Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0270
(702 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0945 - 22791754-22791863,22792295-22792367,22792457-227925... 54 8e-08
11_06_0315 + 22318155-22318210,22319743-22319769,22319868-223199... 49 4e-06
11_04_0392 + 17131839-17131943,17134182-17134258,17134385-171344... 48 5e-06
01_06_0575 - 30357556-30357582,30357698-30357944,30358039-303581... 47 2e-05
08_02_0954 + 22989780-22989883,22989980-22990160,22990218-22990316 42 6e-04
06_01_0865 - 6571056-6571190,6571737-6571977,6572279-6572401,657... 41 8e-04
02_05_0743 + 31425827-31425888,31426733-31426759,31426840-314269... 41 8e-04
09_04_0341 + 16820890-16820993,16821082-16821269,16821412-16821416 35 0.054
03_02_0377 - 7898075-7898605,7900782-7901000,7901079-7901142,790... 35 0.072
10_02_0078 - 4992019-4992594,4993156-4993248,4995984-4996202,499... 32 0.38
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 30 2.0
08_02_0919 - 22627147-22627326,22627646-22627726,22627827-226281... 28 8.3
05_05_0092 - 22323049-22323224,22323840-22323887,22323962-223240... 28 8.3
05_04_0376 - 20754386-20755392,20755683-20756320,20756433-207566... 28 8.3
01_06_1550 + 38191957-38192054,38193084-38193284,38193456-381940... 28 8.3
>07_03_0945 -
22791754-22791863,22792295-22792367,22792457-22792552,
22793268-22793331,22793957-22794008,22794525-22794622,
22795108-22795166,22795981-22796013
Length = 194
Score = 54.4 bits (125), Expect = 8e-08
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = +1
Query: 247 VPRYMAMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDS--SSAGFHVLAVKVHLRDLV 420
+P Y +A+E + + +WL YW Y FSI E F+D SS F+ L L
Sbjct: 38 LPVYSTFRAIEKKDQKEKERWLLYWAAYGSFSIAEIFADQILSSVPFYYHVKFAILVWLQ 97
Query: 421 LPAD*IQRVLVIYYRIIRPYYQKHHGRID 507
P++ +Y R +RP++ KH +ID
Sbjct: 98 FPSN--SGAKHVYRRYMRPFFLKHQAKID 124
>11_06_0315 +
22318155-22318210,22319743-22319769,22319868-22319990,
22320867-22321110,22321487-22321981
Length = 314
Score = 48.8 bits (111), Expect = 4e-06
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +1
Query: 241 LRVPRYMAMKALESPQKDDDTKWLTYWVVYACFSIVE--YFSDSSSAGFHVLAVKVHLRD 414
L P Y ++KA+E+ DD +WLTYWV+Y+ ++ E + S F + +
Sbjct: 24 LAYPLYASVKAIETKSPVDDQQWLTYWVMYSLITLFELTFASIIQWLPFWPSMKLIFICW 83
Query: 415 LVLPAD*IQRVLVIYYRIIRPYYQKHHGRIDVW 513
LVLP +Y +RP + KH +++W
Sbjct: 84 LVLPY--FNGAAFVYQNYVRPMFVKHQ-MVNIW 113
>11_04_0392 +
17131839-17131943,17134182-17134258,17134385-17134411,
17134512-17134634,17134738-17134981,17135081-17135098
Length = 197
Score = 48.4 bits (110), Expect = 5e-06
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +1
Query: 241 LRVPRYMAMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDSSSAGFHV-LAVK-VHLRD 414
L P Y +++A+ESP K DD +WL YW++Y+ ++VE +S + +K + +
Sbjct: 66 LLYPLYASVQAMESPSKLDDEQWLAYWILYSFITLVEMLLESLIYWIPIWYELKLLFIAW 125
Query: 415 LVLPAD*IQRVLVIYYRIIRPYYQKH 492
L LP + IY R +R +KH
Sbjct: 126 LALPN--FRGAAFIYNRFVREQLRKH 149
>01_06_0575 - 30357556-30357582,30357698-30357944,30358039-30358161,
30358275-30358301,30358475-30358633,30359764-30359948,
30360225-30360293,30360432-30362354,30363018-30363339,
30363506-30363543
Length = 1039
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +1
Query: 241 LRVPRYMAMKALESPQKDDDTKWLTYWVVYACFSIVE 351
L P Y +M+A+ESP DD +WLTYWV+Y+ ++ E
Sbjct: 904 LLYPLYASMRAIESPSTLDDQQWLTYWVLYSLITLFE 940
>08_02_0954 + 22989780-22989883,22989980-22990160,22990218-22990316
Length = 127
Score = 41.5 bits (93), Expect = 6e-04
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +1
Query: 274 LESPQKDDDTKWLTYWVVYACFSIVEYFSDSSSAGFHV-LAVKV-HLRDLVLPAD*IQRV 447
+ESP K DD +WL YW++Y+ +++E ++ V VKV + LVLP +
Sbjct: 1 MESPTKVDDEQWLAYWILYSFITLLEMVAEPVLYWIPVWYPVKVLFVAWLVLPQ--FKGA 58
Query: 448 LVIYYRIIRPYYQKHHGR 501
IY +++R +K+ R
Sbjct: 59 SFIYKKLVREQLRKYRAR 76
>06_01_0865 -
6571056-6571190,6571737-6571977,6572279-6572401,
6572501-6572527,6573954-6574009
Length = 193
Score = 41.1 bits (92), Expect = 8e-04
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +1
Query: 241 LRVPRYMAMKALESPQKDDDTKWLTYWVVYACFSIVE 351
L P Y +++A+E+ DD +WLTYWV+Y+ ++ E
Sbjct: 24 LAYPLYASVRAIETKSPVDDQQWLTYWVLYSFITLFE 60
>02_05_0743 +
31425827-31425888,31426733-31426759,31426840-31426962,
31427252-31427492,31427655-31427780
Length = 192
Score = 41.1 bits (92), Expect = 8e-04
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +1
Query: 241 LRVPRYMAMKALESPQKDDDTKWLTYWVVYACFSIVE 351
L P Y +++A+E+ DD +WLTYWV+Y+ ++ E
Sbjct: 26 LAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFE 62
>09_04_0341 + 16820890-16820993,16821082-16821269,16821412-16821416
Length = 98
Score = 35.1 bits (77), Expect = 0.054
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 274 LESPQKDDDTKWLTYWVVYACFSIVE 351
+ES K DD +WL YW++Y+ +++E
Sbjct: 1 MESTSKVDDEQWLVYWILYSLITLME 26
>03_02_0377 -
7898075-7898605,7900782-7901000,7901079-7901142,
7901226-7901282,7901373-7901471,7901744-7901793,
7902378-7902422,7902967-7903062
Length = 386
Score = 34.7 bits (76), Expect = 0.072
Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = +1
Query: 250 PRYMAMKALE--SPQKDDDTKWLTYWVVYACFSIVEYFSDSSSAGFHVLAVKVHLRDLVL 423
P Y K +E P+ + W YW++ A +++E F D + + + + + L
Sbjct: 72 PAYECYKTVELNKPEIEQLIFWCQYWILVALMTVMERFGDFTISWLPFYSEAKLMFFIYL 131
Query: 424 PAD*IQRVLVIYYRIIRPYYQKHHGRID 507
+ IY RPY +H ID
Sbjct: 132 WYPKTKGTTYIYGTFFRPYISQHENEID 159
>10_02_0078 -
4992019-4992594,4993156-4993248,4995984-4996202,
4996282-4996345,4996429-4996485,4996573-4996671,
4997296-4997327
Length = 379
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = +1
Query: 250 PRYMAMKALE--SPQKDDDTKWLTYWVVYACFSIVEYFSDSSSAGFHVLAVKVHLRDLVL 423
P Y K +E P+ + W YW++ A +++E F D + + + + + + L
Sbjct: 19 PAYECYKTVELNKPEIEKLIFWCQYWILVALLTVLERFGDFAISWLPLYSEAKLMFFIYL 78
Query: 424 PAD*IQRVLVIYYRIIRPYYQKHHGRID 507
+ +Y RPY ++ ID
Sbjct: 79 WCPRTKGTSYVYETFFRPYISQYENDID 106
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 5/91 (5%)
Frame = +1
Query: 250 PRYMAMKALE--SPQKDDDTKWLTYWVVYACFSIVEYFSDS--SSAGFHVLAVKVHLRDL 417
P Y K +E P+ + W YW++ A ++ E D+ S + A + L
Sbjct: 19 PAYDCYKTVELNRPEVEQLRFWCQYWILLAVLTVFERVGDNFVSWLPMYSEAKLAFIVYL 78
Query: 418 VLP-AD*IQRVLVIYYRIIRPYYQKHHGRID 507
P Q +Y +PY KH ID
Sbjct: 79 WYPKTQHFQGTSYVYESFFKPYIGKHEAEID 109
>08_02_0919 -
22627147-22627326,22627646-22627726,22627827-22628103,
22629451-22629755,22629835-22629987,22630318-22631076
Length = 584
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 111 VHGLLLSFRLGSMLSLYSCNLDAIVRSFSG*PNV 10
++ L SFR + L LY C L + F+G PN+
Sbjct: 114 LNSCLFSFRELTSLKLYCCGLPNLPAEFAGFPNL 147
>05_05_0092 -
22323049-22323224,22323840-22323887,22323962-22324016,
22324260-22324360,22324457-22324518,22324683-22324881,
22325107-22325254,22325331-22325377,22325928-22325995,
22326428-22326542,22326657-22326816
Length = 392
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 511 WPTQGNKIKCRFNAIKKL*CFPSGGRYHQKDQLNLLVFLH 630
W QG+ +KCR NAIK L +G + L+ +LH
Sbjct: 153 WSDQGH-LKCRVNAIKGLIALLNGETESENAVLSYCEYLH 191
>05_04_0376 -
20754386-20755392,20755683-20756320,20756433-20756627,
20757730-20757795,20757942-20758007,20758402-20758445
Length = 671
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = +2
Query: 272 LWSHRRRMTIQNGLHIGWCTPVFLSWSTFPIHRRLVSMYW 391
L H +T NG G+ +F W P H + +W
Sbjct: 486 LMDHINEITSYNGGDQGYLNEIFTWWHRIPKHMNFLKHFW 525
>01_06_1550 +
38191957-38192054,38193084-38193284,38193456-38194090,
38194398-38195419
Length = 651
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = +2
Query: 272 LWSHRRRMTIQNGLHIGWCTPVFLSWSTFPIHRRLVSMYW 391
L H +T NG G+ +F W P H + +W
Sbjct: 461 LMDHINEITSYNGGDQGYLNEIFTWWHRIPKHMNFLKHFW 500
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,684,031
Number of Sequences: 37544
Number of extensions: 441958
Number of successful extensions: 1029
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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