BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0258 (684 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_02_1354 - 26337628-26338540,26339638-26339981 32 0.37 04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019 30 1.5 05_01_0446 - 3551754-3551795,3551932-3552397,3552424-3552921,355... 29 2.6 03_06_0072 - 31469595-31469684,31469762-31469848,31469968-314700... 29 2.6 06_03_1512 - 30688098-30688133,30688401-30688537,30688744-306888... 29 3.4 11_06_0553 - 24920428-24921057,24921149-24921276,24921372-249214... 29 4.5 10_08_0438 + 17919355-17919391,17919491-17919544,17919928-179201... 29 4.5 03_06_0554 + 34691050-34691242,34691327-34691394,34691754-34692275 29 4.5 10_08_0078 + 14699588-14700645,14700739-14700874,14701076-14701096 28 6.0 03_01_0369 - 2863159-2863491,2864149-2864214,2865045-2865140,286... 28 7.9 >08_02_1354 - 26337628-26338540,26339638-26339981 Length = 418 Score = 32.3 bits (70), Expect = 0.37 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -3 Query: 430 APSPFTVKPSTSAGRDLTFCALRSATISSVRNSTSSLSP 314 +PSP T PST+ GRD C R + + N +L+P Sbjct: 168 SPSPATRSPSTTLGRDRYCCLTREDIVRFLINCLGALAP 206 >04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019 Length = 508 Score = 30.3 bits (65), Expect = 1.5 Identities = 13/43 (30%), Positives = 26/43 (60%) Frame = +3 Query: 327 LVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQL 455 LV F+ ++ E K + ++ L E+E F + +G+EV L++ + Sbjct: 461 LVGFIFTLLLPESKGKSLEDLTGEIEEFQEEDEGSEVALSRPI 503 >05_01_0446 - 3551754-3551795,3551932-3552397,3552424-3552921, 3553288-3553334 Length = 350 Score = 29.5 bits (63), Expect = 2.6 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = +3 Query: 492 HTVDSETLRVMFRLRSKSSLRCV-PNLSLRLT 584 H + E L +MFR RS S +C+ P+ LR T Sbjct: 170 HELTVENLNIMFRARSSSKAQCITPSQRLRQT 201 >03_06_0072 - 31469595-31469684,31469762-31469848,31469968-31470036, 31470117-31470185,31470269-31471306 Length = 450 Score = 29.5 bits (63), Expect = 2.6 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Frame = -3 Query: 442 KTTSAPSPFTVKPSTSA-GRDLTFCALRSATISSVRNSTSSLSPFV*SAFNPQ---PQLQ 275 ++ + +P PS+ A G + F + + V S+ S SP + SAFNP P LQ Sbjct: 103 RSCATKAPVNDPPSSLAIGLLMVFTSGMGSATGRVGASSLSASPSISSAFNPAALLPFLQ 162 Query: 274 VLEWL 260 +WL Sbjct: 163 ATKWL 167 >06_03_1512 - 30688098-30688133,30688401-30688537,30688744-30688834, 30689265-30690815 Length = 604 Score = 29.1 bits (62), Expect = 3.4 Identities = 15/46 (32%), Positives = 26/46 (56%) Frame = -3 Query: 334 STSSLSPFV*SAFNPQPQLQVLEWLCRSWWKPGSHLTFESSSCAIY 197 +TSS + + ++ +PQPQ L RS +PG+ L ++ C+ Y Sbjct: 2 ATSSTATIIAASSSPQPQPLFLLLRLRSRARPGARLRAAAARCSSY 47 >11_06_0553 - 24920428-24921057,24921149-24921276,24921372-24921409, 24921522-24921734,24921906-24921998,24922089-24922276, 24922396-24922502,24922614-24922775,24922870-24922953, 24923060-24923168,24923340-24923468,24923504-24923556, 24923654-24923759,24924082-24924189 Length = 715 Score = 28.7 bits (61), Expect = 4.5 Identities = 18/44 (40%), Positives = 27/44 (61%) Frame = -3 Query: 541 LLLSLNITLKVSESTV*LTLNVTRIVSSLSCFVKTTSAPSPFTV 410 L LSL+++L +S S + L L + ++ L+CF T PSP TV Sbjct: 4 LTLSLSLSLSISFSFLELELCIDGHLAPLNCFPLT---PSPLTV 44 >10_08_0438 + 17919355-17919391,17919491-17919544,17919928-17920186, 17920396-17920484,17920645-17920775,17920900-17920946, 17921029-17921137,17921217-17921303,17921521-17921692, 17921837-17922309,17922402-17922463,17922537-17922639, 17923535-17923636 Length = 574 Score = 28.7 bits (61), Expect = 4.5 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 1/80 (1%) Frame = +3 Query: 303 LHTKGER-ELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETIRVT 479 LH+ E+ E+V+ + E++ KV A + GF V+G+ V +TK KDET+ Sbjct: 397 LHSDQEKDEIVKPMEEDV-------KVIEKTATMRGFKVEGEDIPV-MTKVPKDETLDSR 448 Query: 480 FNVNHTVDSETLRVMFRLRS 539 H + ++ L V L+S Sbjct: 449 DETCHVIYTQNLVVKSILQS 468 >03_06_0554 + 34691050-34691242,34691327-34691394,34691754-34692275 Length = 260 Score = 28.7 bits (61), Expect = 4.5 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = -2 Query: 659 FISRSCRWILKIGAGENQGWCLLGLGQ-PQTEVWNASQRTLASQSEHH 519 F + CR+ + A NQ WC G G+ P ++ A +R A++++ H Sbjct: 214 FAAEFCRFEENLAADRNQRWCGSGAGESPVYQIRTAPER--AARTKRH 259 >10_08_0078 + 14699588-14700645,14700739-14700874,14701076-14701096 Length = 404 Score = 28.3 bits (60), Expect = 6.0 Identities = 13/45 (28%), Positives = 20/45 (44%) Frame = -2 Query: 638 WILKIGAGENQGWCLLGLGQPQTEVWNASQRTLASQSEHHPQSLR 504 W L + + W +L L EV++ S + EHHP+ R Sbjct: 356 WRLAVVHPVSVSWLVLSLSGRAAEVYDLSNSMKFTSHEHHPKEAR 400 >03_01_0369 - 2863159-2863491,2864149-2864214,2865045-2865140, 2865530-2865632,2865771-2865838,2866570-2866712, 2867050-2867242,2867602-2867640,2867742-2867807, 2868617-2869651 Length = 713 Score = 27.9 bits (59), Expect = 7.9 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -3 Query: 442 KTTSAPSPFTVKPSTSAGRDLTFCALRSATISS 344 + + PS + + + GR LTF LRSA +S+ Sbjct: 41 RADACPSAVALADAAAGGRALTFAELRSAVLST 73 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,798,958 Number of Sequences: 37544 Number of extensions: 368841 Number of successful extensions: 1018 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1000 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1017 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1733104716 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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