Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0265
(727 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40800-9|AAA81494.1| 316|Caenorhabditis elegans Hypothetical pr... 72 4e-13
Z54236-2|CAE46661.1| 313|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z54236-1|CAA90979.2| 312|Caenorhabditis elegans Hypothetical pr... 59 3e-09
AF321546-1|AAG42102.1| 312|Caenorhabditis elegans suppressor of... 59 3e-09
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ... 31 0.63
Z49887-3|CAC70079.1| 639|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z49887-2|CAA90057.1| 625|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z46829-1|CAA86862.1| 375|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF068867-1|AAC35506.1| 639|Caenorhabditis elegans putative acti... 29 4.5
AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein. 28 5.9
>U40800-9|AAA81494.1| 316|Caenorhabditis elegans Hypothetical
protein D2096.8 protein.
Length = 316
Score = 72.1 bits (169), Expect = 4e-13
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 481 YRASNGS-QCKGIPDFWYNIFRNVSMLSEMMPEHDEPILKCLQDIKVPMHEDPISFTLGI 657
Y+A+ KGI DFW R +++E + EHD PIL L D+ +DP F +
Sbjct: 101 YKAAEADPSAKGIKDFWLTALRTHDLVAEAIEEHDVPILSYLTDVTTAASKDPAGFKIEF 160
Query: 658 YFAPNEYFTNTVLTKEYLMKCKP 726
+FA N YF N VLTK YL+ P
Sbjct: 161 HFATNPYFKNQVLTKTYLLGFDP 183
>Z54236-2|CAE46661.1| 313|Caenorhabditis elegans Hypothetical
protein C27B7.1b protein.
Length = 313
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +1
Query: 514 IPDFWYNIFRNVSMLSEMMPEHDEPILKCLQDIKVPMHEDPIS-FTLGIYFAPNEYFTNT 690
I +FW F N +LS +PE E +L L+D++V ED S F + + F PNEYFTN
Sbjct: 77 IDNFWQTAFLNHHLLSTAIPEEQEDLLAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNE 136
Query: 691 VLTKEY 708
V+TK Y
Sbjct: 137 VITKSY 142
>Z54236-1|CAA90979.2| 312|Caenorhabditis elegans Hypothetical
protein C27B7.1a protein.
Length = 312
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +1
Query: 514 IPDFWYNIFRNVSMLSEMMPEHDEPILKCLQDIKVPMHEDPIS-FTLGIYFAPNEYFTNT 690
I +FW F N +LS +PE E +L L+D++V ED S F + + F PNEYFTN
Sbjct: 77 IDNFWQTAFLNHHLLSTAIPEEQEDLLAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNE 136
Query: 691 VLTKEY 708
V+TK Y
Sbjct: 137 VITKSY 142
>AF321546-1|AAG42102.1| 312|Caenorhabditis elegans suppressor of
presenilin 2 protein.
Length = 312
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +1
Query: 514 IPDFWYNIFRNVSMLSEMMPEHDEPILKCLQDIKVPMHEDPIS-FTLGIYFAPNEYFTNT 690
I +FW F N +LS +PE E +L L+D++V ED S F + + F PNEYFTN
Sbjct: 77 IDNFWQTAFLNHHLLSTAIPEEQEDLLAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNE 136
Query: 691 VLTKEY 708
V+TK Y
Sbjct: 137 VITKSY 142
>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
protein W09B6.1a protein.
Length = 2054
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 535 IFRNVSMLSEMMPEHDEPILKCLQDIKVPMHEDPIS 642
IF V + + +P + P+L L ++V H+DP S
Sbjct: 1145 IFEQVRLEKDRLPANSYPVLSKLSTVRVSQHDDPTS 1180
>Z49887-3|CAC70079.1| 639|Caenorhabditis elegans Hypothetical
protein F09B9.2b protein.
Length = 639
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 530 YQKSGIPLHWDPLEA-R*PCHPSFPH 456
++K +PLHWDP A R P PH
Sbjct: 441 HKKQRLPLHWDPRNASRTPSGKKMPH 466
>Z49887-2|CAA90057.1| 625|Caenorhabditis elegans Hypothetical
protein F09B9.2a protein.
Length = 625
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 530 YQKSGIPLHWDPLEA-R*PCHPSFPH 456
++K +PLHWDP A R P PH
Sbjct: 427 HKKQRLPLHWDPRNASRTPSGKKMPH 452
>Z46829-1|CAA86862.1| 375|Caenorhabditis elegans Hypothetical
protein T14B1.1 protein.
Length = 375
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 386 NPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPMD 499
+P RD+ EE LA+ ++ A GE+++ + EP D
Sbjct: 6 DPGRDEEVEEPLAKKIRVVAQEAGEDEESEMEKEPNAD 43
>AF068867-1|AAC35506.1| 639|Caenorhabditis elegans putative
actin-binding proteinUNC-115 protein.
Length = 639
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 530 YQKSGIPLHWDPLEA-R*PCHPSFPH 456
++K +PLHWDP A R P PH
Sbjct: 441 HKKQRLPLHWDPRNASRTPSGKKMPH 466
>AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.
Length = 1766
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = +1
Query: 523 FWYNIFRNVSMLSEMMPEHDEPILKCLQDIKVPMHEDPISFTLGIYFAPNEYFTNTVLTK 702
FWYN+ R S + H KC+ +P+ ED +G E T ++ K
Sbjct: 311 FWYNVDRCRSGTDSIRLPHIGRDTKCVNKAHIPLDEDSCELGVGGSIELVEMSTKDIMGK 370
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,178,417
Number of Sequences: 27780
Number of extensions: 331162
Number of successful extensions: 1023
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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