Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0269
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   1.0  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   2.3  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   2.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.1  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   5.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   5.4  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   7.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.1  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   7.1  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   7.1  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   7.1  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 53  YPIQDCFHNDCHTGGG 100
           Y  QDC+  DC  G G
Sbjct: 78  YNTQDCYREDCIPGDG 93


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 234 SRSHHKASQNSPMKIPAS 181
           SRSH  A+++ P   PAS
Sbjct: 247 SRSHQPATKSKPRPAPAS 264


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 311 HYMNEQHPENKHQEP 267
           H+M EQHP+  H +P
Sbjct: 169 HHMQEQHPQ--HHQP 181


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 311 HYMNEQHPENKHQEP 267
           H+M EQHP+  H +P
Sbjct: 171 HHMQEQHPQ--HHQP 183


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 466 IPHFDCSIPASCEYCIKFRC 407
           I  FDC I +   +C+  RC
Sbjct: 372 ISDFDCDINSIQYFCLMARC 391


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +2

Query: 428 LTGSWDGTVKMWDSRVPNCVGT 493
           L GSWDG         P+ V T
Sbjct: 209 LRGSWDGVTGHHSGLYPSAVDT 230



 Score = 21.0 bits (42), Expect = 7.1
 Identities = 12/45 (26%), Positives = 18/45 (40%)
 Frame = +2

Query: 338 YDLNASTETILGEHKGAIRCVEFASELNAVLTGSWDGTVKMWDSR 472
           YDL  S + + G H G        +    +LT   D  ++ W  R
Sbjct: 207 YDLRGSWDGVTGHHSGLYPSAVDTTTNQKLLT--VDAAIRGWIQR 249


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 541 FRQLCSLCIPVIS 503
           F Q C++C+P I+
Sbjct: 19  FGQFCAICVPKIT 31


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/35 (25%), Positives = 15/35 (42%)
 Frame = +2

Query: 59  IQDCFHNDCHTGGGVAHRVQIKKLTRRRYFER*IC 163
           I DC  N C  GG    ++   +   +  +E  +C
Sbjct: 69  INDCKVNPCENGGTCVDKINAFQCICKEGWEGALC 103


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 184 KYWLDFGANLTL 149
           KYW +F ANL L
Sbjct: 78  KYWSEFLANLKL 89


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -2

Query: 474 TLLSHILTVPSQLPVSTALSSDANSTQRIAP 382
           T+L+ ILT P +LP    + +     +++ P
Sbjct: 96  TVLAGILTTPFKLPYFWKMLTGFGKIEQVLP 126


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory
          receptor candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 60 MGYKNTN*NYNRI 22
          + YKN+N NY++I
Sbjct: 25 ISYKNSNVNYSKI 37


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 429 STALSSDANSTQRIAPLCSPRIVSVLAFKSYI 334
           S   +SD+ +++  +   +P+I S   FK+YI
Sbjct: 44  SPVSNSDSENSEVSSNSYTPKIKSCRPFKAYI 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,923
Number of Sequences: 336
Number of extensions: 2832
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)