Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0277
         (769 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    26   1.1  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    25   1.9  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    25   1.9  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   4.5  

>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 334 SRGMCSMMARRTLHLVSSASSTMAGRRTAPAV 239
           S G C++  R T+ +V    S  +  RTA A+
Sbjct: 214 SIGHCTLYTRMTIEMVEQLESMASAERTASAI 245


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -3

Query: 593 IEPHVGNIVVGHRQHGRQQHPGRDVLAAPSDSTLMQNKY 477
           + PHV   + G R   R Q  G DVL   SD  L + ++
Sbjct: 246 LTPHVERYLDGFRSGFRDQLRGADVLFMQSDGGLTRMEH 284


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -3

Query: 593 IEPHVGNIVVGHRQHGRQQHPGRDVLAAPSDSTLMQNKY 477
           + PHV   + G R   R Q  G DVL   SD  L + ++
Sbjct: 246 LTPHVERYLDGFRSGFRDQLRGADVLFMQSDGGLTRMEH 284


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 13/45 (28%), Positives = 19/45 (42%)
 Frame = -1

Query: 382 KLVSFSSKNSWPSCPASRGMCSMMARRTLHLVSSASSTMAGRRTA 248
           KL+     N W S P + G    + R    L+SS  S +   + A
Sbjct: 50  KLIQSMRTNRWSSHPEAPGKAIYLTRMDRSLLSSMVSNLTDLQVA 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 858,337
Number of Sequences: 2352
Number of extensions: 20794
Number of successful extensions: 102
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 102
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)