Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0259
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical ... 108 4e-24
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 54 1e-07
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 54 2e-07
AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical ... 52 4e-07
AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 46 3e-05
AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical ... 45 7e-05
AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical ... 42 7e-04
AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical ... 40 0.002
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 40 0.002
AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical ... 40 0.003
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 37 0.014
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 37 0.014
AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical ... 37 0.019
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 37 0.019
Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical pr... 36 0.025
Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical p... 36 0.025
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 36 0.025
Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical p... 33 0.18
U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical pr... 32 0.54
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 32 0.54
AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical ... 31 0.71
Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical pr... 31 1.2
U58750-3|AAB00643.2| 350|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z36948-1|CAA85409.1| 180|Caenorhabditis elegans Hypothetical pr... 29 2.9
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 29 5.0
Z68752-3|CAE54905.1| 888|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical pr... 28 8.8
U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeo... 28 8.8
U28730-2|AAA68262.1| 1009|Caenorhabditis elegans Hypothetical pr... 28 8.8
AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox ... 28 8.8
AC006790-9|AAF60735.1| 382|Caenorhabditis elegans Hypothetical ... 28 8.8
>AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical
protein Y71F9AL.10 protein.
Length = 189
Score = 108 bits (260), Expect = 4e-24
Identities = 43/61 (70%), Positives = 49/61 (80%)
Frame = +3
Query: 255 RPRLSYNEDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCPEHPG 434
RP+++YN+DVL D KGEC ICLE+L AG IARLPCLCIYHK CID WF+ CPEHPG
Sbjct: 128 RPKITYNDDVLKDDKGECSICLEDLEAGHKIARLPCLCIYHKQCIDDWFKRKNCCPEHPG 187
Query: 435 D 437
D
Sbjct: 188 D 188
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +1
Query: 130 GTTNSHNGERNYARKEIGIKCPVCSKFVLPDDIECHLVMCLT 255
G + H+ R+ + +KCPVC K V DD + HLVMCLT
Sbjct: 86 GRLHGHHSRRSVPVFMMDMKCPVCHKVVPSDDADIHLVMCLT 127
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 54.0 bits (124), Expect = 1e-07
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 258 PRLSYNEDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 422
P ++ + + + +C +CL+ D I LPC IYHK CID W +R+CP
Sbjct: 211 PTMTITPGMTQELQSDCAVCLDPYQLQDVIRLLPCKHIYHKSCIDPWLLEHRTCP 265
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 53.6 bits (123), Expect = 2e-07
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = +3
Query: 288 SDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 422
S +G C IC E+L D I+ + C IYH GCI QW R CP
Sbjct: 7 SSLQGSCSICFEDLKQNDKISAIVCGHIYHHGCISQWIATKRQCP 51
>AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical
protein C18B12.4 protein.
Length = 456
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 195 GVQQVRFTGRHRVPSRNVPDRPRLSYNEDVLSDSKGECVICLEELSAGDTIARLPCLCIY 374
G + R + R+ RN+ P Y L D C ICLE ++G+ + LPC ++
Sbjct: 213 GCVERRKLNKRRLSKRNLKKIPVKKYR---LGDDPDTCAICLESFASGEKLRHLPCRHVF 269
Query: 375 HKGCIDQWF-EVNRSCP 422
H CID W + + CP
Sbjct: 270 HCNCIDVWLTQTRKICP 286
>AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical
protein Y73C8C.7 protein.
Length = 574
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 303 ECVICLEELSAG-DTIARLPCLCIYHKGCIDQWFEVNRSCP 422
EC++CLE++ +T+ L C YH GC +WF+V R CP
Sbjct: 518 ECLVCLEDMKEEHETLKCLDCKRKYHTGCAQKWFKVKRICP 558
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 46.0 bits (104), Expect = 3e-05
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 291 DSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 422
+ + C +CL G++I +L C ++H CI +W ++N+ CP
Sbjct: 428 EDEDTCTVCLSSFEDGESIQKLRCNHVFHPECIYKWLDINKRCP 471
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 46.0 bits (104), Expect = 3e-05
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 306 CVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 422
C+IC EE++ + RLPC ++H C+ WF+ ++CP
Sbjct: 292 CIICREEMTVDASPKRLPCSHVFHAHCLRSWFQRQQTCP 330
>Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical
protein C01G6.4 protein.
Length = 170
Score = 46.0 bits (104), Expect = 3e-05
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +3
Query: 294 SKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 422
+ EC IC+ + G+ I LPC+ +H+ C+D+W + +CP
Sbjct: 91 TSNECAICMIDFEPGERIRFLPCMHSFHQECVDEWLMKSFTCP 133
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 258 PRLSYNEDVLSDSKG--ECVICLEELSAG-DTIARLPCLCIYHKGCIDQWFEVNRSCP 422
P L E + SD EC++CLE++ DT+ C YH C+ +WF++ R CP
Sbjct: 882 PLLKLPETIKSDELDDKECLVCLEDMVKNQDTVKCSTCKRQYHTTCVQKWFKIKRICP 939
>AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical
protein Y73C8C.8 protein.
Length = 946
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 267 SYNEDVLSDSKGECVICLEEL-SAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 422
S D L D EC++CLE++ +T+ C YH GC +WF+V R CP
Sbjct: 880 SQKSDDLEDK--ECLVCLEDMMEEHETLKCSNCKRQYHTGCAQKWFKVKRICP 930
>AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical
protein Y54E10BR.3 protein.
Length = 304
Score = 41.5 bits (93), Expect = 7e-04
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 291 DSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 422
D+ +C C + + + L C I+H+ CI+ W + SCP
Sbjct: 233 DNGAQCTTCFDTFKLDEDVGALDCNHIFHRPCIEPWLKTKNSCP 276
>AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.11 protein.
Length = 487
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +3
Query: 306 CVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 422
CVICLEE G + L C +H C+D W R CP
Sbjct: 317 CVICLEEYEEGTELRVLFCGHEFHPKCVDPWLLSKRRCP 355
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 276 EDVLSDSKGECVICLEELS-AGDTIARLPCLCIYHKGCIDQWFEVNRSCPE 425
E+V+ + G C+IC E + A +T+ C YH CI +W ++N CP+
Sbjct: 2098 EEVVEEEDG-CLICTEIIEEAVETVTCDTCTREYHYHCISRWLKINSVCPQ 2147
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 276 EDVLSDSKGECVICLEELS-AGDTIARLPCLCIYHKGCIDQWFEVNRSCPE 425
E+V+ + G C+IC E + A +T+ C YH CI +W ++N CP+
Sbjct: 2098 EEVVEEEDG-CLICTEIIEEAVETVTCDTCTREYHYHCISRWLKINSVCPQ 2147
>AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical
protein Y105C5B.11 protein.
Length = 583
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 273 NEDVLSDSKGECVICLEELSAGDTIARLP-CLCIYHKGCIDQWFEVNRSCPE 425
+ + + + EC+IC E++ + + P C IYH C QW +CP+
Sbjct: 517 SSNATEEFESECIICREDIDLENGTVQCPRCTEIYHSHCATQWLSQKPTCPK 568
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Frame = +3
Query: 201 QQVRFTGRHRVPS--RNVPDRPRL---SYNEDVLSDSKGECVICLEELSAGDTIARLPCL 365
Q + TG +VP R + +P + S L D+ EC ICL+E++ + C
Sbjct: 988 QSITPTGLSQVPMSPRKLFSQPNIVTASITSTELDDT--ECAICLDEMTNFKETIKCQCR 1045
Query: 366 CIYHKGCIDQWFEVNRSCP 422
+H C +W R CP
Sbjct: 1046 RRFHLECATKWLNEKRECP 1064
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Frame = +3
Query: 201 QQVRFTGRHRVPS--RNVPDRPRL---SYNEDVLSDSKGECVICLEELSAGDTIARLPCL 365
Q + TG +VP R + +P + S L D+ EC ICL+E++ + C
Sbjct: 1022 QSITPTGLSQVPMSPRKLFSQPNIVTASITSTELDDT--ECAICLDEMTNFKETIKCQCR 1079
Query: 366 CIYHKGCIDQWFEVNRSCP 422
+H C +W R CP
Sbjct: 1080 RRFHLECATKWLNEKRECP 1098
>AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical
protein Y52E8A.2 protein.
Length = 192
Score = 36.7 bits (81), Expect = 0.019
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +3
Query: 258 PRLSYNEDVLSDSK----GECVICLEE-LSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 422
P +S++ + S S C+ICL++ +S TI C +H C QWF+ CP
Sbjct: 118 PSVSFSSSISSSSAELSDARCLICLDDVISTEKTIKCNSCRRRFHLDCASQWFKEKSVCP 177
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 36.7 bits (81), Expect = 0.019
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Frame = +3
Query: 201 QQVRFTGRHRVPSR-----NVPDRPRLSYNEDVLSDSKGECVICLEELSAGDTIARLPCL 365
Q + TG +VP + PD S L D+ EC ICL+E++ + C
Sbjct: 697 QSITPTGLSQVPMSPRKLFSQPDIVTASVPSTELDDT--ECAICLDEMTNFKETIKCECR 754
Query: 366 CIYHKGCIDQWFEVNRSCP 422
+H C +W R CP
Sbjct: 755 RRFHLKCATKWLNEKRECP 773
>Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 36.3 bits (80), Expect = 0.025
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +3
Query: 222 RHRVPSRNVPDRPRLSYNEDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWF 401
RHR + + + SY ++ CV+C E L T RLPC +H C+ W
Sbjct: 308 RHR-NHKKIFEHIERSYPSVKCANGDDRCVVCWELLG---TSRRLPCSHQFHDWCLMWWL 363
Query: 402 EVNRSCP 422
+ SCP
Sbjct: 364 AQDSSCP 370
>Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 36.3 bits (80), Expect = 0.025
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +3
Query: 222 RHRVPSRNVPDRPRLSYNEDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWF 401
RHR + + + SY ++ CV+C E L T RLPC +H C+ W
Sbjct: 308 RHR-NHKKIFEHIERSYPSVKCANGDDRCVVCWELLG---TSRRLPCSHQFHDWCLMWWL 363
Query: 402 EVNRSCP 422
+ SCP
Sbjct: 364 AQDSSCP 370
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 36.3 bits (80), Expect = 0.025
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 303 ECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 422
EC ICLEE+ + C +H C +W R CP
Sbjct: 441 ECAICLEEMYNFKETIKCECRRRFHSKCATKWLNEKRECP 480
>Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical
protein ZK637.14 protein.
Length = 161
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +3
Query: 264 LSYNEDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 422
L N D+ D + + ++ + G T+ +PC +H C+ W E ++CP
Sbjct: 79 LQNNVDIPEDHVIKEELKIDPTTFGTTVIVMPCKHRFHYFCLTLWLEAQQTCP 131
>U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical
protein R10A10.2 protein.
Length = 112
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 303 ECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 422
EC+ C E SA + C +H C+ QW N CP
Sbjct: 60 ECLRCQSEPSAECYVVWGDCNHSFHHCCMTQWIRQNNRCP 99
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 31.9 bits (69), Expect = 0.54
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 306 CVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 422
C +CLE + D++ + C +H C++QW + +CP
Sbjct: 260 CAVCLERMD--DSVLAILCNHSFHARCLEQW--ADNTCP 294
>AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical
protein Y119C1B.5 protein.
Length = 754
Score = 31.5 bits (68), Expect = 0.71
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 261 RLSYNEDV-LSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 422
RLS + V L + + C IC E+ I PC +H C+ +W V CP
Sbjct: 588 RLSKADVVQLREREDVCAICFIEMKEEARIT--PCKHYFHGPCLRKWLAVKMVCP 640
>Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical
protein F54B11.5 protein.
Length = 201
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 288 SDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNR--SCP 422
SD +G CVIC+E ++ D + LPCL + CI E SCP
Sbjct: 123 SDVEGNCVICMENIN--DLL--LPCLHAFCIRCIANEMEYRHDFSCP 165
>U58750-3|AAB00643.2| 350|Caenorhabditis elegans Hypothetical
protein F55G1.6 protein.
Length = 350
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = +3
Query: 288 SDSKGECVICLEE--LSAGDTIA-RL-PCLC--IYHKGCIDQWFEVNRSCPE 425
S S G C C + L GD + +L PC C ++H GC+ E SC E
Sbjct: 112 STSPGTCTNCNDSNYLEDGDVLGYKLKPCFCRKLFHFGCLRSLIEEQASCSE 163
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 279 DVLSDSKG-ECVICLEELSAGDTIARLPC--LCIYHKGCIDQWFEVNRSCP 422
+ + D G EC+ICL ++ DT+ LPC LC+ C D + +CP
Sbjct: 259 ETMDDDSGLECIICLSDIR--DTVI-LPCRHLCVC-SNCADSLRYKHNNCP 305
>Z36948-1|CAA85409.1| 180|Caenorhabditis elegans Hypothetical
protein D2089.2 protein.
Length = 180
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = +3
Query: 306 CVICLEELSAGDTIARLPCLC-----IYHKGCIDQW 398
C IC + ++ D++ + PC C H GC++QW
Sbjct: 25 CRICFDNDTSSDSLIK-PCSCSGTVAYVHNGCLEQW 59
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +3
Query: 276 EDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCI 389
ED D CVIC E RL C ++H C+
Sbjct: 3507 EDAAQDGDDVCVICFTERLGAAPCIRLGCGHMFHFHCV 3544
>Z68752-3|CAE54905.1| 888|Caenorhabditis elegans Hypothetical
protein T12G3.2c protein.
Length = 888
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -2
Query: 521 HKFSLFFLLIFTMPSGFTVCLSALDGALVAGVLRTRPVHFEPL 393
HK +L L F +G T+C + A +RP+H EPL
Sbjct: 626 HKSALIMRLSFV--TGGTICFTVKSLAHTLDPRSSRPIHLEPL 666
>Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical
protein T12G3.2b protein.
Length = 912
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -2
Query: 521 HKFSLFFLLIFTMPSGFTVCLSALDGALVAGVLRTRPVHFEPL 393
HK +L L F +G T+C + A +RP+H EPL
Sbjct: 626 HKSALIMRLSFV--TGGTICFTVKSLAHTLDPRSSRPIHLEPL 666
>Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical
protein T12G3.2a protein.
Length = 928
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -2
Query: 521 HKFSLFFLLIFTMPSGFTVCLSALDGALVAGVLRTRPVHFEPL 393
HK +L L F +G T+C + A +RP+H EPL
Sbjct: 626 HKSALIMRLSFV--TGGTICFTVKSLAHTLDPRSSRPIHLEPL 666
>Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical
protein T02C1.2 protein.
Length = 275
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +3
Query: 273 NEDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 422
N + L + C IC + + T L C + K CIDQ + R CP
Sbjct: 89 NSNDLDEDDVLCTICYDIIVEPHT---LRCQHSFCKKCIDQCLPLTRKCP 135
>U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeobox
protein 14 protein.
Length = 351
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 157 RNYARKEIGIKCPVCSKFVLPDDIECHLVMCLTGHVY 267
R + K+ G KC C++ ++PD H+V + HVY
Sbjct: 96 RAHFYKKFGTKCSSCNEGIVPD----HVVRKASNHVY 128
>U28730-2|AAA68262.1| 1009|Caenorhabditis elegans Hypothetical
protein K10B2.5 protein.
Length = 1009
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -3
Query: 124 LDPSQNNITALRSRN-NKCNKNKIDHTSKTKLFMRSFHTFTP 2
LD + + L +RN +K + N++DH KT+ + F T TP
Sbjct: 216 LDGTPKRPSPLTTRNIHKVDINRMDHLMKTENTVAGFITLTP 257
>AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox
protein CEH-14 protein.
Length = 351
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 157 RNYARKEIGIKCPVCSKFVLPDDIECHLVMCLTGHVY 267
R + K+ G KC C++ ++PD H+V + HVY
Sbjct: 96 RAHFYKKFGTKCSSCNEGIVPD----HVVRKASNHVY 128
>AC006790-9|AAF60735.1| 382|Caenorhabditis elegans Hypothetical
protein Y49F6B.9 protein.
Length = 382
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 264 LSYNEDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVN 410
L + E+ S + EC +C E + AG + C +Y + CI ++ E++
Sbjct: 29 LKFQEE--SGAMKECELCCEMVPAGAFCQLINCRHVYCRICIRKYMELS 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,169,282
Number of Sequences: 27780
Number of extensions: 297596
Number of successful extensions: 791
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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