Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0272
(716 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC084553-1|AAH84553.1| 371|Homo sapiens glutamate receptor, ion... 107 4e-23
BC041788-1|AAH41788.2| 371|Homo sapiens glutamate receptor, ion... 107 4e-23
AB097026-1|BAC77379.1| 371|Homo sapiens putative MAPK activatin... 107 4e-23
U44954-1|AAB94292.1| 208|Homo sapiens NMDA receptor glutamate-b... 87 6e-17
BC000051-1|AAH00051.1| 316|Homo sapiens Fas apoptotic inhibitor... 71 6e-12
AB023167-1|BAA76794.1| 343|Homo sapiens KIAA0950 protein protein. 71 6e-12
AF190461-1|AAF06327.1| 316|Homo sapiens lifeguard protein. 68 3e-11
BC026693-1|AAH26693.1| 343|Homo sapiens TMBIM1 protein protein. 64 4e-10
BC026348-1|AAH26348.1| 311|Homo sapiens transmembrane BAX inhib... 64 4e-10
BC013428-1|AAH13428.1| 311|Homo sapiens transmembrane BAX inhib... 64 4e-10
BC007980-1|AAH07980.1| 311|Homo sapiens transmembrane BAX inhib... 64 4e-10
AK095270-1|BAC04516.1| 303|Homo sapiens protein ( Homo sapiens ... 64 4e-10
AF193045-1|AAG22473.1| 311|Homo sapiens unknown protein. 64 4e-10
AB257295-1|BAE93467.1| 311|Homo sapiens responsive to centrifug... 64 4e-10
AK075465-1|BAC11636.1| 137|Homo sapiens protein ( Homo sapiens ... 55 3e-07
AK027755-1|BAB55346.1| 137|Homo sapiens protein ( Homo sapiens ... 55 3e-07
AF182414-1|AAG14950.1| 284|Homo sapiens MDS013 protein. 52 3e-06
AK075069-1|BAC11384.1| 238|Homo sapiens protein ( Homo sapiens ... 49 2e-05
AF182041-1|AAG16898.1| 238|Homo sapiens z-protein protein. 49 2e-05
AF151877-1|AAD34114.1| 258|Homo sapiens CGI-119 protein protein. 49 2e-05
AF113127-1|AAF14868.1| 238|Homo sapiens S1R protein protein. 49 2e-05
BC064425-1|AAH64425.1| 343|Homo sapiens high mobility group AT-... 31 3.1
BC050666-1|AAH50666.1| 343|Homo sapiens ZNHIT4 protein protein. 31 3.1
AB054538-1|BAB21111.1| 343|Homo sapiens PAPA-1 protein. 31 3.1
AF490932-1|AAO11862.1| 111|Homo sapiens immunoglobulin kappa li... 31 5.4
U58048-1|AAC50775.1| 318|Homo sapiens PRSM1 protein. 30 9.5
M36067-1|AAA59518.1| 919|Homo sapiens LIG1 protein. 30 9.5
D38554-1|BAA07557.1| 268|Homo sapiens KIAA0047 protein. 30 9.5
BC110622-1|AAI10623.1| 801|Homo sapiens LIG1 protein protein. 30 9.5
BC108318-1|AAI08319.1| 919|Homo sapiens ligase I, DNA, ATP-depe... 30 9.5
AF527418-1|AAM77697.1| 919|Homo sapiens ligase I, DNA, ATP-depe... 30 9.5
AB208791-1|BAD92028.1| 832|Homo sapiens DNA ligase I variant pr... 30 9.5
>BC084553-1|AAH84553.1| 371|Homo sapiens glutamate receptor,
ionotropic, N-methyl D-asparate-associated protein 1
(gluta protein.
Length = 371
Score = 107 bits (257), Expect = 4e-23
Identities = 51/131 (38%), Positives = 82/131 (62%)
Frame = -3
Query: 678 KNPFMFWVAFIVLIVCLIAMACCPDVRRKSSDELHIPGHLHGSAELPARH*RKRLRRDAV 499
+N + ++V++ V + LI ++CC D RRK L L S +AV
Sbjct: 195 ENVWTYYVSYAVFFISLIVLSCCGDFRRKHPWNLVALSVLTASLSYMVGMIASFYNTEAV 254
Query: 498 LMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVAIFVKGKVITLVYAS 319
+MAVGIT AVC + +F++QT++DFT GVLL + +VL +F I+ IF++ +++ +VYAS
Sbjct: 255 IMAVGITTAVCFTVVIFSMQTRYDFTSCMGVLLVSMVVLFIFAILCIFIRNRILEIVYAS 314
Query: 318 LGALIFSIYLS 286
LGAL+F+ +L+
Sbjct: 315 LGALLFTCFLA 325
>BC041788-1|AAH41788.2| 371|Homo sapiens glutamate receptor,
ionotropic, N-methyl D-asparate-associated protein 1
(gluta protein.
Length = 371
Score = 107 bits (257), Expect = 4e-23
Identities = 51/131 (38%), Positives = 82/131 (62%)
Frame = -3
Query: 678 KNPFMFWVAFIVLIVCLIAMACCPDVRRKSSDELHIPGHLHGSAELPARH*RKRLRRDAV 499
+N + ++V++ V + LI ++CC D RRK L L S +AV
Sbjct: 195 ENVWTYYVSYAVFFISLIVLSCCGDFRRKHPWNLVALSVLTASLSYMVGMIASFYNTEAV 254
Query: 498 LMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVAIFVKGKVITLVYAS 319
+MAVGIT AVC + +F++QT++DFT GVLL + +VL +F I+ IF++ +++ +VYAS
Sbjct: 255 IMAVGITTAVCFTVVIFSMQTRYDFTSCMGVLLVSMVVLFIFAILCIFIRNRILEIVYAS 314
Query: 318 LGALIFSIYLS 286
LGAL+F+ +L+
Sbjct: 315 LGALLFTCFLA 325
>AB097026-1|BAC77379.1| 371|Homo sapiens putative MAPK activating
protein protein.
Length = 371
Score = 107 bits (257), Expect = 4e-23
Identities = 51/131 (38%), Positives = 82/131 (62%)
Frame = -3
Query: 678 KNPFMFWVAFIVLIVCLIAMACCPDVRRKSSDELHIPGHLHGSAELPARH*RKRLRRDAV 499
+N + ++V++ V + LI ++CC D RRK L L S +AV
Sbjct: 195 ENVWTYYVSYAVFFISLIVLSCCGDFRRKHPWNLVALSVLTASLSYMVGMIASFYNTEAV 254
Query: 498 LMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVAIFVKGKVITLVYAS 319
+MAVGIT AVC + +F++QT++DFT GVLL + +VL +F I+ IF++ +++ +VYAS
Sbjct: 255 IMAVGITTAVCFTVVIFSMQTRYDFTSCMGVLLVSMVVLFIFAILCIFIRNRILEIVYAS 314
Query: 318 LGALIFSIYLS 286
LGAL+F+ +L+
Sbjct: 315 LGALLFTCFLA 325
>U44954-1|AAB94292.1| 208|Homo sapiens NMDA receptor
glutamate-binding chain protein.
Length = 208
Score = 87.0 bits (206), Expect = 6e-17
Identities = 36/74 (48%), Positives = 58/74 (78%)
Frame = -3
Query: 507 DAVLMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVAIFVKGKVITLV 328
+AV+MAVGIT AVC + +F++QT++DFT GVLL + +VL +F I+ IF++ +++ +V
Sbjct: 35 EAVIMAVGITTAVCFTVVIFSMQTRYDFTSCMGVLLVSMVVLFIFAILCIFIRNRILEIV 94
Query: 327 YASLGALIFSIYLS 286
YASLG L+F+ +L+
Sbjct: 95 YASLGPLLFTCFLA 108
>BC000051-1|AAH00051.1| 316|Homo sapiens Fas apoptotic inhibitory
molecule 2 protein.
Length = 316
Score = 70.5 bits (165), Expect = 6e-12
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Frame = -3
Query: 675 NPFMFWVAFIVLIVCLIAMACCPDVRRKSSDELHIPGHLHGSAELPARH*RKRLRRDAVL 496
NP +W ++ V + +ACC RR L + S +VL
Sbjct: 137 NPGWYWASYAVFFATYLTLACCSGPRRHFPWNLILLTVFTLSMAYLTGMLSSYYNTTSVL 196
Query: 495 MAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFG-IVAIFVKGKVIT---LV 328
+ +GITA VCL +T+F+ QTK+DFT GVL + L G I+AI + + + V
Sbjct: 197 LCLGITALVCLSVTVFSFQTKFDFTSCQGVLFVLLMTLFFSGLILAILLPFQYVPWLHAV 256
Query: 327 YASLGALIFSIYLS 286
YA+LGA +F+++L+
Sbjct: 257 YAALGAGVFTLFLA 270
>AB023167-1|BAA76794.1| 343|Homo sapiens KIAA0950 protein protein.
Length = 343
Score = 70.5 bits (165), Expect = 6e-12
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Frame = -3
Query: 675 NPFMFWVAFIVLIVCLIAMACCPDVRRKSSDELHIPGHLHGSAELPARH*RKRLRRDAVL 496
NP +W ++ V + +ACC RR L + S +VL
Sbjct: 164 NPGWYWASYAVFFATYLTLACCSGPRRHFPWNLILLTVFTLSMAYLTGMLSSYYNTTSVL 223
Query: 495 MAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFG-IVAIFVKGKVIT---LV 328
+ +GITA VCL +T+F+ QTK+DFT GVL + L G I+AI + + + V
Sbjct: 224 LCLGITALVCLSVTVFSFQTKFDFTSCQGVLFVLLMTLFFSGLILAILLPFQYVPWLHAV 283
Query: 327 YASLGALIFSIYLS 286
YA+LGA +F+++L+
Sbjct: 284 YAALGAGVFTLFLA 297
>AF190461-1|AAF06327.1| 316|Homo sapiens lifeguard protein.
Length = 316
Score = 68.1 bits (159), Expect = 3e-11
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Frame = -3
Query: 672 PFMFWVAFIVLIVCLIAMACCPDVRRKSSDELHIPGHLHGSAELPARH*RKRLRRDAVLM 493
P +W ++ V + +ACC RR L + S +VL+
Sbjct: 138 PGWYWASYAVFFATYLTLACCSGPRRHFPWNLILLTVFTLSMAYLTGMLSSYYNTTSVLL 197
Query: 492 AVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFG-IVAIFVKGKVIT---LVY 325
+GITA VCL +T+F+ QTK+DFT GVL + L G I+AI + + + VY
Sbjct: 198 CLGITALVCLSVTVFSFQTKFDFTSCQGVLFVLLMTLFFSGLILAILLPFQYVPWLHAVY 257
Query: 324 ASLGALIFSIYLS 286
A+LGA +F+++L+
Sbjct: 258 AALGAGVFTLFLA 270
>BC026693-1|AAH26693.1| 343|Homo sapiens TMBIM1 protein protein.
Length = 343
Score = 64.5 bits (150), Expect = 4e-10
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Frame = -3
Query: 678 KNPFMFWVAFIVLIVCLIAMACCPDVRRKSSDELHIPGHLHGSAELPARH*RKRLRRDAV 499
+N +++V++ V +V + +ACC RR+ + + + + AV
Sbjct: 164 RNVAVYYVSYAVFVVTYLILACCQGPRRRFPWNIILLTLFTFAMGFMTGTISSMYQTKAV 223
Query: 498 LMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVA----IFVKGKVITL 331
++A+ ITA V + +T+F QTK DFT G+ IVLLV GIV F + +
Sbjct: 224 IIAMIITAVVSISVTIFCFQTKVDFTSCTGLFCVLGIVLLVTGIVTSIVLYFQYVYWLHM 283
Query: 330 VYASLGALIFSIYLS 286
+YA+LGA+ F+++L+
Sbjct: 284 LYAALGAICFTLFLA 298
>BC026348-1|AAH26348.1| 311|Homo sapiens transmembrane BAX
inhibitor motif containing 1 protein.
Length = 311
Score = 64.5 bits (150), Expect = 4e-10
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Frame = -3
Query: 678 KNPFMFWVAFIVLIVCLIAMACCPDVRRKSSDELHIPGHLHGSAELPARH*RKRLRRDAV 499
+N +++V++ V +V + +ACC RR+ + + + + AV
Sbjct: 132 RNVAVYYVSYAVFVVTYLILACCQGPRRRFPWNIILLTLFTFAMGFMTGTISSMYQTKAV 191
Query: 498 LMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVA----IFVKGKVITL 331
++A+ ITA V + +T+F QTK DFT G+ IVLLV GIV F + +
Sbjct: 192 IIAMIITAVVSISVTIFCFQTKVDFTSCTGLFCVLGIVLLVTGIVTSIVLYFQYVYWLHM 251
Query: 330 VYASLGALIFSIYLS 286
+YA+LGA+ F+++L+
Sbjct: 252 LYAALGAICFTLFLA 266
>BC013428-1|AAH13428.1| 311|Homo sapiens transmembrane BAX
inhibitor motif containing 1 protein.
Length = 311
Score = 64.5 bits (150), Expect = 4e-10
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Frame = -3
Query: 678 KNPFMFWVAFIVLIVCLIAMACCPDVRRKSSDELHIPGHLHGSAELPARH*RKRLRRDAV 499
+N +++V++ V +V + +ACC RR+ + + + + AV
Sbjct: 132 RNVAVYYVSYAVFVVTYLILACCQGPRRRFPWNIILLTLFTFAMGFMTGTISSMYQTKAV 191
Query: 498 LMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVA----IFVKGKVITL 331
++A+ ITA V + +T+F QTK DFT G+ IVLLV GIV F + +
Sbjct: 192 IIAMIITAVVSISVTIFCFQTKVDFTSCTGLFCVLGIVLLVTGIVTSIVLYFQYVYWLHM 251
Query: 330 VYASLGALIFSIYLS 286
+YA+LGA+ F+++L+
Sbjct: 252 LYAALGAICFTLFLA 266
>BC007980-1|AAH07980.1| 311|Homo sapiens transmembrane BAX
inhibitor motif containing 1 protein.
Length = 311
Score = 64.5 bits (150), Expect = 4e-10
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Frame = -3
Query: 678 KNPFMFWVAFIVLIVCLIAMACCPDVRRKSSDELHIPGHLHGSAELPARH*RKRLRRDAV 499
+N +++V++ V +V + +ACC RR+ + + + + AV
Sbjct: 132 RNVAVYYVSYAVFVVTYLILACCQGPRRRFPWNIILLTLFTFAMGFMTGTISSMYQTKAV 191
Query: 498 LMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVA----IFVKGKVITL 331
++A+ ITA V + +T+F QTK DFT G+ IVLLV GIV F + +
Sbjct: 192 IIAMIITAVVSISVTIFCFQTKVDFTSCTGLFCVLGIVLLVTGIVTSIVLYFQYVYWLHM 251
Query: 330 VYASLGALIFSIYLS 286
+YA+LGA+ F+++L+
Sbjct: 252 LYAALGAICFTLFLA 266
>AK095270-1|BAC04516.1| 303|Homo sapiens protein ( Homo sapiens
cDNA FLJ37951 fis, clone CTONG2009257, weakly similar to
Rattus norvegicus neural membrane protein 35 mRNA. ).
Length = 303
Score = 64.5 bits (150), Expect = 4e-10
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Frame = -3
Query: 678 KNPFMFWVAFIVLIVCLIAMACCPDVRRKSSDELHIPGHLHGSAELPARH*RKRLRRDAV 499
+N +++V++ V +V + +ACC RR+ + + + + AV
Sbjct: 124 RNVAVYYVSYAVFVVTYLILACCQGPRRRFPWNIILLTLFTFAMGFMTGTISSMYQTKAV 183
Query: 498 LMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVA----IFVKGKVITL 331
++A+ ITA V + +T+F QTK DFT G+ IVLLV GIV F + +
Sbjct: 184 IIAMIITAVVSISVTIFCFQTKVDFTSCTGLFCVLGIVLLVTGIVTSIVLYFQYVYWLHM 243
Query: 330 VYASLGALIFSIYLS 286
+YA+LGA+ F+++L+
Sbjct: 244 LYAALGAICFTLFLA 258
>AF193045-1|AAG22473.1| 311|Homo sapiens unknown protein.
Length = 311
Score = 64.5 bits (150), Expect = 4e-10
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Frame = -3
Query: 678 KNPFMFWVAFIVLIVCLIAMACCPDVRRKSSDELHIPGHLHGSAELPARH*RKRLRRDAV 499
+N +++V++ V +V + +ACC RR+ + + + + AV
Sbjct: 132 RNVAVYYVSYAVFVVTYLILACCQGPRRRFPWNIILLTLFTFAMGFMTGTISSMYQTKAV 191
Query: 498 LMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVA----IFVKGKVITL 331
++A+ ITA V + +T+F QTK DFT G+ IVLLV GIV F + +
Sbjct: 192 IIAMIITAVVSISVTIFCFQTKVDFTSCTGLFCVLGIVLLVTGIVTSIVLYFQYVYWLHM 251
Query: 330 VYASLGALIFSIYLS 286
+YA+LGA+ F+++L+
Sbjct: 252 LYAALGAICFTLFLA 266
>AB257295-1|BAE93467.1| 311|Homo sapiens responsive to centrifugal
force and shear stress gene 1 protein.
Length = 311
Score = 64.5 bits (150), Expect = 4e-10
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Frame = -3
Query: 678 KNPFMFWVAFIVLIVCLIAMACCPDVRRKSSDELHIPGHLHGSAELPARH*RKRLRRDAV 499
+N +++V++ V +V + +ACC RR+ + + + + AV
Sbjct: 132 RNVAVYYVSYAVFVVTYLILACCQGPRRRFPWNIILLTLFTFAMGFMTGTISSMYQTKAV 191
Query: 498 LMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVA----IFVKGKVITL 331
++A+ ITA V + +T+F QTK DFT G+ IVLLV GIV F + +
Sbjct: 192 IIAMIITAVVSISVTIFCFQTKVDFTSCTGLFCVLGIVLLVTGIVTSIVLYFQYVYWLHM 251
Query: 330 VYASLGALIFSIYLS 286
+YA+LGA+ F+++L+
Sbjct: 252 LYAALGAICFTLFLA 266
>AK075465-1|BAC11636.1| 137|Homo sapiens protein ( Homo sapiens
cDNA PSEC0158 fis, clone PLACE1008738, moderately
similar to PP1201 protein. ).
Length = 137
Score = 54.8 bits (126), Expect = 3e-07
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Frame = -3
Query: 504 AVLMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVA----IFVKGKVI 337
AV++A+ ITA V + +T+F QTK DFT G+ IVLLV GIV F +
Sbjct: 16 AVIIAMIITAVVSISVTIFCFQTKVDFTSCTGLFCVLGIVLLVTGIVTSIVLYFQYVYWL 75
Query: 336 TLVYASLGALIFSIYLS 286
++YA+LGA+ F+++L+
Sbjct: 76 HMLYAALGAICFTLFLA 92
>AK027755-1|BAB55346.1| 137|Homo sapiens protein ( Homo sapiens
cDNA FLJ14849 fis, clone PLACE1000611, weakly similar to
Rattus norvegicus neural membrane protein 35 mRNA. ).
Length = 137
Score = 54.8 bits (126), Expect = 3e-07
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Frame = -3
Query: 504 AVLMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVA----IFVKGKVI 337
AV++A+ ITA V + +T+F QTK DFT G+ IVLLV GIV F +
Sbjct: 16 AVIIAMIITAVVSISVTIFCFQTKVDFTSCTGLFCVLGIVLLVTGIVTSIVLYFQYVYWL 75
Query: 336 TLVYASLGALIFSIYLS 286
++YA+LGA+ F+++L+
Sbjct: 76 HMLYAALGAICFTLFLA 92
>AF182414-1|AAG14950.1| 284|Homo sapiens MDS013 protein.
Length = 284
Score = 51.6 bits (118), Expect = 3e-06
Identities = 25/67 (37%), Positives = 40/67 (59%)
Frame = -3
Query: 501 VLMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVAIFVKGKVITLVYA 322
+L A +T V GLT++ LQ+K DF+ G L +L + GI+ +F +++ LV A
Sbjct: 170 ILQAFILTTTVFFGLTVYTLQSKKDFSKFGAGLFALLWILCLSGILEVFFYSEIMELVLA 229
Query: 321 SLGALIF 301
+ GAL+F
Sbjct: 230 AAGALLF 236
>AK075069-1|BAC11384.1| 238|Homo sapiens protein ( Homo sapiens
cDNA FLJ90588 fis, clone PLACE1000927, moderately
similar to Z-protein. ).
Length = 238
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = -3
Query: 501 VLMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVAIFVKGKVITLVYA 322
+L A +T V GLT++ LQ+K DF+ G L +L + G + F +++ LV A
Sbjct: 124 ILQAFILTTTVFFGLTVYTLQSKKDFSKFGAGLFALLWILCLSGFLKFFFYSEIMELVLA 183
Query: 321 SLGALIF 301
+ GAL+F
Sbjct: 184 AAGALLF 190
>AF182041-1|AAG16898.1| 238|Homo sapiens z-protein protein.
Length = 238
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = -3
Query: 501 VLMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVAIFVKGKVITLVYA 322
+L A +T V GLT++ LQ+K DF+ G L +L + G + F +++ LV A
Sbjct: 124 ILQAFILTTTVFFGLTVYTLQSKKDFSKFGAGLFALLWILCLSGFLKFFFYSEIMELVLA 183
Query: 321 SLGALIF 301
+ GAL+F
Sbjct: 184 AAGALLF 190
>AF151877-1|AAD34114.1| 258|Homo sapiens CGI-119 protein protein.
Length = 258
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = -3
Query: 501 VLMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVAIFVKGKVITLVYA 322
+L A +T V GLT++ LQ+K DF+ G L +L + G + F +++ LV A
Sbjct: 144 ILQAFILTTTVFFGLTVYTLQSKKDFSKFGAGLFALLWILCLSGFLKFFFYSEIMELVLA 203
Query: 321 SLGALIF 301
+ GAL+F
Sbjct: 204 AAGALLF 210
>AF113127-1|AAF14868.1| 238|Homo sapiens S1R protein protein.
Length = 238
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = -3
Query: 501 VLMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVAIFVKGKVITLVYA 322
+L A +T V GLT++ LQ+K DF+ G L +L + G + F +++ LV A
Sbjct: 124 ILQAFILTTTVFFGLTVYTLQSKKDFSKFGAGLFALLWILCLSGFLKFFFYSEIMELVLA 183
Query: 321 SLGALIF 301
+ GAL+F
Sbjct: 184 AAGALLF 190
>BC064425-1|AAH64425.1| 343|Homo sapiens high mobility group
AT-hook 1-like 4 protein.
Length = 343
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 459 SPGTRPPLCQLPSAPHPFVDACANAEQG--ALRC 554
SP PP C +P PHP AC+ Q +L+C
Sbjct: 288 SPSGPPPRCSVPGCPHPRRYACSRTGQALCSLQC 321
>BC050666-1|AAH50666.1| 343|Homo sapiens ZNHIT4 protein protein.
Length = 343
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 459 SPGTRPPLCQLPSAPHPFVDACANAEQG--ALRC 554
SP PP C +P PHP AC+ Q +L+C
Sbjct: 288 SPSGPPPRCSVPGCPHPRRYACSRTGQALCSLQC 321
>AB054538-1|BAB21111.1| 343|Homo sapiens PAPA-1 protein.
Length = 343
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 459 SPGTRPPLCQLPSAPHPFVDACANAEQG--ALRC 554
SP PP C +P PHP AC+ Q +L+C
Sbjct: 288 SPSGPPPRCSVPGCPHPRRYACSRTGQALCSLQC 321
>AF490932-1|AAO11862.1| 111|Homo sapiens immunoglobulin kappa light
chain variable region protein.
Length = 111
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 613 LSRRETQKLRRTSYSWPSSRQRRAPCSALAQASTKGCGADGSWHNGG 473
LS R +Q ++ S +W R +AP + AST+ G G + G
Sbjct: 13 LSCRASQSVKTNSLAWFQQRPGQAPSLLIYDASTRATGFPGRFSGSG 59
>U58048-1|AAC50775.1| 318|Homo sapiens PRSM1 protein.
Length = 318
Score = 29.9 bits (64), Expect = 9.5
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 352 HEYGHDTEYKEDDGGAEQHAAHHGEVPLGLQSEQSQAQAHGR 477
HE GH ++ GG HA GE P G + +Q A GR
Sbjct: 204 HELGHHPDHAAGAGGQPHHADRRGEWPGG--AGPAQPAARGR 243
>M36067-1|AAA59518.1| 919|Homo sapiens LIG1 protein.
Length = 919
Score = 29.9 bits (64), Expect = 9.5
Identities = 26/96 (27%), Positives = 41/96 (42%)
Frame = +1
Query: 349 FHEYGHDTEYKEDDGGAEQHAAHHGEVPLGLQSEQSQAQAHGRRYANCHQHRIPS*TLAL 528
F E EYK D A+ HA GEV + ++++ + + + ++PS T +
Sbjct: 558 FEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFI 617
Query: 529 MPSRELCAAVKMARNMKFVGAFASHVGTARHRDETD 636
+ + AV R K + F V T R R E D
Sbjct: 618 LDTE----AVAWDREKKQIQPF--QVLTTRKRKEVD 647
>D38554-1|BAA07557.1| 268|Homo sapiens KIAA0047 protein.
Length = 268
Score = 29.9 bits (64), Expect = 9.5
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 352 HEYGHDTEYKEDDGGAEQHAAHHGEVPLGLQSEQSQAQAHGR 477
HE GH ++ GG HA GE P G + +Q A GR
Sbjct: 154 HELGHHPDHAAGAGGQPHHADRRGEWPGG--AGPAQPAARGR 193
>BC110622-1|AAI10623.1| 801|Homo sapiens LIG1 protein protein.
Length = 801
Score = 29.9 bits (64), Expect = 9.5
Identities = 26/96 (27%), Positives = 41/96 (42%)
Frame = +1
Query: 349 FHEYGHDTEYKEDDGGAEQHAAHHGEVPLGLQSEQSQAQAHGRRYANCHQHRIPS*TLAL 528
F E EYK D A+ HA GEV + ++++ + + + ++PS T +
Sbjct: 558 FEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFI 617
Query: 529 MPSRELCAAVKMARNMKFVGAFASHVGTARHRDETD 636
+ + AV R K + F V T R R E D
Sbjct: 618 LDTE----AVAWDREKKQIQPF--QVLTTRKRKEVD 647
>BC108318-1|AAI08319.1| 919|Homo sapiens ligase I, DNA,
ATP-dependent protein.
Length = 919
Score = 29.9 bits (64), Expect = 9.5
Identities = 26/96 (27%), Positives = 41/96 (42%)
Frame = +1
Query: 349 FHEYGHDTEYKEDDGGAEQHAAHHGEVPLGLQSEQSQAQAHGRRYANCHQHRIPS*TLAL 528
F E EYK D A+ HA GEV + ++++ + + + ++PS T +
Sbjct: 558 FEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFI 617
Query: 529 MPSRELCAAVKMARNMKFVGAFASHVGTARHRDETD 636
+ + AV R K + F V T R R E D
Sbjct: 618 LDTE----AVAWDREKKQIQPF--QVLTTRKRKEVD 647
>AF527418-1|AAM77697.1| 919|Homo sapiens ligase I, DNA,
ATP-dependent protein.
Length = 919
Score = 29.9 bits (64), Expect = 9.5
Identities = 26/96 (27%), Positives = 41/96 (42%)
Frame = +1
Query: 349 FHEYGHDTEYKEDDGGAEQHAAHHGEVPLGLQSEQSQAQAHGRRYANCHQHRIPS*TLAL 528
F E EYK D A+ HA GEV + ++++ + + + ++PS T +
Sbjct: 558 FEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFI 617
Query: 529 MPSRELCAAVKMARNMKFVGAFASHVGTARHRDETD 636
+ + AV R K + F V T R R E D
Sbjct: 618 LDTE----AVAWDREKKQIQPF--QVLTTRKRKEVD 647
>AB208791-1|BAD92028.1| 832|Homo sapiens DNA ligase I variant
protein.
Length = 832
Score = 29.9 bits (64), Expect = 9.5
Identities = 26/96 (27%), Positives = 41/96 (42%)
Frame = +1
Query: 349 FHEYGHDTEYKEDDGGAEQHAAHHGEVPLGLQSEQSQAQAHGRRYANCHQHRIPS*TLAL 528
F E EYK D A+ HA GEV + ++++ + + + ++PS T +
Sbjct: 589 FEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFI 648
Query: 529 MPSRELCAAVKMARNMKFVGAFASHVGTARHRDETD 636
+ + AV R K + F V T R R E D
Sbjct: 649 LDTE----AVAWDREKKQIQPF--QVLTTRKRKEVD 678
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,000,124
Number of Sequences: 237096
Number of extensions: 2134253
Number of successful extensions: 10252
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 9686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10211
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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