BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0273
(760 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT010292-1|AAQ23610.1| 662|Drosophila melanogaster LD16296p pro... 37 0.034
BT001262-1|AAN71018.1| 833|Drosophila melanogaster AT02677p pro... 37 0.034
AE014134-226|AAF51398.3| 662|Drosophila melanogaster CG4896-PB,... 37 0.034
AE014134-225|AAF51399.3| 662|Drosophila melanogaster CG4896-PA,... 37 0.034
AE014134-224|AAN10483.2| 949|Drosophila melanogaster CG4896-PD,... 37 0.034
AE014134-223|AAN10482.2| 968|Drosophila melanogaster CG4896-PC,... 37 0.034
BT011123-1|AAR82790.1| 887|Drosophila melanogaster LD09721p pro... 29 9.1
AY070653-1|AAL48124.1| 1004|Drosophila melanogaster RH03791p pro... 29 9.1
AF215703-1|AAF43004.1| 5322|Drosophila melanogaster KISMET-L lon... 29 9.1
AF113847-1|AAD37500.1| 2151|Drosophila melanogaster kismet protein. 29 9.1
AE014134-222|AAF51400.1| 1004|Drosophila melanogaster CG4887-PA ... 29 9.1
AE014134-63|AAF51530.1| 2151|Drosophila melanogaster CG3696-PB, ... 29 9.1
AE014134-62|AAF51527.3| 5322|Drosophila melanogaster CG3696-PA, ... 29 9.1
>BT010292-1|AAQ23610.1| 662|Drosophila melanogaster LD16296p
protein.
Length = 662
Score = 36.7 bits (81), Expect = 0.034
Identities = 17/29 (58%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 509 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 592
DW C KCG NFKRR CY CN R+E
Sbjct: 10 DWTCIKCGASNFKRRFQCY--MCNASRAE 36
>BT001262-1|AAN71018.1| 833|Drosophila melanogaster AT02677p
protein.
Length = 833
Score = 36.7 bits (81), Expect = 0.034
Identities = 17/29 (58%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 509 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 592
DW C KCG NFKRR CY CN R+E
Sbjct: 181 DWTCIKCGASNFKRRFQCY--MCNASRAE 207
>AE014134-226|AAF51398.3| 662|Drosophila melanogaster CG4896-PB,
isoform B protein.
Length = 662
Score = 36.7 bits (81), Expect = 0.034
Identities = 17/29 (58%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 509 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 592
DW C KCG NFKRR CY CN R+E
Sbjct: 10 DWTCIKCGASNFKRRFQCY--MCNASRAE 36
>AE014134-225|AAF51399.3| 662|Drosophila melanogaster CG4896-PA,
isoform A protein.
Length = 662
Score = 36.7 bits (81), Expect = 0.034
Identities = 17/29 (58%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 509 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 592
DW C KCG NFKRR CY CN R+E
Sbjct: 10 DWTCIKCGASNFKRRFQCY--MCNASRAE 36
>AE014134-224|AAN10483.2| 949|Drosophila melanogaster CG4896-PD,
isoform D protein.
Length = 949
Score = 36.7 bits (81), Expect = 0.034
Identities = 17/29 (58%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 509 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 592
DW C KCG NFKRR CY CN R+E
Sbjct: 297 DWTCIKCGASNFKRRFQCY--MCNASRAE 323
>AE014134-223|AAN10482.2| 968|Drosophila melanogaster CG4896-PC,
isoform C protein.
Length = 968
Score = 36.7 bits (81), Expect = 0.034
Identities = 17/29 (58%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 509 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 592
DW C KCG NFKRR CY CN R+E
Sbjct: 316 DWTCIKCGASNFKRRFQCY--MCNASRAE 342
>BT011123-1|AAR82790.1| 887|Drosophila melanogaster LD09721p
protein.
Length = 887
Score = 28.7 bits (61), Expect = 9.1
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = -2
Query: 327 GHGRDPGRGGHAESRARDEAVYHAMSVSGWRPALRADVPRLPYRRPIAEFPFVGVPPRAA 148
G + R A S A D+A S++G P+L A++P L P + P P+
Sbjct: 45 GSSKKNSRQQTAASAALDQAALQFGSLAGLNPSLLANLPGLGAFDP--KNPLAAFDPKNP 102
Query: 147 LLSTS 133
LLS S
Sbjct: 103 LLSMS 107
>AY070653-1|AAL48124.1| 1004|Drosophila melanogaster RH03791p
protein.
Length = 1004
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 509 DWIC-KCGLYNFKRRQVCYRRTCNGKRSEGVF 601
DW C KCG+ NFK R C+ + + SE F
Sbjct: 341 DWNCYKCGVCNFKFRFYCFVCKTSREDSETTF 372
>AF215703-1|AAF43004.1| 5322|Drosophila melanogaster KISMET-L long
isoform protein.
Length = 5322
Score = 28.7 bits (61), Expect = 9.1
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = -2
Query: 327 GHGRDPGRGGHAESRARDEAVYHAMSVSGWRPALRADVPRLPYRRPIAEFPFVGVPPRAA 148
G + R A S A D+A S++G P+L A++P L P + P P+
Sbjct: 4480 GSSKKNSRQQTAASAALDQAALQFGSLAGLNPSLLANLPGLGAFDP--KNPLAAFDPKNP 4537
Query: 147 LLSTS 133
LLS S
Sbjct: 4538 LLSMS 4542
>AF113847-1|AAD37500.1| 2151|Drosophila melanogaster kismet protein.
Length = 2151
Score = 28.7 bits (61), Expect = 9.1
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = -2
Query: 327 GHGRDPGRGGHAESRARDEAVYHAMSVSGWRPALRADVPRLPYRRPIAEFPFVGVPPRAA 148
G + R A S A D+A S++G P+L A++P L P + P P+
Sbjct: 1309 GSSKKNSRQQTAASAALDQAALQFGSLAGLNPSLLANLPGLGAFDP--KNPLAAFDPKNP 1366
Query: 147 LLSTS 133
LLS S
Sbjct: 1367 LLSMS 1371
>AE014134-222|AAF51400.1| 1004|Drosophila melanogaster CG4887-PA
protein.
Length = 1004
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 509 DWIC-KCGLYNFKRRQVCYRRTCNGKRSEGVF 601
DW C KCG+ NFK R C+ + + SE F
Sbjct: 341 DWNCNKCGVCNFKFRFYCFVCKTSREDSETTF 372
>AE014134-63|AAF51530.1| 2151|Drosophila melanogaster CG3696-PB,
isoform B protein.
Length = 2151
Score = 28.7 bits (61), Expect = 9.1
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = -2
Query: 327 GHGRDPGRGGHAESRARDEAVYHAMSVSGWRPALRADVPRLPYRRPIAEFPFVGVPPRAA 148
G + R A S A D+A S++G P+L A++P L P + P P+
Sbjct: 1309 GSSKKNSRQQTAASAALDQAALQFGSLAGLNPSLLANLPGLGAFDP--KNPLAAFDPKNP 1366
Query: 147 LLSTS 133
LLS S
Sbjct: 1367 LLSMS 1371
>AE014134-62|AAF51527.3| 5322|Drosophila melanogaster CG3696-PA,
isoform A protein.
Length = 5322
Score = 28.7 bits (61), Expect = 9.1
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = -2
Query: 327 GHGRDPGRGGHAESRARDEAVYHAMSVSGWRPALRADVPRLPYRRPIAEFPFVGVPPRAA 148
G + R A S A D+A S++G P+L A++P L P + P P+
Sbjct: 4480 GSSKKNSRQQTAASAALDQAALQFGSLAGLNPSLLANLPGLGAFDP--KNPLAAFDPKNP 4537
Query: 147 LLSTS 133
LLS S
Sbjct: 4538 LLSMS 4542
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,276,182
Number of Sequences: 53049
Number of extensions: 552838
Number of successful extensions: 1571
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1569
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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