Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0272
(716 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical p... 62 4e-10
Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical pr... 62 4e-10
AC024777-1|AAF60563.1| 133|Caenorhabditis elegans Hypothetical ... 52 5e-07
U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily ass... 33 0.15
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 29 0.22
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 29 2.5
U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical pr... 29 2.5
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr... 29 2.5
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr... 29 2.5
U58760-9|AAK31465.1| 654|Caenorhabditis elegans Dishevelled rel... 29 4.4
Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical p... 28 5.8
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 28 5.8
Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical pr... 28 7.7
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 28 7.7
>Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1a protein.
Length = 296
Score = 62.1 bits (144), Expect = 4e-10
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Frame = -3
Query: 678 KNPFMFWVAFIVLIVCLIAMACCPDVRRKSSDELHIPGHLHGSAELPARH*RKRLRRDAV 499
+N ++ ++++ V +++ CC VRRK L + G + + + V
Sbjct: 117 RNSALYLGSYVIFFVTYLSLVCCEGVRRKFPVNLIVTGIFTLATSVMTMVISAHHDANVV 176
Query: 498 LMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVAI----FVKGKVITL 331
L+A+ I + + A QTK+D T G +L ++ + FG+V + F K K + +
Sbjct: 177 LLALAICIGCTFSIVIVASQTKFDLTAHMGYILIISMCFMFFGLVVVICSMFFKIKFLMM 236
Query: 330 VYASLGALIFSIYL 289
VYA GALI +YL
Sbjct: 237 VYALGGALIMMLYL 250
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1
Query: 263 GQAKYSISPEEYIFAA 216
G KY ISPEEYIFA+
Sbjct: 259 GGKKYEISPEEYIFAS 274
>Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1b protein.
Length = 296
Score = 62.1 bits (144), Expect = 4e-10
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Frame = -3
Query: 678 KNPFMFWVAFIVLIVCLIAMACCPDVRRKSSDELHIPGHLHGSAELPARH*RKRLRRDAV 499
+N ++ ++++ V +++ CC VRRK L + G + + + V
Sbjct: 117 RNSALYLGSYVIFFVTYLSLVCCEGVRRKFPVNLIVTGIFTLATSVMTMVISAHHDANVV 176
Query: 498 LMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVAI----FVKGKVITL 331
L+A+ I + + A QTK+D T G +L ++ + FG+V + F K K + +
Sbjct: 177 LLALAICIGCTFSIVIVASQTKFDLTAHMGYILIISMCFMFFGLVVVICSMFFKIKFLMM 236
Query: 330 VYASLGALIFSIYL 289
VYA GALI +YL
Sbjct: 237 VYALGGALIMMLYL 250
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1
Query: 263 GQAKYSISPEEYIFAA 216
G KY ISPEEYIFA+
Sbjct: 259 GGKKYEISPEEYIFAS 274
>AC024777-1|AAF60563.1| 133|Caenorhabditis elegans Hypothetical
protein Y42H9AR.2 protein.
Length = 133
Score = 51.6 bits (118), Expect = 5e-07
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Frame = -3
Query: 507 DAVLMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVA----IFVKGKV 340
DAVL+++ IT + LFA TK D T GV I L++FG++A IF+ +
Sbjct: 12 DAVLISLLITTGCSASIILFAATTKKDLTSCLGVAFILGICLMLFGLMACIFCIFLNWQF 71
Query: 339 ITLVYASLGALIFSIYLS 286
+ +VYA LGAL+ YL+
Sbjct: 72 LYIVYAVLGALLCMFYLA 89
>U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily
assigned gene nameprotein 132 protein.
Length = 276
Score = 33.5 bits (73), Expect = 0.15
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = -3
Query: 501 VLMAVGITAAVCLGLTLFALQTKWDFTM---MGGVLLCATIVLLVFGIVAIFVKGKVITL 331
VL A IT V L + LQ K DF++ G LLC VLL GI +F +
Sbjct: 163 VLEAAVITGLVVASLFAYTLQNKRDFSVGYASMGSLLC---VLLWAGIFQMFFMSPAVNF 219
Query: 330 VYASLGALIFSIYL 289
V GA +F + L
Sbjct: 220 VINVFGAGLFCVLL 233
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 593 KAPTNFIFLAIFTAAQSSLLGISASVYE 510
+ P N++ LA FTA Q+ +G +++E
Sbjct: 132 EVPLNYVLLAAFTAVQAVTMGCVVTLFE 159
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/76 (22%), Positives = 30/76 (39%)
Frame = +1
Query: 268 SSAGCRREVNGEYESAQGRVHERYDLTFHEYGHDTEYKEDDGGAEQHAAHHGEVPLGLQS 447
SS+ + ES + H HE+ ++ +G +HAAHH E +
Sbjct: 346 SSSSSSSSSSSSSESEDEKKHAPAHHEHHEHKDGAHHEHKEGEHHEHAAHHDEHGV---H 402
Query: 448 EQSQAQAHGRRYANCH 495
+ + HG ++ H
Sbjct: 403 HRHHGEHHGTHHSPAH 418
Score = 29.5 bits (63), Expect(2) = 0.22
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = +1
Query: 304 YESAQGRVHERYDLTFHEYGHDTEYKEDDGGAEQHAAHHGE--VPLGLQSEQSQAQA-HG 474
+E +G HE + E+G + + G AHHGE G E A A HG
Sbjct: 382 HEHKEGEHHE-HAAHHDEHGVHHRHHGEHHGTHHSPAHHGEHGTHHGHHGEHHHAPAHHG 440
Query: 475 RRYANCHQHRIPS 513
++ H H P+
Sbjct: 441 HHESHGHGHHSPA 453
Score = 22.2 bits (45), Expect(2) = 0.22
Identities = 9/29 (31%), Positives = 11/29 (37%)
Frame = +1
Query: 586 GAFASHVGTARHRDETDYQHYEGHPEHEG 672
G SH A H ++ H H H G
Sbjct: 492 GHHGSHHSPAHHGHHGEHHHAPAHHGHHG 520
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 302 NMRAPRDAYTSVMTLPFTNMATIPN-TRRTMVAQSSTPPI-MVKSHLVCRANRVKPRHTA 475
N + R TS T P T + IP+ T T S+TPP+ + V +++ P +
Sbjct: 400 NASSARPNVTSTTTAPTTESSAIPDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVKST 459
Query: 476 AVMPTAI 496
+ P +
Sbjct: 460 TIAPVTM 466
>U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical
protein D1044.2b protein.
Length = 501
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 672 PFMFWVAFIVLIVCLIAMACCPDVRRKSSDEL 577
P M +A++V++VC+ A+ CC + S +L
Sbjct: 412 PVMIILAWLVILVCIGAVVCCKRRNSRESSQL 443
>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical protein
D1044.2c protein.
Length = 1090
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 672 PFMFWVAFIVLIVCLIAMACCPDVRRKSSDEL 577
P M +A++V++VC+ A+ CC + S +L
Sbjct: 962 PVMIILAWLVILVCIGAVVCCKRRNSRESSQL 993
>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical protein
D1044.2a protein.
Length = 1051
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 672 PFMFWVAFIVLIVCLIAMACCPDVRRKSSDEL 577
P M +A++V++VC+ A+ CC + S +L
Sbjct: 962 PVMIILAWLVILVCIGAVVCCKRRNSRESSQL 993
>U58760-9|AAK31465.1| 654|Caenorhabditis elegans Dishevelled
related protein 2 protein.
Length = 654
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Frame = +1
Query: 295 NGEYE----SAQGRVHERYDLTFHEYGHDTEYKEDDGGAEQ-HAAHHGEVPLGLQSEQSQ 459
NG +E + +G VH H D K G E AAHH + P ++SQ
Sbjct: 173 NGRFELYLLTVEGSVHSDTSSGRHRRKQDGSSKGSSGSREYLRAAHHYDNPTPFSDDESQ 232
Query: 460 AQA 468
A +
Sbjct: 233 ASS 235
>Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical
protein F40F9.2 protein.
Length = 244
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1
Query: 263 GQAKYSISPEEYIFAA 216
G KY +SPE+YIFAA
Sbjct: 207 GGRKYELSPEDYIFAA 222
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 332 SVMTLPFTNMATIPNTRRTMVAQSSTPPIMVKSHLVCRANRVKPRHTAAVMPTAIST 502
S + P N+A+IP+ + V +S I++ S + R K R T + + A +T
Sbjct: 711 SSYSTPLQNLASIPDVKIDAVKKSKALEILISSLVASSVKRRKKRDTKSDLLAAKAT 767
>Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical
protein ZK858.5 protein.
Length = 409
Score = 27.9 bits (59), Expect = 7.7
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3
Query: 669 FMFWVAFIVLIVCLIAMACCPDVRRK 592
F+FW + +++VC+I + C V K
Sbjct: 210 FLFWSSLFLMLVCVILLGCSRKVADK 235
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 27.9 bits (59), Expect = 7.7
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Frame = -2
Query: 625 RDGVLSRRETQKLRRTSYSWPSSRQR--RAPCSALAQASTKGCGADGSWHNGGRVPGLDS 452
R L E + + TS+S S++R R+ +L+++ + S +G R P
Sbjct: 273 RSSPLRAAEISRRKSTSHSTSLSKRRYLRSRSRSLSKSPARRRSRHLS-RSGSRTPAQRH 331
Query: 451 VRSADQVGLHHDGRRAALRHHRPPCIRYRGHIRER*GHNARVRVPGRS 308
R ++ GR + R PP R R R R +R R P R+
Sbjct: 332 SRRSESTSRRRSGRHSRSRSRSPP--RKRPVRRSR--SRSRSRTPNRN 375
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,632,500
Number of Sequences: 27780
Number of extensions: 318629
Number of successful extensions: 1204
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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