Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0260
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5K8V4 Cluster: Expressed protein; n=1; Filobasidiella ...    36   0.72 
UniRef50_Q8IB52 Cluster: Protein-transport protein sec61 beta 1 ...    34   3.9  
UniRef50_Q22BZ8 Cluster: Putative uncharacterized protein; n=1; ...    33   6.7  
UniRef50_UPI000023D973 Cluster: hypothetical protein FG10234.1; ...    33   8.9  

>UniRef50_Q5K8V4 Cluster: Expressed protein; n=1; Filobasidiella
           neoformans|Rep: Expressed protein - Cryptococcus
           neoformans (Filobasidiella neoformans)
          Length = 695

 Score = 36.3 bits (80), Expect = 0.72
 Identities = 22/51 (43%), Positives = 30/51 (58%)
 Frame = +3

Query: 291 LTALSRELSVPIFVCRLHFILILMHIVYCLKLCLVPTYSSYSTSGMNVTPS 443
           L A SR+++   F   LHFIL L+ +V  L  CL+ TY S  +S  + TPS
Sbjct: 218 LNARSRQVN---FSVSLHFILALILVVVPLVQCLLFTYRSRDSSSTSTTPS 265


>UniRef50_Q8IB52 Cluster: Protein-transport protein sec61 beta 1
           subunit, putative; n=1; Plasmodium falciparum 3D7|Rep:
           Protein-transport protein sec61 beta 1 subunit, putative
           - Plasmodium falciparum (isolate 3D7)
          Length = 102

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +3

Query: 237 NSEVNKYGSMNAGFNVTHLTALSRELSVPIFVCRLHFILILMHIVYCLKLCL 392
           NS V  YG  + GF +T  T L   L     V  LH I  ++ I+ C+ +C+
Sbjct: 40  NSIVKFYGDDSPGFKLTPQTVLISTLIFMASVVILHIIKNIVSILMCISICI 91


>UniRef50_Q22BZ8 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1697

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 18/66 (27%), Positives = 36/66 (54%)
 Frame = -2

Query: 457 QDYCVEGVTFIPEVE*EEYVGTKQSLRQYTICINIRIKCNLQTKIGTLNSLDNAVK*VTL 278
           QDYC +   +I +++  +YVG  +S  Q  + IN +I   +Q   G   ++ NA+  +  
Sbjct: 462 QDYCQDTDGYIRQLDGNQYVGVDKSKYQ-CLEINQQITQPIQCYTGVYRTISNALYQIQQ 520

Query: 277 NPAFID 260
            P++++
Sbjct: 521 QPSYME 526


>UniRef50_UPI000023D973 Cluster: hypothetical protein FG10234.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG10234.1 - Gibberella zeae PH-1
          Length = 779

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 14/37 (37%), Positives = 26/37 (70%), Gaps = 3/37 (8%)
 Frame = -2

Query: 565 KINTIFMLHYDNTISALF---RTIKILVILGRHTDTF 464
           + ++IF++H+D+++SALF   R  K + IL R+ D +
Sbjct: 160 RAHSIFLMHHDSSLSALFVRNRRTKFITILSRYWDLY 196


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,142,436
Number of Sequences: 1657284
Number of extensions: 11813943
Number of successful extensions: 19625
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19624
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)