Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0255
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    24   1.4  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   3.2  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   5.5  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.7  

>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 447 SIVTSIFGFVSSSPRLSPCLIISC 376
           +I+TSI   V S   +S CLI +C
Sbjct: 3   TIITSIILLVLSESLVSGCLITNC 26


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 228 YQAVDQFVTIIAFLVSVADPLLFMQYKDS 314
           Y+A  + +  IAF     DP+ ++QY ++
Sbjct: 229 YRARRKEIAEIAFAYKYGDPIPYIQYTET 257


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 1   IRAASLICVLIYFSRHLCNVVSTE 72
           I+   ++   +Y+  H+C  VSTE
Sbjct: 255 IKNCVIVIFELYYLSHVCQNVSTE 278


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 214 SKSRRIKLSINLLR*LHFW 270
           + S+ +KLSIN++  +  W
Sbjct: 188 ASSKTLKLSINIISLVQLW 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,476
Number of Sequences: 336
Number of extensions: 3098
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)