Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0255
         (699 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015529-1|AAH15529.2|  311|Homo sapiens ribose 5-phosphate isom...   107   5e-23
AY050633-1|AAK95569.1|  237|Homo sapiens ribose 5-phosphate isom...   107   5e-23
AC096579-1|AAY24200.1|  177|Homo sapiens unknown protein.              67   7e-11
AC062029-2|AAY14778.1|   60|Homo sapiens unknown protein.              60   7e-09

>BC015529-1|AAH15529.2|  311|Homo sapiens ribose 5-phosphate
           isomerase A (ribose 5-phosphate epimerase) protein.
          Length = 311

 Score =  107 bits (256), Expect = 5e-23
 Identities = 46/77 (59%), Positives = 65/77 (84%)
 Frame = +2

Query: 254 DNCIFGVGSGSTVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELETNPNI 433
           +N + G+GSGST+V+AVQR+AERV+ E L + CIPTSFQA+QLI+++GL L +L+ +P I
Sbjct: 96  NNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQARQLILQYGLTLSDLDRHPEI 155

Query: 434 DVTIDGADEVDSNMTLI 484
           D+ IDGADEVD+++ LI
Sbjct: 156 DLAIDGADEVDADLNLI 172



 Score = 66.9 bits (156), Expect = 7e-11
 Identities = 29/52 (55%), Positives = 39/52 (75%)
 Frame = +1

Query: 493 GRVSVKEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMAYVPIKK 648
           G    +EKI+A  + + IVIAD+ KDS  LGD++ KG+PIEVIPMAYVP+ +
Sbjct: 176 GGCLTQEKIVAGYASRFIVIADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSR 227


>AY050633-1|AAK95569.1|  237|Homo sapiens ribose 5-phosphate
           isomerase protein.
          Length = 237

 Score =  107 bits (256), Expect = 5e-23
 Identities = 46/77 (59%), Positives = 65/77 (84%)
 Frame = +2

Query: 254 DNCIFGVGSGSTVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELETNPNI 433
           +N + G+GSGST+V+AVQR+AERV+ E L + CIPTSFQA+QLI+++GL L +L+ +P I
Sbjct: 22  NNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQARQLILQYGLTLSDLDRHPEI 81

Query: 434 DVTIDGADEVDSNMTLI 484
           D+ IDGADEVD+++ LI
Sbjct: 82  DLAIDGADEVDADLNLI 98



 Score = 66.9 bits (156), Expect = 7e-11
 Identities = 29/52 (55%), Positives = 39/52 (75%)
 Frame = +1

Query: 493 GRVSVKEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMAYVPIKK 648
           G    +EKI+A  + + IVIAD+ KDS  LGD++ KG+PIEVIPMAYVP+ +
Sbjct: 102 GGCLTQEKIVAGYASRFIVIADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSR 153


>AC096579-1|AAY24200.1|  177|Homo sapiens unknown protein.
          Length = 177

 Score = 66.9 bits (156), Expect = 7e-11
 Identities = 29/52 (55%), Positives = 39/52 (75%)
 Frame = +1

Query: 493 GRVSVKEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMAYVPIKK 648
           G    +EKI+A  + + IVIAD+ KDS  LGD++ KG+PIEVIPMAYVP+ +
Sbjct: 42  GGCLTQEKIVAGYASRFIVIADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSR 93



 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 21/38 (55%), Positives = 32/38 (84%)
 Frame = +2

Query: 371 AKQLIIKHGLNLGELETNPNIDVTIDGADEVDSNMTLI 484
           A+QLI+++GL L +L+ +P ID+ IDGADEVD+++ LI
Sbjct: 1   ARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLI 38


>AC062029-2|AAY14778.1|   60|Homo sapiens unknown protein.
          Length = 60

 Score = 60.1 bits (139), Expect = 7e-09
 Identities = 25/39 (64%), Positives = 33/39 (84%)
 Frame = +2

Query: 254 DNCIFGVGSGSTVVYAVQRLAERVESEKLKVTCIPTSFQ 370
           +N + G+GSGST+V+AVQR+AERV+ E L + CIPTSFQ
Sbjct: 22  NNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQ 60


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,148,415
Number of Sequences: 237096
Number of extensions: 1559054
Number of successful extensions: 2950
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2947
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)