Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0260
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    25   0.79 
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   1.8  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   4.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   4.2  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   4.2  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   7.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.3  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   7.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.7  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   9.7  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 173 FLPTKAVSPLFPLRQYNP*NYINKQIVNVEF 81
           F+     SP+  + QY P  Y++  IV V F
Sbjct: 196 FIAALFTSPILAITQYGPEEYVDGSIVFVCF 226


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 273 GFNVTHLTALSRELSVPIF 329
           GFN+  L A S E+S P F
Sbjct: 247 GFNMERLLAPSTEVSAPFF 265


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 429 NVTPSTQ*SCHVNVSVCLP 485
           ++TP+   +C V  SVC P
Sbjct: 134 DITPNVTPNCDVKSSVCSP 152


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 429 NVTPSTQ*SCHVNVSVCLP 485
           ++TP+   +C V  SVC P
Sbjct: 134 DITPNVTPNCDVKSSVCSP 152


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -2

Query: 454 DYCVE-GVTFIPEVE*EEYVGTKQSLRQYTICINIR 350
           +Y +E GV  IPE +   +VG       + +C N +
Sbjct: 284 EYGLERGVRVIPEFDAPAHVGEGWQNTDFVVCFNAK 319


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 429 NVTPSTQ*SCHVNVSVCLP 485
           ++TP+   +C V  SVC P
Sbjct: 134 DITPNVTPNCDVKSSVCSP 152


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 74  KYQNTYLTVITY*FYILFRE 15
           +Y +  L  +TY F ILFR+
Sbjct: 75  RYCSVLLVFLTYFFNILFRK 94


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory
          receptor candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 72 ISEYIFDCYNLLILYSF 22
          +   +F CYNL  +Y F
Sbjct: 43 LDSLVFKCYNLRRIYYF 59


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 74  KYQNTYLTVITY*FYILFRE 15
           +Y +  L  +TY F ILFR+
Sbjct: 71  RYCSVLLVFLTYFFNILFRK 90


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 43  VITVKYVF*YFYINSTLTICLLM 111
           ++ +KY   YF ++ T T C L+
Sbjct: 388 LVNLKYRETYFRLSKTKTFCTLV 410


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -1

Query: 137 LRQYNP*NYINKQIVNVEFI*KYQNTYLTVITY*FYIL-FRE 15
           L  Y P    NK+I  +    K+Q+    V+TY   ++ FR+
Sbjct: 352 LLSYVPREVYNKEISRLVETLKFQSITSAVVTYELIVIQFRK 393


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,120
Number of Sequences: 336
Number of extensions: 3639
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)