +L+P+ S A +++ VR N I K L+ + + PQ Sbjct: 542 TAILIPSAESTAKVSISTVRLNTRTLSPIQLKTLEESFLHPQ 583 >SB_14574| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 124 Score = 28.3 bits (60), Expect = 7.2 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +3 Query: 87 RHHGPEPHSGQTEHY*TSPAAVPHTTEG*MSRSPTQH 197 + GP P T+ SP VPH T+G + P+QH Sbjct: 33 QRQGPRPVPDPTDGQRPSPRPVPHPTDG---QRPSQH 66 >SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17) Length = 722 Score = 27.9 bits (59), Expect = 9.5 Identities = 19/67 (28%), Positives = 31/67 (46%) Frame = +3 Query: 240 TAGAVLLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAI 419 T ++P +VEL D + VRL+ +E + L L FDE + W +D+ I Sbjct: 34 TTKTSVIPELVELTNDEETSVRLSGMETITNLLNLLDDVNFDE----VQKKWFLDYYRRI 89 Query: 420 REAATLN 440 + + N Sbjct: 90 SKCGSPN 96 >SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) Length = 245 Score = 27.9 bits (59), Expect = 9.5 Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 10/75 (13%) Frame = +2 Query: 254 PPPRHRGAGRGHQVEGPSGHHRAHAST---GGTAGPGVLRREADQLVHVVAGG------- 403 PPP H G G+ + P G ++ ST GG+ PG Q G Sbjct: 111 PPPGHPPMGGGYPGQQPGGPPPSYDSTMQQGGSYPPGQQPYPGQQAYPGQPGASPQGQPY 170 Query: 404 PRVRHPRGCDPQPEE 448 P +P+G +P PE+ Sbjct: 171 PGQSYPQGQEPYPEK 185 >SB_1052| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1092 Score = 27.9 bits (59), Expect = 9.5 Identities = 20/65 (30%), Positives = 25/65 (38%) Frame = -3 Query: 299 PPLGVLCQLHDGGEEDCTSCWMPITSFTHSRLEIMLSRTSGHSSFSCVRNSGRRCSIVFC 120 P G+ C DG + C P T R E T S C G +CS+V+C Sbjct: 764 PGQGLKC-CKDGCDFRCVPPIPPPTPPPQRRSESRSLATLQPSLVYCTPIKGCQCSLVYC 822 Query: 119 LPTMG 105 P G Sbjct: 823 TPIKG 827 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 25,834,479 Number of Sequences: 59808 Number of extensions: 602580 Number of successful extensions: 1821 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1608 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1815 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2083999566 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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