Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0263
         (726 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK097433-1|BAC05051.1|  691|Homo sapiens protein ( Homo sapiens ...    32   1.8  
AJ311392-1|CAC60255.1|  691|Homo sapiens putative nuclear protei...    32   1.8  
BC008794-1|AAH08794.1|  984|Homo sapiens POM121 membrane glycopr...    31   5.6  
AK022555-1|BAB14097.1|  523|Homo sapiens protein ( Homo sapiens ...    31   5.6  
AB014518-1|BAA31593.2| 1052|Homo sapiens KIAA0618 protein protein.     31   5.6  

>AK097433-1|BAC05051.1|  691|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40114 fis, clone TESTI2008762. ).
          Length = 691

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 13/44 (29%), Positives = 27/44 (61%)
 Frame = +3

Query: 288 SEPAADPNIVEKIIQRAKKQKPLLENTEVKKGKEKSILFPEEKQ 419
           S+P A+P + E+ +   ++  P++E +  +K K K+I+ P  K+
Sbjct: 384 SDPEANPEVSERKLPTEEEPAPVVEQSGKRKSKTKTIVEPPRKR 427


>AJ311392-1|CAC60255.1|  691|Homo sapiens putative nuclear protein
           protein.
          Length = 691

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 13/44 (29%), Positives = 27/44 (61%)
 Frame = +3

Query: 288 SEPAADPNIVEKIIQRAKKQKPLLENTEVKKGKEKSILFPEEKQ 419
           S+P A+P + E+ +   ++  P++E +  +K K K+I+ P  K+
Sbjct: 384 SDPEANPEVSERKLPTEEEPAPVVEQSGKRKSKTKTIVEPPRKR 427


>BC008794-1|AAH08794.1|  984|Homo sapiens POM121 membrane
           glycoprotein (rat) protein.
          Length = 984

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 682 ISPLRRNSPQTAQNSRTHFGFGINS*TAESSS 587
           ++P+   SP T   S+  FGFGINS ++ S S
Sbjct: 553 VAPITSASPSTDSASKPAFGFGINSVSSSSVS 584


>AK022555-1|BAB14097.1|  523|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12493 fis, clone NT2RM2001635, moderately
           similar to NUCLEAR ENVELOPE PORE MEMBRANE PROTEIN POM
           121. ).
          Length = 523

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 682 ISPLRRNSPQTAQNSRTHFGFGINS*TAESSS 587
           ++P+   SP T   S+  FGFGINS ++ S S
Sbjct: 92  VAPITSASPSTDSASKPAFGFGINSVSSSSVS 123


>AB014518-1|BAA31593.2| 1052|Homo sapiens KIAA0618 protein protein.
          Length = 1052

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 682 ISPLRRNSPQTAQNSRTHFGFGINS*TAESSS 587
           ++P+   SP T   S+  FGFGINS ++ S S
Sbjct: 606 VAPITSASPSTDSASKPAFGFGINSVSSSSVS 637


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,396,300
Number of Sequences: 237096
Number of extensions: 2102569
Number of successful extensions: 4839
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4839
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)