Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0266
         (545 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_47364| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.3  
SB_8051| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   7.6  

>SB_47364| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 333

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -1

Query: 335 KLVAAVIN-FLLQQS*HIIANIVLTKTDRSHFVYPIHSIVLQNLFRYPINSCLN 177
           K++A VI  FLL     ++ N+VL         +P+    +  L +Y  +SC N
Sbjct: 224 KIIAVVIGEFLLCWGPFLVTNVVLNYCISCRMAFPVQGAYILKLLQYS-SSCFN 276


>SB_8051| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 840

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = -1

Query: 245 FVYPIHSIVLQNLFR--YPINSCLNKC 171
           +VYP+ S+ L  +FR  YP+ S   +C
Sbjct: 47  YVYPVFSLCLPGVFRYVYPVFSLFTRC 73


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,973,301
Number of Sequences: 59808
Number of extensions: 243333
Number of successful extensions: 449
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 449
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1252112599
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)