Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0263
         (726 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0919 - 29422003-29422267,29422411-29422660,29423163-294234...    30   2.2  
02_05_0419 - 28814754-28816114,28816749-28817435,28817554-288177...    29   2.8  
05_07_0247 + 28643862-28644310,28645151-28645207,28645644-286489...    29   3.8  
11_01_0682 - 5575297-5575308,5575391-5575516,5575779-5575885,557...    28   6.6  
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287...    28   6.6  
01_03_0208 + 13797780-13797931,13798234-13798288,13798807-13799943     28   8.7  

>04_04_0919 -
           29422003-29422267,29422411-29422660,29423163-29423481,
           29423625-29424794,29424879-29425388,29425449-29425607
          Length = 890

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -3

Query: 385 LPFFTSVFSSKGFCFLALCIIFSTILGSA 299
           LP  TS F  K FC  +  +IF T+ GSA
Sbjct: 534 LPATTSPFKIKKFCLRSASLIFCTVSGSA 562


>02_05_0419 -
           28814754-28816114,28816749-28817435,28817554-28817774,
           28818536-28818750
          Length = 827

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/34 (32%), Positives = 24/34 (70%)
 Frame = +3

Query: 330 QRAKKQKPLLENTEVKKGKEKSILFPEEKQSFQD 431
           +++KK+K +  ++++KK  E+ +L    K++FQD
Sbjct: 162 KKSKKRKGITASSDIKKEAEQYVLHAGSKRNFQD 195


>05_07_0247 + 28643862-28644310,28645151-28645207,28645644-28648950,
            28649069-28649144,28649356-28649426,28649524-28649589,
            28649677-28649766,28649874-28650050,28650513-28650548
          Length = 1442

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +3

Query: 327  IQRAKKQKPLLENTEVKKGKEKSILFPEEKQSFQDFEKE 443
            +QR K+Q  L    E +K KE S    E K+  + FEKE
Sbjct: 1097 VQRLKEQGSLRTEREREKDKEASRRLEETKERDKKFEKE 1135


>11_01_0682 - 5575297-5575308,5575391-5575516,5575779-5575885,
            5575911-5576013,5576122-5576187,5576378-5576461,
            5577448-5577522,5577615-5577668,5577752-5577895,
            5578632-5578685,5578877-5578981,5579076-5579173,
            5579660-5579729,5580444-5580566,5580647-5580727,
            5580996-5581476,5581684-5581816,5582550-5582598,
            5582704-5582892,5583642-5583703,5583762-5585316
          Length = 1256

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -3

Query: 676  PLRRNSPQTAQNSRTHFGFGINS*TAESSSKNGYVFIQRVVKINRVAVEI 527
            P  +  P+T QN R  F   +      + SKN + +I  +VKI+ +A  I
Sbjct: 1096 PCFKGGPRTIQNLRKRFHLSLTEEELLAPSKNQFAYI--IVKISGIAQAI 1143


>05_01_0367 -
           2874429-2874483,2876274-2876345,2876453-2879613,
           2879715-2879973,2880060-2880346,2880423-2880758,
           2880862-2881003,2881077-2881297,2881379-2881540,
           2881617-2881775,2881860-2882159,2882834-2883097,
           2883133-2883243,2883902-2883988
          Length = 1871

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 574 VFIQRVVKINRVAVEININFPTLHQECPYTYIF 476
           + I RV++ NR++  +N     LH EC    IF
Sbjct: 32  LIIFRVIRFNRLSASLNARTQKLHVECVRNTIF 64


>01_03_0208 + 13797780-13797931,13798234-13798288,13798807-13799943
          Length = 447

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/42 (26%), Positives = 24/42 (57%)
 Frame = -1

Query: 663 TAPKQRRIVEPTLDLGSIHKQQNLHPKMGMCLSREWSK*IEW 538
           TA + ++IV+    +G++  +  + P +G+CLS    + + W
Sbjct: 105 TANRSKQIVDSISPIGALTLEAGILPFLGLCLSTVLGERLAW 146


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,863,682
Number of Sequences: 37544
Number of extensions: 345268
Number of successful extensions: 827
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)