Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0273
         (760 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D50912-1|BAA09471.1| 1010|Homo sapiens KIAA0122 protein.               38   0.030
BX537969-1|CAD97933.1|  995|Homo sapiens hypothetical protein pr...    38   0.030
BC024153-1|AAH24153.1|  930|Homo sapiens RNA binding motif prote...    38   0.030
BC008733-1|AAH08733.1|  930|Homo sapiens RNA binding motif prote...    38   0.030
BC004181-1|AAH04181.1|  930|Homo sapiens RNA binding motif prote...    38   0.030
BC003089-1|AAH03089.1|  852|Homo sapiens RNA binding motif prote...    38   0.030
BC000681-1|AAH00681.1|  541|Homo sapiens RBM10 protein protein.        38   0.030
AL513366-5|CAI41701.1|  930|Homo sapiens RNA binding motif prote...    38   0.030
AL513366-4|CAI41700.1|  853|Homo sapiens RNA binding motif prote...    38   0.030
AK222858-1|BAD96578.1|  330|Homo sapiens zinc finger protein 265...    33   0.85 
BC039814-1|AAH39814.1|  320|Homo sapiens zinc finger, RAN-bindin...    32   2.6  
AL512443-2|CAH70059.1|  320|Homo sapiens zinc finger, RAN-bindin...    32   2.6  
AL512443-1|CAH70058.1|  330|Homo sapiens zinc finger, RAN-bindin...    32   2.6  
AL136945-1|CAB66879.1|  311|Homo sapiens hypothetical protein pr...    32   2.6  
AF065392-1|AAD09747.1|  311|Homo sapiens ZIS2 protein.                 32   2.6  
AF065391-1|AAD09746.1|  337|Homo sapiens ZIS1 protein.                 32   2.6  
AB209568-1|BAD92805.1|  316|Homo sapiens zinc finger protein 265...    32   2.6  

>D50912-1|BAA09471.1| 1010|Homo sapiens KIAA0122 protein.
          Length = 1010

 Score = 38.3 bits (85), Expect = 0.030
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 497 RITGDWIC-KCGLYNFKRRQVCYRRTCNGKRSE 592
           +I  DW+C KCG+ NFKRR+ C++  C   +SE
Sbjct: 293 KINEDWLCNKCGVQNFKRREKCFK--CGVPKSE 323


>BX537969-1|CAD97933.1|  995|Homo sapiens hypothetical protein
           protein.
          Length = 995

 Score = 38.3 bits (85), Expect = 0.030
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 497 RITGDWIC-KCGLYNFKRRQVCYRRTCNGKRSE 592
           +I  DW+C KCG+ NFKRR+ C++  C   +SE
Sbjct: 277 KINEDWLCNKCGVQNFKRREKCFK--CGVPKSE 307


>BC024153-1|AAH24153.1|  930|Homo sapiens RNA binding motif protein
           10 protein.
          Length = 930

 Score = 38.3 bits (85), Expect = 0.030
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 497 RITGDWIC-KCGLYNFKRRQVCYRRTCNGKRSE 592
           +I  DW+C KCG+ NFKRR+ C++  C   +SE
Sbjct: 212 KINEDWLCNKCGVQNFKRREKCFK--CGVPKSE 242


>BC008733-1|AAH08733.1|  930|Homo sapiens RNA binding motif protein
           10 protein.
          Length = 930

 Score = 38.3 bits (85), Expect = 0.030
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 497 RITGDWIC-KCGLYNFKRRQVCYRRTCNGKRSE 592
           +I  DW+C KCG+ NFKRR+ C++  C   +SE
Sbjct: 212 KINEDWLCNKCGVQNFKRREKCFK--CGVPKSE 242


>BC004181-1|AAH04181.1|  930|Homo sapiens RNA binding motif protein
           10 protein.
          Length = 930

 Score = 38.3 bits (85), Expect = 0.030
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 497 RITGDWIC-KCGLYNFKRRQVCYRRTCNGKRSE 592
           +I  DW+C KCG+ NFKRR+ C++  C   +SE
Sbjct: 212 KINEDWLCNKCGVQNFKRREKCFK--CGVPKSE 242


>BC003089-1|AAH03089.1|  852|Homo sapiens RNA binding motif protein
           10 protein.
          Length = 852

 Score = 38.3 bits (85), Expect = 0.030
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 497 RITGDWIC-KCGLYNFKRRQVCYRRTCNGKRSE 592
           +I  DW+C KCG+ NFKRR+ C++  C   +SE
Sbjct: 135 KINEDWLCNKCGVQNFKRREKCFK--CGVPKSE 165


>BC000681-1|AAH00681.1|  541|Homo sapiens RBM10 protein protein.
          Length = 541

 Score = 38.3 bits (85), Expect = 0.030
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 497 RITGDWIC-KCGLYNFKRRQVCYRRTCNGKRSE 592
           +I  DW+C KCG+ NFKRR+ C++  C   +SE
Sbjct: 84  KINEDWLCNKCGVQNFKRREKCFK--CGVPKSE 114


>AL513366-5|CAI41701.1|  930|Homo sapiens RNA binding motif protein
           10 protein.
          Length = 930

 Score = 38.3 bits (85), Expect = 0.030
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 497 RITGDWIC-KCGLYNFKRRQVCYRRTCNGKRSE 592
           +I  DW+C KCG+ NFKRR+ C++  C   +SE
Sbjct: 212 KINEDWLCNKCGVQNFKRREKCFK--CGVPKSE 242


>AL513366-4|CAI41700.1|  853|Homo sapiens RNA binding motif protein
           10 protein.
          Length = 853

 Score = 38.3 bits (85), Expect = 0.030
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 497 RITGDWIC-KCGLYNFKRRQVCYRRTCNGKRSE 592
           +I  DW+C KCG+ NFKRR+ C++  C   +SE
Sbjct: 135 KINEDWLCNKCGVQNFKRREKCFK--CGVPKSE 165


>AK222858-1|BAD96578.1|  330|Homo sapiens zinc finger protein 265
           isoform 1 variant protein.
          Length = 330

 Score = 33.5 bits (73), Expect = 0.85
 Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +2

Query: 506 GDWIC---KCGLYNFKRRQVCYRRTCNGKRSEGVFMEVMG 616
           GDWIC   KCG  NF RR  C R  C  +++ G  M   G
Sbjct: 11  GDWICPDKKCGNVNFARRTSCNR--CGREKTTGAKMMKAG 48


>BC039814-1|AAH39814.1|  320|Homo sapiens zinc finger, RAN-binding
           domain containing 2 protein.
          Length = 320

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +2

Query: 506 GDWIC---KCGLYNFKRRQVCYRRTCNGKRSEGVFMEVMG 616
           GDWIC   KCG  NF RR  C  R    K +E   M+  G
Sbjct: 11  GDWICPDKKCGNVNFARRTSC-NRCGREKTTEAKMMKAGG 49


>AL512443-2|CAH70059.1|  320|Homo sapiens zinc finger, RAN-binding
           domain containing 2 protein.
          Length = 320

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +2

Query: 506 GDWIC---KCGLYNFKRRQVCYRRTCNGKRSEGVFMEVMG 616
           GDWIC   KCG  NF RR  C  R    K +E   M+  G
Sbjct: 11  GDWICPDKKCGNVNFARRTSC-NRCGREKTTEAKMMKAGG 49


>AL512443-1|CAH70058.1|  330|Homo sapiens zinc finger, RAN-binding
           domain containing 2 protein.
          Length = 330

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +2

Query: 506 GDWIC---KCGLYNFKRRQVCYRRTCNGKRSEGVFMEVMG 616
           GDWIC   KCG  NF RR  C  R    K +E   M+  G
Sbjct: 11  GDWICPDKKCGNVNFARRTSC-NRCGREKTTEAKMMKAGG 49


>AL136945-1|CAB66879.1|  311|Homo sapiens hypothetical protein
           protein.
          Length = 311

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +2

Query: 506 GDWIC---KCGLYNFKRRQVCYRRTCNGKRSEGVFMEVMG 616
           GDWIC   KCG  NF RR  C  R    K +E   M+  G
Sbjct: 11  GDWICPDKKCGNVNFARRTSC-NRCGREKTTEAKMMKAGG 49


>AF065392-1|AAD09747.1|  311|Homo sapiens ZIS2 protein.
          Length = 311

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +2

Query: 506 GDWIC---KCGLYNFKRRQVCYRRTCNGKRSEGVFMEVMG 616
           GDWIC   KCG  NF RR  C  R    K +E   M+  G
Sbjct: 11  GDWICPDKKCGNVNFARRTSC-NRCGREKTTEAKMMKAGG 49


>AF065391-1|AAD09746.1|  337|Homo sapiens ZIS1 protein.
          Length = 337

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +2

Query: 506 GDWIC---KCGLYNFKRRQVCYRRTCNGKRSEGVFMEVMG 616
           GDWIC   KCG  NF RR  C  R    K +E   M+  G
Sbjct: 11  GDWICPDKKCGNVNFARRTSC-NRCGREKTTEAKMMKAGG 49


>AB209568-1|BAD92805.1|  316|Homo sapiens zinc finger protein 265
           isoform 1 variant protein.
          Length = 316

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +2

Query: 506 GDWIC---KCGLYNFKRRQVCYRRTCNGKRSEGVFMEVMG 616
           GDWIC   KCG  NF RR  C  R    K +E   M+  G
Sbjct: 13  GDWICPDKKCGNVNFARRTSC-NRCGREKTTEAKMMKAGG 51


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,261,568
Number of Sequences: 237096
Number of extensions: 1730077
Number of successful extensions: 4839
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4839
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)