Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0260
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    25   2.3  
AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    25   3.0  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   9.2  

>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 237 NSEVNKYGSMNAGFNVTHLTALS 305
           NS++N +   N  F + HLTA+S
Sbjct: 349 NSDINSWRFYNLIFFIAHLTAMS 371


>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = +2

Query: 254 VRVNERGVQCNSFNCVIEGVKCTY-FCL*ITFYSDINAYCILS*ALLSTYIFLLFDFR-N 427
           +++ + G  C S+   + GV CT   C  ++  SD     +L    +S  + L  D R  
Sbjct: 30  IQLKDNGKTCKSWPLQLSGVCCTVPRCWQVSLDSDYQIDVVLPLPPISNVVTLDVDRRTG 89

Query: 428 ECYTFNTV 451
           E Y  +T+
Sbjct: 90  EIYWADTI 97


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 407 LLFDFRNECYTFNTVVLSC 463
           L  + R+  YTFN  +LSC
Sbjct: 927 LSIETRHTLYTFNDPILSC 945


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,129
Number of Sequences: 2352
Number of extensions: 14149
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)