Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0272
         (716 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   1.2  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    24   1.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   5.0  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   6.7  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   8.8  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   8.8  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   8.8  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   8.8  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   8.8  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   8.8  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   8.8  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 7/24 (29%), Positives = 17/24 (70%)
 Frame = -3

Query: 651 FIVLIVCLIAMACCPDVRRKSSDE 580
           FI+L+  +    C P+V+++++D+
Sbjct: 4   FIILLALVALGVCAPNVKQRAADQ 27


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 400 EQHAAHHGEVPLGLQSEQSQAQAHGRRYANCHQHR 504
           EQH  +  +      S+QSQ   H R+     QH+
Sbjct: 199 EQHMMYQQQQQSQAASQQSQPGMHPRQQQQAQQHQ 233



 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = -3

Query: 234 GVHLRGPQPLLGHHQHIPVHSDH 166
           G     P P +GH  H P  + H
Sbjct: 109 GYRSASPSPGMGHMGHTPTPNGH 131


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +3

Query: 249 VLCLPPIISW 278
           V+C PP++ W
Sbjct: 195 VICFPPLVGW 204


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 630 LIAMACCPDVRRKSSDELHIPGHLHGSAELPA 535
           L  M C PD++ K   EL     + G ++ PA
Sbjct: 361 LAVMGCHPDIQEKVIQEL---DEIFGDSDRPA 389


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 30  YRISLINTFNNGKSKRKKKLF*YIILS 110
           Y+ S  N +NN  +   KKL  Y I++
Sbjct: 89  YKYSNYNNYNNNYNTNYKKLQYYNIIN 115


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 30  YRISLINTFNNGKSKRKKKLF*YIILS 110
           Y+ S  N +NN  +   KKL  Y I++
Sbjct: 89  YKYSNYNNYNNNYNTNYKKLQYYNIIN 115


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 30  YRISLINTFNNGKSKRKKKLF*YIILS 110
           Y+ S  N +NN  +   KKL  Y I++
Sbjct: 89  YKYSNYNNYNNNYNTNYKKLQYYNIIN 115


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 30  YRISLINTFNNGKSKRKKKLF*YIILS 110
           Y+ S  N +NN  +   KKL  Y I++
Sbjct: 89  YKYSNYNNYNNNYNTNYKKLQYYNIIN 115


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 30  YRISLINTFNNGKSKRKKKLF*YIILS 110
           Y+ S  N +NN  +   KKL  Y I++
Sbjct: 89  YKYSNYNNYNNNYNTNYKKLQYYNIIN 115


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 30  YRISLINTFNNGKSKRKKKLF*YIILS 110
           Y+ S  N +NN  +   KKL  Y I++
Sbjct: 89  YKYSNYNNYNNNYNTNYKKLQYYNIIN 115


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 30  YRISLINTFNNGKSKRKKKLF*YIILS 110
           Y+ S  N +NN  +   KKL  Y I++
Sbjct: 89  YKYSNYNNYNNNYNTNYKKLQYYNIIN 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,758
Number of Sequences: 438
Number of extensions: 4078
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)