Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0263
         (726 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    29   0.11 
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    25   2.4  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   3.2  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 29.5 bits (63), Expect = 0.11
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +3

Query: 522 ILISTATLFILTTLWINTYPFLDEDSAVYELIPNPKWV 635
           +++ +A + ++ TLW+ TYP  D +         P W+
Sbjct: 270 LIVYSAAVAVVRTLWLRTYPQGDSEGRPCSKAEKPAWM 307


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 585 LDEDSAVYELIPNPKWVLLFCAVWGLFLLRGLMVLHPV 698
           L++  A + +IP+P    +FC ++G+    GL  L  V
Sbjct: 401 LNKFGAAFIMIPDPVVGGIFCVMFGMITAFGLAALQYV 438


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 190 QAVPHPYKSRSGKTNNTINDN 252
           Q  P P    +GKTNN  N+N
Sbjct: 84  QQQPSPVNEGTGKTNNNNNNN 104


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,767
Number of Sequences: 2352
Number of extensions: 14636
Number of successful extensions: 70
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)