Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0254
(546 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 134 1e-30
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 124 1e-27
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 101 1e-20
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 96 4e-19
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 95 9e-19
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 91 1e-17
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 89 6e-17
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 86 6e-16
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 82 9e-15
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 81 1e-14
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 81 2e-14
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 79 5e-14
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 78 2e-13
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 77 3e-13
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 77 3e-13
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 76 6e-13
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 75 1e-12
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 75 1e-12
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 74 2e-12
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 74 2e-12
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 74 2e-12
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 73 3e-12
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 73 3e-12
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 73 4e-12
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 73 4e-12
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 73 6e-12
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 73 6e-12
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 72 8e-12
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 71 1e-11
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 71 2e-11
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 71 2e-11
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 71 2e-11
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 70 3e-11
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 70 4e-11
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 69 5e-11
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 69 5e-11
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 69 5e-11
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 69 5e-11
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 69 7e-11
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 69 7e-11
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 69 9e-11
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 68 1e-10
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 68 1e-10
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 68 2e-10
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 67 2e-10
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 67 2e-10
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 67 2e-10
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 67 2e-10
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 67 3e-10
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 67 3e-10
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 67 3e-10
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 67 3e-10
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 67 3e-10
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 67 3e-10
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 66 4e-10
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 66 4e-10
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 66 4e-10
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 66 4e-10
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 66 5e-10
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 66 5e-10
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 66 5e-10
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 66 7e-10
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 66 7e-10
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 66 7e-10
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 66 7e-10
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 65 9e-10
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 65 9e-10
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 65 9e-10
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 65 9e-10
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 65 9e-10
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 65 9e-10
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 65 9e-10
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 65 1e-09
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 65 1e-09
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 65 1e-09
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 65 1e-09
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 65 1e-09
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 64 2e-09
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 64 2e-09
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 64 2e-09
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 64 2e-09
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 64 2e-09
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 64 2e-09
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 64 2e-09
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 64 3e-09
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 64 3e-09
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 64 3e-09
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 64 3e-09
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 63 4e-09
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 63 4e-09
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 63 4e-09
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 63 4e-09
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 63 4e-09
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 63 5e-09
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 63 5e-09
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 63 5e-09
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 63 5e-09
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 63 5e-09
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 62 6e-09
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 62 6e-09
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 62 6e-09
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 62 8e-09
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 62 8e-09
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 62 8e-09
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 62 8e-09
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 62 8e-09
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 62 8e-09
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 8e-09
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 62 8e-09
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 62 1e-08
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 62 1e-08
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 1e-08
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 62 1e-08
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 62 1e-08
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 62 1e-08
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 62 1e-08
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 62 1e-08
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 61 1e-08
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 61 1e-08
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 61 1e-08
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 61 1e-08
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 61 1e-08
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 61 1e-08
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 61 1e-08
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 61 1e-08
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 61 1e-08
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 61 1e-08
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 61 2e-08
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 61 2e-08
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 61 2e-08
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 61 2e-08
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 61 2e-08
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 61 2e-08
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 61 2e-08
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 61 2e-08
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 60 2e-08
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 60 2e-08
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 60 2e-08
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 60 2e-08
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 60 2e-08
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 60 2e-08
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 60 3e-08
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 60 3e-08
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 60 3e-08
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 60 3e-08
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 60 3e-08
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 60 3e-08
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 60 3e-08
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 60 3e-08
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 60 3e-08
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 60 3e-08
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 60 3e-08
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 60 3e-08
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 60 3e-08
UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic... 60 4e-08
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 60 4e-08
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 60 4e-08
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 60 4e-08
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 60 4e-08
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 59 6e-08
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 59 6e-08
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 59 6e-08
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 59 6e-08
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 59 6e-08
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 59 6e-08
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 59 8e-08
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 59 8e-08
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 59 8e-08
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 59 8e-08
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 59 8e-08
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 59 8e-08
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 59 8e-08
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 59 8e-08
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 59 8e-08
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 58 1e-07
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 58 1e-07
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 58 1e-07
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 58 1e-07
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 58 1e-07
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 58 1e-07
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 58 1e-07
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 58 1e-07
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 58 1e-07
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 58 1e-07
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 58 1e-07
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 58 1e-07
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 58 1e-07
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 58 1e-07
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 58 1e-07
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 58 1e-07
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 58 1e-07
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 58 1e-07
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 58 2e-07
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 58 2e-07
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 58 2e-07
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 58 2e-07
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 58 2e-07
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 58 2e-07
UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic... 57 2e-07
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 57 2e-07
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 57 2e-07
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 57 2e-07
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 57 2e-07
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 57 2e-07
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 57 2e-07
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 57 3e-07
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 57 3e-07
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 57 3e-07
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 57 3e-07
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 57 3e-07
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 57 3e-07
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 57 3e-07
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 57 3e-07
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 57 3e-07
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 56 4e-07
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 56 4e-07
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 56 4e-07
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 56 4e-07
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 56 4e-07
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 56 4e-07
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 56 4e-07
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 56 5e-07
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 56 5e-07
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 56 5e-07
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 56 5e-07
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 56 5e-07
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 56 5e-07
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 56 5e-07
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 56 5e-07
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 56 5e-07
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 56 5e-07
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 56 7e-07
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 56 7e-07
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 56 7e-07
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 56 7e-07
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 56 7e-07
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 56 7e-07
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 56 7e-07
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 56 7e-07
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 55 9e-07
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 55 9e-07
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 55 9e-07
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 55 9e-07
UniRef50_A3J7I3 Cluster: ATP-independent RNA helicase; n=5; Bact... 55 9e-07
UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL' ... 55 9e-07
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 55 9e-07
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 55 9e-07
UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|R... 55 9e-07
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 55 9e-07
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 55 9e-07
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 55 9e-07
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 55 1e-06
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 55 1e-06
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 55 1e-06
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 55 1e-06
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 55 1e-06
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 55 1e-06
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 55 1e-06
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 55 1e-06
UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genom... 55 1e-06
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 55 1e-06
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 55 1e-06
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 55 1e-06
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 55 1e-06
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 55 1e-06
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 55 1e-06
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 55 1e-06
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 54 2e-06
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 54 2e-06
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 54 2e-06
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 54 2e-06
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 54 2e-06
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein; ... 54 2e-06
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 54 2e-06
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 54 2e-06
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 54 2e-06
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 54 2e-06
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 54 2e-06
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 54 2e-06
UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 54 2e-06
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 54 2e-06
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 54 2e-06
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 54 3e-06
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 54 3e-06
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 54 3e-06
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 54 3e-06
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 54 3e-06
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 54 3e-06
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 54 3e-06
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 54 3e-06
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 53 4e-06
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 53 4e-06
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 53 4e-06
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 53 4e-06
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 53 4e-06
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 53 4e-06
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 53 4e-06
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 53 4e-06
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 53 4e-06
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 53 4e-06
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 53 4e-06
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 53 4e-06
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 53 4e-06
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 53 4e-06
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 53 4e-06
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 53 4e-06
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 53 5e-06
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 53 5e-06
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 53 5e-06
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 53 5e-06
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 53 5e-06
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 53 5e-06
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 53 5e-06
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 53 5e-06
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 53 5e-06
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 53 5e-06
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 53 5e-06
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 53 5e-06
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 53 5e-06
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 53 5e-06
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 53 5e-06
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 53 5e-06
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 52 7e-06
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 52 7e-06
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 52 7e-06
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 52 7e-06
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 52 7e-06
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 52 7e-06
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 52 7e-06
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 52 7e-06
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 52 7e-06
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 52 7e-06
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 52 7e-06
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 52 7e-06
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 52 7e-06
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 52 7e-06
UniRef50_Q6FU81 Cluster: ATP-dependent RNA helicase MSS116, mito... 52 7e-06
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 52 7e-06
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 52 9e-06
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 52 9e-06
UniRef50_Q5CKB1 Cluster: ATP-dependent RNA helicase; n=2; Crypto... 52 9e-06
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 52 9e-06
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 52 9e-06
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 52 9e-06
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 52 9e-06
UniRef50_Q3E9C3 Cluster: DEAD-box ATP-dependent RNA helicase 58,... 52 9e-06
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 52 1e-05
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 52 1e-05
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 52 1e-05
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 52 1e-05
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 52 1e-05
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 52 1e-05
UniRef50_Q9FQ91 Cluster: Putative chloroplast RNA helicase VDL' ... 52 1e-05
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 52 1e-05
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 52 1e-05
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 52 1e-05
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 52 1e-05
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 52 1e-05
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 52 1e-05
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 52 1e-05
UniRef50_P15424 Cluster: ATP-dependent RNA helicase MSS116, mito... 52 1e-05
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 51 2e-05
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 51 2e-05
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 51 2e-05
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 51 2e-05
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 51 2e-05
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 51 2e-05
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 51 2e-05
UniRef50_A7TSU7 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 51 2e-05
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 51 2e-05
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 51 2e-05
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 51 2e-05
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 51 2e-05
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 51 2e-05
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 51 2e-05
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 51 2e-05
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 51 2e-05
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 51 2e-05
UniRef50_A7ECJ8 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 51 2e-05
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 51 2e-05
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 51 2e-05
UniRef50_UPI0000E23613 Cluster: PREDICTED: similar to eukaryotic... 50 3e-05
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 50 3e-05
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 50 3e-05
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 50 3e-05
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 50 3e-05
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 50 3e-05
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 50 3e-05
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 50 3e-05
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 50 3e-05
UniRef50_Q7Q0A7 Cluster: ENSANGP00000011621; n=5; Endopterygota|... 50 3e-05
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 50 3e-05
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 50 3e-05
UniRef50_A7ANF1 Cluster: DEAD/DEAH box domain containing protein... 50 3e-05
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 50 3e-05
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 50 3e-05
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 50 3e-05
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 50 3e-05
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 50 3e-05
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 50 4e-05
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 50 4e-05
UniRef50_Q8EUW5 Cluster: ATP-dependent RNA helicase; n=1; Mycopl... 50 4e-05
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 50 4e-05
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 50 4e-05
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 50 4e-05
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 50 4e-05
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 50 4e-05
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 50 4e-05
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 50 4e-05
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 50 4e-05
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 50 4e-05
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 50 4e-05
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 50 4e-05
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 50 4e-05
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 50 4e-05
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 50 4e-05
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 50 5e-05
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 50 5e-05
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 50 5e-05
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 50 5e-05
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 50 5e-05
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 50 5e-05
UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein; ... 50 5e-05
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 50 5e-05
UniRef50_Q7FGZ2 Cluster: DEAD-box ATP-dependent RNA helicase 1; ... 50 5e-05
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 50 5e-05
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 50 5e-05
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 50 5e-05
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 50 5e-05
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 50 5e-05
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 49 6e-05
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 49 6e-05
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 49 6e-05
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 49 6e-05
UniRef50_Q4P0P9 Cluster: Putative uncharacterized protein; n=1; ... 49 6e-05
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 49 6e-05
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 49 6e-05
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 49 6e-05
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 49 8e-05
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 49 8e-05
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 49 8e-05
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 49 8e-05
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 49 8e-05
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 49 8e-05
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 49 8e-05
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 49 8e-05
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 49 8e-05
UniRef50_A0CUN8 Cluster: Chromosome undetermined scaffold_28, wh... 49 8e-05
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 49 8e-05
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 49 8e-05
UniRef50_Q0U6X2 Cluster: ATP-dependent RNA helicase MAK5; n=2; P... 49 8e-05
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 49 8e-05
UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4; Mollic... 48 1e-04
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 48 1e-04
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 48 1e-04
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 48 1e-04
UniRef50_Q7R388 Cluster: GLP_111_80478_82724; n=1; Giardia lambl... 48 1e-04
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 48 1e-04
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 48 1e-04
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 48 1e-04
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 48 1e-04
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 48 1e-04
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 48 1e-04
UniRef50_Q4P9E5 Cluster: ATP-dependent rRNA helicase SPB4; n=2; ... 48 1e-04
UniRef50_Q8NHQ9 Cluster: ATP-dependent RNA helicase DDX55; n=86;... 48 1e-04
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 48 1e-04
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 48 1e-04
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 48 1e-04
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 48 1e-04
UniRef50_Q8A8L3 Cluster: ATP-independent RNA helicase; n=7; Bact... 48 1e-04
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 48 1e-04
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 48 1e-04
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 48 1e-04
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 48 1e-04
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 48 1e-04
UniRef50_Q8X0H1 Cluster: Related to RNA helicase MSS116; n=2; Ne... 48 1e-04
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 48 1e-04
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 48 1e-04
UniRef50_Q7RZH4 Cluster: ATP-dependent RNA helicase mak-5; n=1; ... 48 1e-04
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 48 1e-04
UniRef50_Q9VHU1 Cluster: Probable ATP-dependent RNA helicase DDX... 48 1e-04
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 48 1e-04
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 48 2e-04
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 48 2e-04
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 48 2e-04
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 48 2e-04
UniRef50_Q3LW03 Cluster: UB2 probably involved in pre-mRNA splic... 48 2e-04
UniRef50_Q5C221 Cluster: SJCHGC04124 protein; n=1; Schistosoma j... 48 2e-04
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 48 2e-04
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 48 2e-04
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 134 bits (325), Expect = 1e-30
Identities = 62/85 (72%), Positives = 75/85 (88%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+GRDVIAQ+QSGTG+TATFSIS+LQ +D +RE QALILAPTRELA QIQK ++ALGD++
Sbjct: 74 KGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYM 133
Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
N +CHACIGGTNV EDIR+L+ G H
Sbjct: 134 NVQCHACIGGTNVGEDIRKLDYGQH 158
Score = 63.7 bits (148), Expect = 3e-09
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = +3
Query: 141 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 257
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI IK
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIK 74
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 124 bits (299), Expect = 1e-27
Identities = 56/81 (69%), Positives = 72/81 (88%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+G DVIAQAQSGTG+TATF+ISILQ ++ +E QAL+LAPTRELAQQIQKV++ALGD++
Sbjct: 69 KGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYM 128
Query: 434 NAKCHACIGGTNVREDIRQLE 496
A CHACIGGTNVR ++++L+
Sbjct: 129 GATCHACIGGTNVRNEMQKLQ 149
Score = 99.5 bits (237), Expect = 4e-20
Identities = 45/68 (66%), Positives = 56/68 (82%), Gaps = 2/68 (2%)
Frame = +3
Query: 60 NGPSKDQG-SYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQ 233
+G S D + GP GMDP G ++++W+++V+ FDDMNLKE LLRGIYAYGFEKPSAIQQ
Sbjct: 2 SGGSADYNREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQ 61
Query: 234 RAIMPCIK 257
RAI+PCIK
Sbjct: 62 RAIIPCIK 69
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 101 bits (242), Expect = 1e-20
Identities = 44/57 (77%), Positives = 51/57 (89%), Gaps = 1/57 (1%)
Frame = +3
Query: 90 DGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 257
+GP GMDP G ++T+WD VV+ FDDMNLKE LLRG+YAYGFEKPSAIQQRAI+PCIK
Sbjct: 10 NGPEGMDPDGVIETNWDTVVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIK 66
Score = 81.0 bits (191), Expect = 2e-14
Identities = 41/52 (78%), Positives = 46/52 (88%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKV 409
+G DVIAQAQSGTG+TATF ISILQ IDTS++E QALILAPTRELAQQ K+
Sbjct: 66 KGHDVIAQAQSGTGKTATFVISILQRIDTSLKETQALILAPTRELAQQEWKL 117
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 96.3 bits (229), Expect = 4e-19
Identities = 44/64 (68%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Frame = +3
Query: 69 SKDQGSYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIM 245
SKD G GP GM+P G ++++W ++ + FDDMNLKE LLRGIYAYGFEKPSAIQQRAI+
Sbjct: 11 SKDHG---GPDGMEPDGIIESNWTEITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAII 67
Query: 246 PCIK 257
PCIK
Sbjct: 68 PCIK 71
Score = 72.1 bits (169), Expect = 8e-12
Identities = 35/48 (72%), Positives = 42/48 (87%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQ 397
+G DVIAQAQSGTG+TATF+ISILQ ++ +E QAL+LAPTRELAQQ
Sbjct: 71 KGYDVIAQAQSGTGKTATFAISILQQLEIDQKETQALVLAPTRELAQQ 118
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 95.1 bits (226), Expect = 9e-19
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
G+DV+AQAQSGTG+T TF+I LQ ID + R+ Q +ILAP RELA+QI VV +G +LN
Sbjct: 93 GKDVLAQAQSGTGKTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYLN 152
Query: 437 AKCHACIGGTNVREDIRQLEXGVH 508
+ CIGGT+ +E + + GVH
Sbjct: 153 IEAFCCIGGTSTQETREKCKQGVH 176
Score = 64.5 bits (150), Expect = 2e-09
Identities = 27/45 (60%), Positives = 37/45 (82%)
Frame = +3
Query: 120 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI 254
L +W + VETF+D+ L ++LLRGI++YGFE+PSAIQQ+AI P I
Sbjct: 47 LQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPII 91
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 91.5 bits (217), Expect = 1e-17
Identities = 43/65 (66%), Positives = 53/65 (81%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+G DVI QAQSGTG+TATF ILQ ++ + +CQAL+LAPTRELAQQI+KV+ ALGDHL
Sbjct: 48 KGLDVIQQAQSGTGKTATFCSGILQQLNEELTQCQALVLAPTRELAQQIEKVMRALGDHL 107
Query: 434 NAKCH 448
N K +
Sbjct: 108 NVKIY 112
Score = 32.3 bits (70), Expect = 7.5
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 159 DMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 257
D N+ L + G EKPSAIQQ+ I+P K
Sbjct: 16 DSNMNGLCLLNVLCEGIEKPSAIQQKGIVPFCK 48
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 89.0 bits (211), Expect = 6e-17
Identities = 39/65 (60%), Positives = 54/65 (83%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
QG DVIAQAQSGTG+T+ F++++ Q++DTS RE QALI +PTRELA Q +KV++A+GD +
Sbjct: 312 QGHDVIAQAQSGTGKTSMFALTVYQMVDTSNREVQALISSPTRELASQTEKVILAIGDSV 371
Query: 434 NAKCH 448
N + H
Sbjct: 372 NIQAH 376
Score = 61.7 bits (143), Expect = 1e-08
Identities = 25/44 (56%), Positives = 36/44 (81%)
Frame = +3
Query: 126 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 257
T+ +++ +FD M +K +LLRGIYAY FEKPSA+QQRA++P I+
Sbjct: 269 TEGVELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQ 312
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 85.8 bits (203), Expect = 6e-16
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
GRD++A+A++GTG+TA F I L+ + + + QALI+ PTRELA Q +VV LG H
Sbjct: 83 GRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCG 142
Query: 437 AKCHACIGGTNVREDIRQLEXGVH 508
C GGTN+R+DI +L VH
Sbjct: 143 ISCMVTTGGTNLRDDILRLNETVH 166
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +3
Query: 150 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
TF+D LK ELL GI+ GFEKPS IQ+ AI
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAI 77
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 81.8 bits (193), Expect = 9e-15
Identities = 42/85 (49%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 433
GRD++A+A++GTG+TA+F I L I+TS+ QALIL PTRELA Q +V LG H+
Sbjct: 73 GRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIP 132
Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
N + GGT +R+DI +L+ VH
Sbjct: 133 NLQVMITTGGTTLRDDILRLQQPVH 157
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/55 (45%), Positives = 31/55 (56%)
Frame = +3
Query: 78 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
QG P + P T D Q F+D L+ ELL GIY GFE+PS IQ++AI
Sbjct: 14 QGLAAPPKDLRPQTEDVTATQG-SRFEDFGLRRELLMGIYTAGFERPSPIQEQAI 67
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 81.4 bits (192), Expect = 1e-14
Identities = 40/87 (45%), Positives = 54/87 (62%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
AL QG+DVI QAQ+GTG+TA F + I++ + R QAL+L PTRELA Q+ + + +G
Sbjct: 39 ALLQGKDVIGQAQTGTGKTAAFGVPIVERLVPGQRAVQALVLTPTRELAIQVAEEITKIG 98
Query: 425 DHLNAKCHACIGGTNVREDIRQLEXGV 505
H K A GG ++ IR L GV
Sbjct: 99 RHARVKTIAIYGGQSIERQIRSLRFGV 125
Score = 33.5 bits (73), Expect = 3.3
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 150 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
TF D+ L E++L+ + GFE+PS IQ +AI
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAI 37
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 81.0 bits (191), Expect = 2e-14
Identities = 45/85 (52%), Positives = 57/85 (67%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+GRDVIAQ+QSGTG+TATFS+S+LQ +D Q L+ ALGD++
Sbjct: 74 KGRDVIAQSQSGTGKTATFSVSVLQCLDI-----QGLL----------------ALGDYM 112
Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
N +CHACIGGTNV EDIR+L+ G H
Sbjct: 113 NVQCHACIGGTNVGEDIRKLDYGQH 137
Score = 63.7 bits (148), Expect = 3e-09
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = +3
Query: 141 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 257
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI IK
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIK 74
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 79.4 bits (187), Expect = 5e-14
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 433
GRD++A+A++GTG++ + I +L+ ID QAL+L PTRELA Q+ ++ I + HL
Sbjct: 126 GRDILARAKNGTGKSGAYLIPMLERIDLKKDHIQALVLVPTRELALQVSQISIQIAKHLG 185
Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
K A GGTN+R+DI +L+ VH
Sbjct: 186 GVKVMATTGGTNLRDDIMRLDETVH 210
Score = 38.3 bits (85), Expect = 0.11
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 153 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
F+D LK ELL GI+ G+EKPS IQ+ +I
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESI 120
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 77.8 bits (183), Expect = 2e-13
Identities = 41/61 (67%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQ-IQKVVIALGDH 430
+G+D IAQAQSGTG+TATFSI+ LQ+IDTS QALILAPTRELAQQ I ++ LG +
Sbjct: 70 KGKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQALILAPTRELAQQTITRIFFILGVN 129
Query: 431 L 433
L
Sbjct: 130 L 130
Score = 37.5 bits (83), Expect = 0.20
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +2
Query: 401 QKVVIALGDHLNAKCHACIGGTNVREDIRQLEXGV 505
+KV++ LG+ L +AC GGT+ +ED ++L GV
Sbjct: 186 KKVIMYLGEFLKVSAYACTGGTDPKEDRKRLREGV 220
Score = 33.9 bits (74), Expect = 2.5
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 186 RGIYAYGFEKPSAIQQRAIMPCIK 257
+ + +YGFEKPS IQQ I+P IK
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIK 70
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 77.0 bits (181), Expect = 3e-13
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L +GRDV+ AQ+GTG+TA F++ IL ID +R QAL+L PTRELAQQ+ + + G
Sbjct: 43 LLEGRDVVGLAQTGTGKTAAFALPILANIDVKVRSPQALVLCPTRELAQQVAEAFRSYGR 102
Query: 428 HLNA-KCHACIGGTNVREDIRQLEXGVH 508
+ + + GG ++R+ ++ L G H
Sbjct: 103 GMGGLRILSIFGGADMRQQLKSLREGTH 130
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 77.0 bits (181), Expect = 3e-13
Identities = 35/86 (40%), Positives = 55/86 (63%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L QGRDV+ Q TG+T S+S+L + D S+++ Q LIL TR+L ++ +++ALG
Sbjct: 56 LIQGRDVVIQNFRSTGKTTVMSLSVLSIFDLSVKKIQVLILQKTRKLTEENAGLIMALGK 115
Query: 428 HLNAKCHACIGGTNVREDIRQLEXGV 505
LN HAC G ++++DI ++ GV
Sbjct: 116 FLNVSIHACSEGNSIQDDISVVQQGV 141
Score = 48.4 bits (110), Expect = 1e-04
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +3
Query: 141 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 257
+ TF+ M L++ELLRGI A+GF +P +QQRA++P I+
Sbjct: 20 IQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQ 58
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 75.8 bits (178), Expect = 6e-13
Identities = 38/82 (46%), Positives = 51/82 (62%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 439
RD++ QAQ+GTG+TA F I IL+ ID S R QALILAPTRELA Q+ + + ++
Sbjct: 41 RDIVGQAQTGTGKTAAFGIPILETIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKRL 100
Query: 440 KCHACIGGTNVREDIRQLEXGV 505
GG ++ IR+L GV
Sbjct: 101 NVFPVYGGQSIDRQIRELRRGV 122
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 74.9 bits (176), Expect = 1e-12
Identities = 33/85 (38%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 433
GRD++A+A++GTG++ + I +L+ +D QA+++ PTRELA Q+ ++ I + H+
Sbjct: 118 GRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMG 177
Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
AK A GGTN+R+D+ +L+ H
Sbjct: 178 GAKVMATTGGTNLRDDVMRLDDTGH 202
Score = 31.9 bits (69), Expect = 9.9
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 153 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
F+D LK ELL GI+ G+E PS+IQ+ +I
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESI 112
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 74.5 bits (175), Expect = 1e-12
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L +G+DV+ AQ+GTG+TA F++ +L +RE Q L+LAPTRELAQQ+ V +
Sbjct: 40 LLEGKDVLGLAQTGTGKTAAFTLPLLARTQNEVREPQVLVLAPTRELAQQVAMAVESYSK 99
Query: 428 H-LNAKCHACIGGTNVREDIRQLEXGVHW 511
H N K + GG++ R L+ G W
Sbjct: 100 HESNVKVASIYGGSDFGSQFRALKQGPQW 128
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 74.1 bits (174), Expect = 2e-12
Identities = 37/85 (43%), Positives = 53/85 (62%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+G+D+I QAQ+GTG+TA F+I IL +D SI Q L++APTRELA QI + LG +
Sbjct: 37 EGKDIIGQAQTGTGKTAAFAIPILSNLDCSINRIQHLVIAPTRELANQIYDQLNILGKYT 96
Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
+K +GG + + L GV+
Sbjct: 97 CSKIALILGGVSYEKQKAALNSGVN 121
Score = 35.5 bits (78), Expect = 0.81
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +3
Query: 153 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 248
F MN+K E+L+ + GFEKP+ IQ+ A++P
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQE-AVLP 33
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 74.1 bits (174), Expect = 2e-12
Identities = 33/85 (38%), Positives = 51/85 (60%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
QG+D+I QAQ+GTG+TA F + +L +DT Q +++APTRELA Q+ + + +G H
Sbjct: 38 QGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHK 97
Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
+ GG ++ IR L+ H
Sbjct: 98 RVRILPIYGGQDINRQIRALKKHPH 122
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 74.1 bits (174), Expect = 2e-12
Identities = 40/86 (46%), Positives = 51/86 (59%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L G D+I Q+ GT T T ILQ +D + ECQAL+L PT +LA + Q V+ LG
Sbjct: 82 LCNGLDIIQQSLFGT--TVTLCCGILQRLDYASTECQALVLVPTHDLAHETQNVIGVLGQ 139
Query: 428 HLNAKCHACIGGTNVREDIRQLEXGV 505
L+AK HA GGT+ ED + L GV
Sbjct: 140 FLSAKAHAFCGGTSAHEDQQILSTGV 165
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 73.3 bits (172), Expect = 3e-12
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L +GRDVI QAQ+GTG+TA F + +LQ ID + R QAL+L PTRELA Q+ + AL
Sbjct: 39 LLEGRDVIGQAQTGTGKTAAFGLPLLQRIDAADRSVQALVLCPTRELALQVANGLTALAK 98
Query: 428 HL-NAKCHACIGGTNVREDIRQLEXG 502
HL + + GG + L G
Sbjct: 99 HLRGVRILSVYGGQPIEPQASALRRG 124
Score = 37.1 bits (82), Expect = 0.26
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +3
Query: 144 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
VE+F D+ L+EELL+ I GF +PS IQ AI
Sbjct: 4 VESFKDLPLEEELLKAIEELGFTEPSPIQSIAI 36
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 73.3 bits (172), Expect = 3e-12
Identities = 41/85 (48%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +2
Query: 251 HQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDH 430
H G D I AQ+GTG+TA F + +L LID + RE QALILAPTRELAQQI + + H
Sbjct: 50 HDG-DFIGLAQTGTGKTAAFGLPLLDLIDVNSREVQALILAPTRELAQQICGQMEQMSKH 108
Query: 431 L-NAKCHACIGGTNVREDIRQLEXG 502
L GG N+ IR + G
Sbjct: 109 LGKLNVVPVFGGANIMNQIRDIRRG 133
Score = 32.3 bits (70), Expect = 7.5
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 144 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 257
++ F+ + L + LL G+ GFE P+ IQQ++I +K
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLK 49
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 72.9 bits (171), Expect = 4e-12
Identities = 35/87 (40%), Positives = 53/87 (60%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L GRDV+ Q+Q+GTG+TA FS+ IL+ +D + QA++L PTRELA Q+ +
Sbjct: 37 LLSGRDVVGQSQTGTGKTAAFSLPILERLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVG 96
Query: 428 HLNAKCHACIGGTNVREDIRQLEXGVH 508
+ + A GG ++ + QL+ GVH
Sbjct: 97 NSGLRTLAIYGGQSIDRQMLQLKRGVH 123
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 72.9 bits (171), Expect = 4e-12
Identities = 35/84 (41%), Positives = 53/84 (63%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
G DV+ +AQ+GTG+TA F+I +L+ ++ R QALI+ PTREL Q+ + + +G ++
Sbjct: 41 GMDVVGEAQTGTGKTAAFAIPVLENLEAE-RVPQALIICPTRELCLQVSEEIKRIGKYMK 99
Query: 437 AKCHACIGGTNVREDIRQLEXGVH 508
K A GG ++ I QL GVH
Sbjct: 100 VKVLAVYGGQSIGNQIAQLRRGVH 123
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 72.5 bits (170), Expect = 6e-12
Identities = 36/55 (65%), Positives = 45/55 (81%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIA 418
+G DVIAQ+QSGTG+TAT+ I+ LQ ID + QA+ILAPTRELA QIQKVV++
Sbjct: 57 KGFDVIAQSQSGTGKTATYVIAALQRIDMMKEDTQAIILAPTRELANQIQKVVLS 111
Score = 64.1 bits (149), Expect = 2e-09
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +3
Query: 144 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 257
V++F+ M L E LLRGI+AYGFEKPSAIQQ+AI+PCIK
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIK 57
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 72.5 bits (170), Expect = 6e-12
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
AL +GRDV+ QAQ+GTG+TA F++ +L +D RE Q L+LAPTRELAQQ+ + G
Sbjct: 42 ALLEGRDVLGQAQTGTGKTAAFALPLLSRLDLQRREPQVLVLAPTRELAQQVAASFVQYG 101
Query: 425 DHLNA-KCHACIGGTNVREDIRQLEXG 502
+ + + GG RE + L G
Sbjct: 102 RGVKGLEVLSLCGGQEYREQLSGLRRG 128
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 72.1 bits (169), Expect = 8e-12
Identities = 36/85 (42%), Positives = 54/85 (63%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
QG+D++ A++G+G+TA F+I ILQ + T+ + AL+LAPTRELA QI++ ALG +
Sbjct: 134 QGKDIVGIAETGSGKTAAFAIPILQTLYTAAQPYYALVLAPTRELAFQIKETFDALGSSM 193
Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
+ IGG ++ E R L H
Sbjct: 194 GLRSVCIIGGMSMMEQARDLMRKPH 218
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 71.3 bits (167), Expect = 1e-11
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L+ D++A A++GTG+TA F + +LQLID + QA+ILAPTREL QQI +I+ +
Sbjct: 38 LNDKEDIVALAKTGTGKTAAFGLPLLQLIDVNNDAIQAIILAPTRELGQQIAANLISFAE 97
Query: 428 HLNAKCHACI-GGTNVREDIRQLEXGVH 508
H + A + GG ++ I +L+ H
Sbjct: 98 HTSQVSIATLCGGIPIKPQIERLKEATH 125
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 70.9 bits (166), Expect = 2e-11
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG-DHL 433
G+DV+ +AQ+GTG+TA F + L IDTSI++ Q ++LAPTRELA Q+ + + + G D
Sbjct: 52 GKDVLGEAQTGTGKTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMK 111
Query: 434 NAKCHACIGGTNVREDIRQLEXG 502
+ GG + +QLE G
Sbjct: 112 GLRVATLYGGQSYGPQFQQLERG 134
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 70.9 bits (166), Expect = 2e-11
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L + RD++A AQ+GTG+TA F +LQ ID S + Q LI+APTREL QI +
Sbjct: 36 LAEDRDMVALAQTGTGKTAAFGFPLLQNIDASSKTTQGLIIAPTRELCLQITNEMKLYAK 95
Query: 428 HL-NAKCHACIGGTNVREDIRQLEXG 502
H+ + A GG+N++E R++ G
Sbjct: 96 HIKGVRVVAVYGGSNIQEQAREISRG 121
Score = 33.9 bits (74), Expect = 2.5
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 150 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
TFD + L LL+ I GFE PS IQ+ AI
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAI 32
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 70.5 bits (165), Expect = 2e-11
Identities = 32/87 (36%), Positives = 58/87 (66%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
+ QG++++ Q+Q+G+G+TATFSI L + + + + +I++PTRELA Q + + +LG
Sbjct: 54 ISQGKNIMFQSQNGSGKTATFSIGTLARLRLTSKTTELIIVSPTRELAIQTENTLKSLG- 112
Query: 428 HLNAKCHACIGGTNVREDIRQLEXGVH 508
A AC+GG ++ D++ L+ G+H
Sbjct: 113 ---ANTRACVGGNSLGADVKALQKGIH 136
Score = 39.9 bits (89), Expect = 0.038
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 138 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
+V T++ M LK EL+ I G+EKPS IQQRAI
Sbjct: 17 EVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAI 51
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 70.1 bits (164), Expect = 3e-11
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDT--SIRECQALILAPTRELAQQIQKVVIALGDH 430
G+DVI QA++GTG+TA FSI IL+ +D+ R+ QA+++ PTRELA Q+ L
Sbjct: 81 GKDVIGQARTGTGKTAAFSIPILEQLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARG 140
Query: 431 LNAKCHACIGGTNVREDIRQLEXG 502
+ + GG N+ +RQLE G
Sbjct: 141 VPTEIAVLSGGKNMNRQLRQLENG 164
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 69.7 bits (163), Expect = 4e-11
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIA-LGDHL 433
GRD++ QAQ+GTG+TA F++ +L+ +++ + Q L+LAPTRELA Q+ A H
Sbjct: 108 GRDLVGQAQTGTGKTAAFALPLLERLESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHP 167
Query: 434 NAKCHACIGGTNVREDIRQLEXGV 505
+ K A GGT+ R I L GV
Sbjct: 168 HLKVLAVYGGTDFRSQISTLRRGV 191
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 69.3 bits (162), Expect = 5e-11
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L +GRD + +AQ+GTG+TA FS+ +L ++ S + QA+++APTRELA Q+ + LG
Sbjct: 60 LLEGRDALGKAQTGTGKTAAFSLPLLNKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQ 119
Query: 428 HLNA-KCHACIGGTNVREDIRQLEXGVH 508
++ K GG ++ + +R L+ G H
Sbjct: 120 NIKGLKVLEIYGGASILDQMRALKSGAH 147
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 69.3 bits (162), Expect = 5e-11
Identities = 35/81 (43%), Positives = 53/81 (65%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
QG+D+IAQAQ+GTG+TA F+I IL ++ + ++ +ALI+ PTRELA QI + ++ LG
Sbjct: 81 QGKDLIAQAQTGTGKTAAFAIPILNTLNRN-KDIEALIITPTRELAMQISEEILKLGRFG 139
Query: 434 NAKCHACIGGTNVREDIRQLE 496
K GG +++ LE
Sbjct: 140 RIKTICMYGGQSIKRQCDLLE 160
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 69.3 bits (162), Expect = 5e-11
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L+ ++V+ AQ+GTG+TA F + +LQ I+ S+++ Q L+L PTREL QQ+ K +
Sbjct: 36 LNSTKNVVGVAQTGTGKTAAFGLPVLQQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSR 95
Query: 428 HL-NAKCHACIGGTNVREDIRQLEXGVH 508
++ A GG + E I++LE H
Sbjct: 96 YIVRIHTEAVYGGKKIEEQIKKLETPKH 123
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 69.3 bits (162), Expect = 5e-11
Identities = 34/85 (40%), Positives = 53/85 (62%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
+ G+DVI ++++GTG+TA F+I IL+ I R AL++ PTRELA Q+ + AL
Sbjct: 54 VRDGKDVIVRSKTGTGKTAAFAIPILERIADGRRRPSALVMCPTRELAIQVAQEFTALAK 113
Query: 428 HLNAKCHACIGGTNVREDIRQLEXG 502
H + A GG ++ E +++LE G
Sbjct: 114 HRDLSVVAVYGGASMGEQLQKLEAG 138
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 68.9 bits (161), Expect = 7e-11
Identities = 37/87 (42%), Positives = 51/87 (58%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
A+ G DVI QAQ+GTG+TA F I +++ + T R QALIL PTRELA Q+ + L
Sbjct: 39 AILAGGDVIGQAQTGTGKTAAFGIPVVEKVSTG-RHVQALILTPTRELAIQVSGEIQKLS 97
Query: 425 DHLNAKCHACIGGTNVREDIRQLEXGV 505
H + GG ++ I+ L+ GV
Sbjct: 98 KHKKIRTLPIYGGQSIVHQIKALKQGV 124
Score = 32.3 bits (70), Expect = 7.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 153 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
F+++ + EE+ + I GFE+PS IQ +AI
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAI 37
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 68.9 bits (161), Expect = 7e-11
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIR-ECQALILAPTRELAQQIQKVVIALGDHL 433
GRDVI AQ+GTG+TA F + ILQ + R +A+I+ PTRELA+QIQ V+ ALG +
Sbjct: 38 GRDVIGIAQTGTGKTAAFVLPILQRLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKYT 97
Query: 434 NAKCHACIGGTNVREDIRQLEXGV 505
+ GG + I++L GV
Sbjct: 98 GLRSVTLYGGVGYQGQIQRLRRGV 121
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 68.5 bits (160), Expect = 9e-11
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
G D+I +A+SGTG+TA F I L++ID I Q +ILAPTRE+A QI++V+ +LG +
Sbjct: 61 GFDLIVRAKSGTGKTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIK 120
Query: 437 A-KCHACIGGTNVREDIRQL 493
K + IGG + D ++L
Sbjct: 121 GLKVESFIGGVAMDIDRKKL 140
Score = 34.3 bits (75), Expect = 1.9
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 150 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
TF M L +++L G+ GF KPS IQ ++I
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSI 55
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 68.1 bits (159), Expect = 1e-10
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRE------CQALILAPTRELAQQIQKV 409
L QGRDV+A AQ+GTG+TA + + ++Q++ RE +ALILAPTRELAQQ+
Sbjct: 37 LLQGRDVLAAAQTGTGKTAAYGLPLIQMLSRQSREETAPKHPRALILAPTRELAQQVFDN 96
Query: 410 VIALGDHLNAKCHACIGGTNVREDIRQLEXGV 505
+ H GGT++R QL GV
Sbjct: 97 LKQYAQHTELAIVTVYGGTSIRVQQEQLAKGV 128
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 68.1 bits (159), Expect = 1e-10
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L G+D+ QAQ+GTG+TA F I ++ +D SI + Q+LIL PTRELA Q+ + L
Sbjct: 35 LMTGKDLTGQAQTGTGKTAAFGIPAIEHVDISINQTQSLILCPTRELALQVCTELKKLSK 94
Query: 428 HLNA-KCHACIGGTNVREDIRQLEXGVH 508
+ A GG ++ IR L+ G H
Sbjct: 95 FKKGLRVLAVYGGESIERQIRDLKAGAH 122
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 67.7 bits (158), Expect = 2e-10
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIREC--QALILAPTRELAQQIQKVVIALGD 427
+G D+I QAQ+GTG+TA F +I+ D S ++ +ALILAPTRELA Q+ + ++ LG
Sbjct: 40 EGHDIIGQAQTGTGKTAAFGCAIINNADFSGKKKSPKALILAPTRELAIQVNEELVRLGK 99
Query: 428 HLNAKCHACIGGTNVREDIRQLEXGV 505
H GG + IR L+ GV
Sbjct: 100 HEKLSVLPIYGGQPIDRQIRALKNGV 125
Score = 37.9 bits (84), Expect = 0.15
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +3
Query: 153 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
FDD+ LKE LL+ I GFE+PS IQ +I
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESI 35
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 67.7 bits (158), Expect = 2e-10
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRE--CQALILAPTRELAQQIQKVVIALGDH 430
G+D++A AQ+GTG+T F + +QL+ T R+ +ALIL PTRELA QI + ++ +
Sbjct: 39 GKDIVATAQTGTGKTLAFLLPTIQLLSTEPRQPGVRALILTPTRELALQINEALLQIARG 98
Query: 431 LNAKCHACIGGTNVREDIRQLEXGVH 508
+ +GG N R +R + G +
Sbjct: 99 TGIRAAVAVGGLNERSQLRDIRGGAN 124
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 67.3 bits (157), Expect = 2e-10
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
G D+I QA+SGTG+T FS L + Q LILAPTRE+A QI V+ A+G +
Sbjct: 100 GLDLIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKME 159
Query: 437 A-KCHACIGGTNVREDIRQLE 496
+CH IGGT + +D +L+
Sbjct: 160 GLECHVFIGGTPLSQDKTRLK 180
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 67.3 bits (157), Expect = 2e-10
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDH- 430
+ +DVI Q+ +G+G+T + + I Q IDTS RE QA+ILAPT ELA QI K + L +
Sbjct: 39 ENKDVIGQSPTGSGKTLAYLLPIFQKIDTSKREMQAIILAPTHELAMQINKEIQLLSGNS 98
Query: 431 -LNAKCHACIGGTNVREDIRQLEXGVH 508
++ IG NV+ I +L+ H
Sbjct: 99 KVSVTSTPIIGNANVKRQIEKLKEKPH 125
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 67.3 bits (157), Expect = 2e-10
Identities = 31/82 (37%), Positives = 50/82 (60%)
Frame = +2
Query: 263 DVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 442
D I A +GTG+TA F I +++ ID+++++ QAL+L+PTRELA Q+ + + LG +
Sbjct: 84 DFIGLASTGTGKTAAFGIPLIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVR 143
Query: 443 CHACIGGTNVREDIRQLEXGVH 508
GG + R I ++ G H
Sbjct: 144 VVTIYGGASYRTQIDGIKRGAH 165
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 67.3 bits (157), Expect = 2e-10
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
G D+I QA+SGTG+T FS L + Q LILAPTRE+A QI V+ A+G +
Sbjct: 99 GLDLIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKME 158
Query: 437 A-KCHACIGGTNVREDIRQLE 496
+CH IGGT + +D +L+
Sbjct: 159 GLECHVFIGGTPLSQDKTRLK 179
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 66.9 bits (156), Expect = 3e-10
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 439
+D+I QA+SGTG+T FS+ L+ ID + Q LILAPTRE+A QIQ + A+G +
Sbjct: 4 QDLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEMEG 63
Query: 440 -KCHACIGGTNVREDIRQLE 496
+ H IGGT D ++L+
Sbjct: 64 LRSHVFIGGTLFGPDRQKLK 83
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 66.9 bits (156), Expect = 3e-10
Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L + DV+A AQ+GTG+TA F + +LQ ID R Q+LIL PTREL QI +
Sbjct: 37 LGENNDVVALAQTGTGKTAAFGLPLLQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSK 96
Query: 428 HLNA-KCHACIGGTNVREDIRQLEXGVH 508
+++ K GG+++ IR L+ GVH
Sbjct: 97 YIDGLKVLPVYGGSSIDSQIRSLKRGVH 124
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 66.9 bits (156), Expect = 3e-10
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 433
G+D+I QA++G+G+TA FS+ IL I+ QALIL PTRELA Q+ + LG L
Sbjct: 84 GKDIIGQAKTGSGKTAAFSLPILNKINLDQPLLQALILCPTRELASQVVTEIRKLGRRLP 143
Query: 434 NAKCHACIGGTNVREDIRQLEXGV 505
K A GG + RE LE GV
Sbjct: 144 GLKVLAMTGGQSGREQADALENGV 167
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 66.9 bits (156), Expect = 3e-10
Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDH- 430
QGRD IA AQ+GTG+TA F++ ILQ + I QALILAPTRELA Q+ + L +
Sbjct: 42 QGRDAIALAQTGTGKTAAFALPILQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQ 101
Query: 431 LNAKCHACIGGTNVREDIRQLEXG 502
N GG ++QL G
Sbjct: 102 RNVTIAVLCGGQEYGRQLKQLRSG 125
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 66.9 bits (156), Expect = 3e-10
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIR----ECQALILAPTRELAQQIQKVVIAL 421
QG+D++A AQ+GTG+TA F + I++L+ + + +L+L PTRELA Q++ A
Sbjct: 60 QGKDIMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAY 119
Query: 422 GDHLNAKCHACIGGTNVREDIRQLEXGV 505
+L + A GG ++R +++L+ GV
Sbjct: 120 TKYLALRSDAVFGGVSIRPQVKRLQGGV 147
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 66.9 bits (156), Expect = 3e-10
Identities = 33/85 (38%), Positives = 50/85 (58%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
Q +DVI QAQ+GTG+TA F I I++ ++ QAL++APTRELA Q+ + + +G
Sbjct: 38 QNKDVIGQAQTGTGKTAAFGIPIVEKVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVK 97
Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
+ GG ++ IR L+ H
Sbjct: 98 RVRVLPIYGGQDIERQIRALKKHPH 122
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 66.5 bits (155), Expect = 4e-10
Identities = 34/85 (40%), Positives = 48/85 (56%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+G D++ A++GTG+T F+I ILQ + ALIL PTRELA QI + ALG +
Sbjct: 125 EGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPI 184
Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
KC +GG ++ R+L H
Sbjct: 185 TLKCSVIVGGRSLIHQARELSERPH 209
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 66.5 bits (155), Expect = 4e-10
Identities = 34/58 (58%), Positives = 40/58 (68%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
R VIAQAQSGTG+T FSI +L ID S + QAL+LAPTRELA QI V +G +
Sbjct: 131 RHVIAQAQSGTGKTGAFSIGVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRI 188
Score = 46.4 bits (105), Expect = 4e-04
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 84 SYDG-PPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
SY+ P D +W V+ FD M+L LL+G+Y+YGF PS IQ AI
Sbjct: 69 SYEAMTPAQDDPNFIPNWTTRVDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAI 122
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 66.5 bits (155), Expect = 4e-10
Identities = 32/79 (40%), Positives = 49/79 (62%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 439
+DVI QAQ+GTG+TA F I +++ I+ QA+++APTRELA Q+ + + +G A
Sbjct: 41 KDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRA 100
Query: 440 KCHACIGGTNVREDIRQLE 496
K GG ++ IR L+
Sbjct: 101 KVLPIYGGQDIGRQIRALK 119
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 66.5 bits (155), Expect = 4e-10
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
G D+I QA+SGTG+T F+ L + Q L+LAPTRE+A QI VV+A+G +
Sbjct: 63 GLDLIVQAKSGTGKTCVFTTIALDSLILENATTQVLVLAPTREIAVQIHAVVMAIGSAME 122
Query: 437 A-KCHACIGGTNVREDIRQLE 496
+CH IGG + +D + L+
Sbjct: 123 GLECHVFIGGRPISQDKQHLK 143
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 66.1 bits (154), Expect = 5e-10
Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQ-----ALILAPTRELAQQIQKVVIA 418
+G D++ AQ+GTG+TA FS+ ILQ + R+ + LIL PTRELA QI + + A
Sbjct: 40 EGHDLLGIAQTGTGKTAAFSLPILQNLSKHTRKIEPKSPRCLILTPTRELAIQIHENIEA 99
Query: 419 LGDHLNAKCHACIGGTNVREDIRQLEXGV 505
HLN K GG +R L+ GV
Sbjct: 100 YSKHLNMKHAVIFGGVGQNPQVRALQGGV 128
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 66.1 bits (154), Expect = 5e-10
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLI----DTSIRECQALILAPTRELAQQIQKVV 412
A+ +G+DV+A AQ+GTG+TA F++ +L+++ + + +AL+L PTRELA Q+ + V
Sbjct: 38 AILEGQDVMAAAQTGTGKTAGFTLPLLEILSKGENAQSNQVRALVLTPTRELAAQVAESV 97
Query: 413 IALGDHLNAKCHACIGGTNVREDIRQLEXG 502
G HL+ K GG + + L G
Sbjct: 98 KNYGQHLSLKSTVVFGGVKINPQMMALRRG 127
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 66.1 bits (154), Expect = 5e-10
Identities = 34/83 (40%), Positives = 49/83 (59%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 439
RDV+AQAQ+GTG+T F + IL+ ++ QALI+ PTRELA QI L +
Sbjct: 41 RDVMAQAQTGTGKTLAFILPILERVNVEKPTIQALIITPTRELAIQITAETKKLAEVKGI 100
Query: 440 KCHACIGGTNVREDIRQLEXGVH 508
A GG +V + +R+L+ +H
Sbjct: 101 NILAAYGGQDVEQQLRKLKGSIH 123
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 65.7 bits (153), Expect = 7e-10
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+G+D+I ++++GTG+TA F + +L+ I R +ALIL PTRELA Q+ + L H
Sbjct: 65 EGKDLIVRSKTGTGKTAAFGLPLLEKIPADERRVRALILCPTRELALQVADELKMLAKHK 124
Query: 434 NAKCHACIGGTNVREDIRQLEXG 502
K A GG ++++ LE G
Sbjct: 125 GLKIAAIYGGASMKQQEDALEEG 147
Score = 33.9 bits (74), Expect = 2.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 153 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 257
FDDMNL E + + G+ P+ +Q RA P I+
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIE 65
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 65.7 bits (153), Expect = 7e-10
Identities = 34/86 (39%), Positives = 50/86 (58%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L Q D+I QAQ+GTG+TA F + I+Q I+ +++ QALIL PTRELA Q+ + + +
Sbjct: 37 LSQDHDIIGQAQTGTGKTAAFGLPIVQKIEPGLKKPQALILCPTRELAIQVNEEIKSFCK 96
Query: 428 HLNAKCHACIGGTNVREDIRQLEXGV 505
GG + + R L+ GV
Sbjct: 97 GRGITTVTLYGGAPIMDQKRALKKGV 122
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 65.7 bits (153), Expect = 7e-10
Identities = 34/85 (40%), Positives = 49/85 (57%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+G D+I AQ+G+G+TA F+I IL + A ILAPTRELAQQI++ +LG +
Sbjct: 117 EGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLM 176
Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
+ +GG N+ + R L H
Sbjct: 177 GVRSTCIVGGMNMMDQARDLMRKPH 201
Score = 36.3 bits (80), Expect = 0.46
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 123 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 257
+T+ D+ E+F ++NL EL++ + KP+ IQ +AI P ++
Sbjct: 73 NTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALE 117
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 65.7 bits (153), Expect = 7e-10
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L GRDV+ AQ+G+G+TA FS+ +LQ +D ++ Q L+LAPTRELA Q+ + +
Sbjct: 40 LLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSK 99
Query: 428 HL-NAKCHACIGGTNVREDIRQLEXG 502
H+ A GG +R L G
Sbjct: 100 HMRGVNVVALYGGQRYDVQLRALRQG 125
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 65.3 bits (152), Expect = 9e-10
Identities = 32/79 (40%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
G D+I +++SGTG+T FS L+ ++T+ Q LIL PTRE+A QI+ V+ ++G H+N
Sbjct: 61 GFDLIVKSKSGTGKTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVN 120
Query: 437 A-KCHACIGGTNVREDIRQ 490
K + IGG + +D+++
Sbjct: 121 GLKIESFIGGRPLEDDLKK 139
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 65.3 bits (152), Expect = 9e-10
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQI-QKVVIALGDHL 433
G+D+I QA++GTG+T F + IL+ ID + QALI+APTRELA QI ++ L
Sbjct: 42 GKDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQRE 101
Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
+ A GG +V + +R+L+ H
Sbjct: 102 DINVLAIYGGQDVAQQLRKLKGNTH 126
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 65.3 bits (152), Expect = 9e-10
Identities = 33/84 (39%), Positives = 49/84 (58%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+G +++ QA +GTG+TA + + +LQ I ++ Q LI+ PTRELA Q+ V LG +L
Sbjct: 38 EGHNLVGQAPTGTGKTAAYLLPVLQRIQRG-KKAQVLIVTPTRELALQVADEVAKLGKYL 96
Query: 434 NAKCHACIGGTNVREDIRQLEXGV 505
+ A GG + IR L GV
Sbjct: 97 KVRALAVYGGQAIERQIRGLRQGV 120
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 65.3 bits (152), Expect = 9e-10
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQI--QKVVIALGD 427
Q +D++ +Q+GTG+T + + I + IDTS RE QALILAPT EL QI Q ++A
Sbjct: 38 QNKDLLINSQTGTGKTLAYLLPIFEKIDTSKRETQALILAPTHELVMQITNQVELLAKNA 97
Query: 428 HLNAKCHACIGGTNVREDIRQLE 496
L+ A IG N+++ I+ ++
Sbjct: 98 ELSVTSLALIGEVNIQKQIKNIK 120
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 65.3 bits (152), Expect = 9e-10
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSI---RECQALILAPTRELAQQIQKVVIALGD 427
GRDV+ AQ+GTG+T F+ ILQ + I R ++LIL PTRELA QIQ+ A G
Sbjct: 38 GRDVLGCAQTGTGKTCAFAAPILQRLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGK 97
Query: 428 HLNAKCHACIGGTNVREDIRQLEXGV 505
HL + GG + + +L+ GV
Sbjct: 98 HLPLRSAVIFGGVGQQPQVDKLKKGV 123
Score = 36.7 bits (81), Expect = 0.35
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +3
Query: 150 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI 254
TF ++ L + +L+ + G+EKPS IQ++AI P +
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPAL 36
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 65.3 bits (152), Expect = 9e-10
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDH- 430
+ +D+I Q+Q+G+G+T + + I Q ID+S RE QALILAPT EL QI K + L +
Sbjct: 39 KNKDIIGQSQTGSGKTLAYLLPIFQKIDSSKRETQALILAPTHELVMQIDKQIKTLSSNA 98
Query: 431 -LNAKCHACIGGTNVREDIRQLEXGVH 508
L IG N+ I +L+ H
Sbjct: 99 GLTINSTVMIGEVNIVRQIEKLKEKPH 125
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 65.3 bits (152), Expect = 9e-10
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQ--LIDTSIRECQ---ALILAPTRELAQQIQKVVIAL 421
GRD++ A++G+G+TA F+I +LQ L+ IR AL+LAPTRELAQQI+K V A
Sbjct: 155 GRDLLGCAETGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAF 214
Query: 422 GDHLNA-KCHACIGGTNVREDIRQLEXGV 505
L + K +GGTN+ + +L GV
Sbjct: 215 SRSLESLKNCIVVGGTNIEKQRSELRAGV 243
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 64.9 bits (151), Expect = 1e-09
Identities = 31/82 (37%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+G+++ ++ +GTG+TA+F + IL+ I+ + R QA+I+APTRELA QI + G +
Sbjct: 37 EGKNIFGKSSTGTGKTASFVLPILEKIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRI 96
Query: 434 -NAKCHACIGGTNVREDIRQLE 496
N IGG ++R+ I++L+
Sbjct: 97 ENLVIAPLIGGADMRDQIKRLK 118
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 64.9 bits (151), Expect = 1e-09
Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQ-ALILAPTRELAQQIQKVVIALGDH 430
QGRD + QA++GTG+TA F + IL S++E + ALILAPTRELA QI+ +
Sbjct: 8 QGRDCLIQAKTGTGKTAAFGLPILN----SLKEGEKALILAPTRELALQIRDNFRDFARY 63
Query: 431 LNAKCHACIGGTNVREDIRQLEXG 502
LN + A GGT V D++ L G
Sbjct: 64 LNVRTFAFYGGTKVFGDLKVLRGG 87
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 64.9 bits (151), Expect = 1e-09
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIR----ECQALILAPTRELAQQIQKVV 412
A+ G+DV+A AQ+GTG+TA F++ +L+L+ + + +AL+L PTRELA Q+ + V
Sbjct: 34 AVLTGKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIRALVLTPTRELAAQVSESV 93
Query: 413 IALGDHLNAKCHACIGGTNVREDIRQLEXGV 505
G +L + GG + I++L GV
Sbjct: 94 ETYGKYLPLRSAVVFGGVPINPQIQKLRHGV 124
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 64.9 bits (151), Expect = 1e-09
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIR----ECQALILAPTRELAQQIQKVV 412
A+ G+DV+A AQ+GTG+TA F++ +L+L+ + + +AL+L PTRELA Q+ + V
Sbjct: 34 AVLTGKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIRALVLTPTRELAAQVSESV 93
Query: 413 IALGDHLNAKCHACIGGTNVREDIRQLEXGV 505
G +L + GG + I++L GV
Sbjct: 94 ETYGKYLPLRSAVVFGGVPINPQIQKLRHGV 124
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 64.9 bits (151), Expect = 1e-09
Identities = 32/70 (45%), Positives = 45/70 (64%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
QGRD+IA A++G+G+TA F + ILQ + + ALILAPTREL QI + ++A+G L
Sbjct: 87 QGRDIIALAETGSGKTAAFGLPILQRLLQRTQRFYALILAPTRELCLQISQQILAMGGTL 146
Query: 434 NAKCHACIGG 463
+GG
Sbjct: 147 GVTVVTLVGG 156
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+G DVIAQA +G+G+TA F + +LQ +D ++ QAL+L PTRELA Q+ K + L +
Sbjct: 62 RGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVLCPTRELADQVGKQLRKLATGI 121
Query: 434 -NAKCHACIGGTNVREDIRQLE 496
N K GG + + LE
Sbjct: 122 PNMKLVVLTGGMPLGPQLASLE 143
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/87 (32%), Positives = 56/87 (64%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L +G++++ ++++G+G+TA+F+I + + I+ QALI+ PTRELA Q++ + +G
Sbjct: 37 LLKGQNLVVRSKTGSGKTASFAIPLCENINVDYNNIQALIVVPTRELALQVKDEISDIGR 96
Query: 428 HLNAKCHACIGGTNVREDIRQLEXGVH 508
+C A G ++++ I +L+ VH
Sbjct: 97 LKKVRCSAIFGKQSIKDQIAELKQRVH 123
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 64.5 bits (150), Expect = 2e-09
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRE-CQALILAPTRELAQQIQKVVIAL 421
AL +D+IAQAQ+GTG+TA F I +L+ ID + +A+I+ PTRELA QI + + +L
Sbjct: 52 ALSTDKDLIAQAQTGTGKTAAFGIPLLERIDFKANKFVKAIIVTPTRELALQIFEELKSL 111
Query: 422 GDHLNAKCHACIGGTNVREDIRQLEXGV 505
K GG ++ + + LE GV
Sbjct: 112 KGTKRVKITTLYGGQSLEKQFKDLEKGV 139
Score = 33.5 bits (73), Expect = 3.3
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 147 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 248
E F+D L EE+L I G+EKP+ I Q+ ++P
Sbjct: 18 ERFEDFGLSEEILLAIQKKGYEKPTEI-QKIVLP 50
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQ-LIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
G DVI AQ+GTG+TA +++ I+Q ++ T + L++APTRELA QI +LG
Sbjct: 38 GHDVIGLAQTGTGKTAAYALPIIQKMLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRA 97
Query: 434 NAKCHACIGGTNVREDIRQLEXGV 505
+ + GG N+ + IR+L GV
Sbjct: 98 RIRECSIYGGVNMDQQIRRLRSGV 121
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 64.1 bits (149), Expect = 2e-09
Identities = 35/85 (41%), Positives = 48/85 (56%)
Frame = +2
Query: 242 NALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIAL 421
NA+H G+DV+ QA++GTG+TA F +S+L + + L+L TRELA QI+ L
Sbjct: 71 NAIH-GKDVLCQAKAGTGKTAVFVLSVLNQLPDDAKPFSCLVLCHTRELAFQIKNEFKRL 129
Query: 422 GDHLNAKCHACIGGTNVREDIRQLE 496
G N K A GG DI L+
Sbjct: 130 GKFTNFKVKAVYGGVEESVDIHTLK 154
Score = 37.9 bits (84), Expect = 0.15
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +3
Query: 150 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI--KDAMLSLK 278
+F+D +LK++LLR + GFE+PS +Q + I I KD + K
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAK 83
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 64.1 bits (149), Expect = 2e-09
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLI-----DTSIRECQALILAPTRELAQQIQKVVIA 418
+G D+ A AQ+GTG+TA FS+ ++Q + S + +ALI APTRELA+QI + A
Sbjct: 37 RGHDIFATAQTGTGKTAAFSLPLIQQLLESGKSASRKTARALIFAPTRELAEQIADNIKA 96
Query: 419 LGDHLNAKCHACIGGTNVREDIRQLEXGV 505
+ N A GG + R LE GV
Sbjct: 97 YTKYTNLSVAAIFGGRKMSSQERMLENGV 125
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 64.1 bits (149), Expect = 2e-09
Identities = 30/62 (48%), Positives = 44/62 (70%)
Frame = +2
Query: 251 HQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDH 430
+Q +++IAQ+QSGTG+TATF +++L ID + CQ L +APTREL QI +V I +
Sbjct: 85 NQPKNLIAQSQSGTGKTATFLLTMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSKF 144
Query: 431 LN 436
+N
Sbjct: 145 MN 146
Score = 45.6 bits (103), Expect = 8e-04
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +3
Query: 144 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
V++F+D+ LK ELL GI + GF KPS+IQ+RA+
Sbjct: 47 VKSFEDLQLKSELLNGISSMGFRKPSSIQERAL 79
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 63.7 bits (148), Expect = 3e-09
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIREC--QALILAPTRELAQQIQKVVIALGD 427
+G+D++A AQ+GTG+TA F + I+Q + R ALIL PTRELAQQ+ + +
Sbjct: 43 EGKDLLAAAQTGTGKTAAFGLPIIQAVQQKKRNGTPHALILVPTRELAQQVFDNLTQYAE 102
Query: 428 HLNAKCHACIGGTNVREDIRQLEXG 502
H + + GGT++ +LE G
Sbjct: 103 HTDLRIVCVYGGTSIGVQKNKLEEG 127
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 63.7 bits (148), Expect = 3e-09
Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQ-LIDTSI----RECQALILAPTRELAQQIQKV 409
A+ +D++ AQ+GTG+TA F++ ++Q L+ I R +A+IL+PTRELA QI +
Sbjct: 136 AVLNSKDLVGLAQTGTGKTAAFALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEA 195
Query: 410 VIALGDHLNAKCHACIGGTNVREDIRQLEXGV 505
++ G L IGG +R+ +R L GV
Sbjct: 196 FVSFGKRLPLNFTHAIGGAPIRKQMRDLSKGV 227
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 63.7 bits (148), Expect = 3e-09
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRE--CQALILAPTRELAQQIQKVVIALGDH 430
GRDV+ QAQ+GTG+TA F++ ++ +D + R+ Q L+LAPTRELA Q+ + A +
Sbjct: 44 GRDVLGQAQTGTGKTAAFALPLINNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKN 103
Query: 431 LNAKCHACI-GGTNVREDIRQLEXGV 505
+ ACI GG IR L+ GV
Sbjct: 104 VPNLDVACIYGGQEYGSQIRALKQGV 129
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 63.7 bits (148), Expect = 3e-09
Identities = 31/81 (38%), Positives = 47/81 (58%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+G+D+IA++ +GTG+T + I IL ID + QA+ILAP+ ELA QI + +
Sbjct: 46 EGKDLIAESPTGTGKTLAYLIPILHRIDPESKAVQAVILAPSHELAMQIHQTIEKWTKDN 105
Query: 434 NAKCHACIGGTNVREDIRQLE 496
N IGG N++ I L+
Sbjct: 106 NISSEPLIGGANIKRQIENLK 126
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 63.7 bits (148), Expect = 3e-09
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
Q RDVI AQ+G+G+TA F+I ILQ + + + A +LAPTRELA QI + V ALG +
Sbjct: 140 QARDVIGLAQTGSGKTAAFTIPILQALWDNPKPFFACVLAPTRELAYQISQQVEALGSTI 199
Query: 434 NAKCHACIGGTNV 472
+ +GG ++
Sbjct: 200 GVRSATIVGGMDM 212
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 63.3 bits (147), Expect = 4e-09
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 433
G D+I +A+SGTG+T F I L++ID I Q LILAPTRE+A QI +V ++G +
Sbjct: 33 GFDLIMRAKSGTGKTLVFCIISLEMIDIDISSVQVLILAPTREIAVQIAQVFSSVGCEIK 92
Query: 434 NAKCHACIGGTNVREDIRQL 493
+ K IGG + D +++
Sbjct: 93 DLKVEVFIGGLAIENDKKKV 112
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 63.3 bits (147), Expect = 4e-09
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLI-----DTSIRECQALILAPTRELAQQIQKVVIAL 421
G+DV+A AQ+GTG+TA F++ +LQ + S + L+L PTRELA+Q+ + IA
Sbjct: 38 GKDVMAGAQTGTGKTAGFALPLLQRLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAY 97
Query: 422 GDHLNAKCHACIGGTNVREDIRQLEXGV 505
G L+ + A GG ++ + +L GV
Sbjct: 98 GKGLDLRFLAAYGGVSINPQMMKLRKGV 125
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 63.3 bits (147), Expect = 4e-09
Identities = 32/70 (45%), Positives = 45/70 (64%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+GRD+IA A++G+G+TA+F+I IL + A+IL PTRELA QI + A+G +
Sbjct: 40 KGRDIIASAKTGSGKTASFAIPILNQLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPM 99
Query: 434 NAKCHACIGG 463
N C IGG
Sbjct: 100 NVNCSVVIGG 109
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 63.3 bits (147), Expect = 4e-09
Identities = 30/85 (35%), Positives = 51/85 (60%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+G+D+I QA++GTG+TA F I +++ I + + Q L++ PTRELA Q+ + + +G
Sbjct: 38 EGKDLIGQARTGTGKTAAFGIPMVEAIRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVR 97
Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
+ A GG + R ++ LE H
Sbjct: 98 GIRSVAIYGGQDFRSQVKALEELPH 122
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 63.3 bits (147), Expect = 4e-09
Identities = 28/84 (33%), Positives = 55/84 (65%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
G++++ ++++GTG+TA++ + +L +I++S Q +IL P RELA QI + V + +
Sbjct: 145 GKNLLVRSKNGTGKTASYIVPMLNMINSSELSIQGIILVPIRELALQISRNVKRMSEGTG 204
Query: 437 AKCHACIGGTNVREDIRQLEXGVH 508
+GGT++++DI ++ GVH
Sbjct: 205 VISAPVVGGTSMQDDIIRVSNGVH 228
>UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28;
Alphaproteobacteria|Rep: Cold-shock dead-box protein A -
Bradyrhizobium japonicum
Length = 650
Score = 62.9 bits (146), Expect = 5e-09
Identities = 31/90 (34%), Positives = 55/90 (61%), Gaps = 6/90 (6%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQ------ALILAPTRELAQQIQKVVIA 418
GRD++ AQ+G+G+T + +++ + + I + ALI+APTRELA Q+Q+ +
Sbjct: 36 GRDLLVSAQTGSGKTLAYGLALAKDLLDGIERFERAGAPLALIVAPTRELALQVQRELAW 95
Query: 419 LGDHLNAKCHACIGGTNVREDIRQLEXGVH 508
L +H + + +C+GG + R + R+L G H
Sbjct: 96 LYEHADGRVVSCVGGMDPRREQRELAAGAH 125
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 62.9 bits (146), Expect = 5e-09
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLI----DTSIRECQ----ALILAPTRELAQQIQKVV 412
G+DV+A AQ+GTG+TA F++ +L + +TS+ + ALI+APTRELA QI + V
Sbjct: 42 GKDVMASAQTGTGKTAGFTLPLLYRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESV 101
Query: 413 IALGDHLNAKCHACIGGTNVREDIRQLEXGV 505
G +L + GG N+ I L+ GV
Sbjct: 102 RKYGKYLALRTAVVFGGINIEPQIAALQAGV 132
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 62.9 bits (146), Expect = 5e-09
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
A+ G+D+IAQA++GTG+TA F + +L + Q LIL PTREL +Q+ K + L
Sbjct: 37 AILDGKDLIAQAKTGTGKTAAFGLGVLSKLVLDDYRIQVLILCPTRELCEQVSKAIRDLA 96
Query: 425 DHL-NAKCHACIGGTNVREDIRQLEXGVH 508
+ N K + GG R ++ + G H
Sbjct: 97 RMMPNIKLLSLGGGMPFRPQMKSVAHGAH 125
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 62.9 bits (146), Expect = 5e-09
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLID--TSIRECQALILAPTRELAQQIQKVVIALGD 427
+GRDV+ QA++GTG+TA F I I++ ++ + R QALIL PTRELA Q++ + L
Sbjct: 40 EGRDVLGQARTGTGKTAAFGIPIIERLEHGPNSRNPQALILTPTRELAVQVRDEIAKLTH 99
Query: 428 HLNAKCHACIGGTNVREDIRQLEXGVH 508
A GG +R + +L+ H
Sbjct: 100 GQRINVVAVYGGKPLRSQMEKLKRAPH 126
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 62.9 bits (146), Expect = 5e-09
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDT------SIRECQALILAPTRELAQQIQK 406
A+ +GRD++A AQ+GTG+TA F++ +LQ + T R +ALIL PTRELA QI +
Sbjct: 34 AVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGE 93
Query: 407 VVIALGDHLNAKCHACIGGTNVREDIRQLEXGV 505
V +LN + GG ++ + +L GV
Sbjct: 94 NVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGV 126
Score = 32.3 bits (70), Expect = 7.5
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 150 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
+FD + L ++LR + G+ +P+ IQQ+AI
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAI 32
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 62.5 bits (145), Expect = 6e-09
Identities = 33/82 (40%), Positives = 46/82 (56%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
G D+I QAQ+GTG+TA F + +L ID S + QAL+LAPTRELAQQ+ +
Sbjct: 92 GSDLIGQAQTGTGKTAAFGLPLLNNIDFSKKCVQALVLAPTRELAQQVGDALATYSGDDG 151
Query: 437 AKCHACIGGTNVREDIRQLEXG 502
GG++ + + L G
Sbjct: 152 RNVLVVYGGSSYQAQVGGLRRG 173
Score = 33.5 bits (73), Expect = 3.3
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 150 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
+F D NLK +L+ + GF +P+ IQ++AI
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAI 86
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 62.5 bits (145), Expect = 6e-09
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +2
Query: 263 DVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD-HLNA 439
++I Q+Q+GTG++ F + ++QLID+ I+E QA+++APTRELAQQ+ L
Sbjct: 43 NLIGQSQTGTGKSHAFLLPLMQLIDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGV 102
Query: 440 KCHACIGGTNVRED 481
IGGT++ +D
Sbjct: 103 SVKVFIGGTDIEKD 116
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 62.5 bits (145), Expect = 6e-09
Identities = 34/87 (39%), Positives = 48/87 (55%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L +GRD+I Q+ SGTG+T + I + SI Q LIL PTREL+ QI+ V L
Sbjct: 44 LLKGRDIIYQSPSGTGKTTCYIIGTSNQLCQSINSPQCLILVPTRELSIQIRNVFNVLNI 103
Query: 428 HLNAKCHACIGGTNVREDIRQLEXGVH 508
+ +C GG + ED++ L+ H
Sbjct: 104 YTKNSITSCHGGRWLGEDLKNLKKNFH 130
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 62.1 bits (144), Expect = 8e-09
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRE-CQALILAPTRELAQQIQKVVIAL 421
A+ +G D+IA A++G+G+TA + + I+ ++T E ++LI+ PTRELA Q KV L
Sbjct: 46 AILRGNDIIAMARTGSGKTAAYLVPIINRLETHSTEGVRSLIICPTRELALQTIKVFNEL 105
Query: 422 GDHLNAKCHACIGGTNVREDIRQLEXG 502
G N K IGG+ + + L G
Sbjct: 106 GKLTNLKASLIIGGSKLSDQFDNLSSG 132
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 62.1 bits (144), Expect = 8e-09
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
AL +G+DV+ +AQ+GTG+TA F + L ID S+++ Q L++ PTRELA Q+ + +
Sbjct: 41 ALLEGQDVLGEAQTGTGKTAAFGLPALAKIDASVKQTQVLVVTPTRELAIQVAEALEGFA 100
Query: 425 DHLNAKCHACI-GGTNVREDIRQLEXG 502
+ A + GG ++ L+ G
Sbjct: 101 AKMRGVGVATVYGGAPFGPQVKALKQG 127
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 62.1 bits (144), Expect = 8e-09
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 433
G D++ +AQ+GTG+TA F++ +L +D +++ Q L+LAPTRELA Q+ + +L
Sbjct: 81 GHDLLGEAQTGTGKTAAFALPLLDRLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLP 140
Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
GG ++ +RQL G H
Sbjct: 141 GFHVLPVYGGQSMVVQLRQLARGAH 165
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 62.1 bits (144), Expect = 8e-09
Identities = 29/80 (36%), Positives = 48/80 (60%)
Frame = +2
Query: 263 DVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 442
++IA+A++GTG+TA F + ++Q + + AL+L PTRELA Q+ + +L +
Sbjct: 86 NIIAKARTGTGKTAAFGLPLIQELGSPCEHPGALVLVPTRELAAQVASELSSLRIQKIPR 145
Query: 443 CHACIGGTNVREDIRQLEXG 502
H GG ++ E +R LE G
Sbjct: 146 IHTVYGGVSIAEQLRNLEQG 165
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 62.1 bits (144), Expect = 8e-09
Identities = 30/84 (35%), Positives = 52/84 (61%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
G+DVIA++ +GTG+T +++ +L+ I + QA+ILAP+REL QI +V+
Sbjct: 41 GKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSRELVMQIFQVIQDWKAGSE 100
Query: 437 AKCHACIGGTNVREDIRQLEXGVH 508
+ + IGG NV++ + +L+ H
Sbjct: 101 LRAASLIGGANVKKQVEKLKKHPH 124
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 62.1 bits (144), Expect = 8e-09
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Frame = +2
Query: 263 DVIAQAQSGTGQTATFSISILQLI----DTSIRECQALILAPTRELAQQIQKVVIALGDH 430
D++A AQ+GTG+TA F++ +LQ + T ++ ++LI+ PTRELA Q+ V
Sbjct: 40 DLLAVAQTGTGKTAAFTLPLLQRLAAKQSTKVQGVRSLIVTPTRELAAQVAISVEIYSTQ 99
Query: 431 LNAKCHACIGGTNVREDIRQLEXGV 505
LN + A GG + I QL+ GV
Sbjct: 100 LNIRSFAVYGGVRIEPQIAQLQEGV 124
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 62.1 bits (144), Expect = 8e-09
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQL-----IDTSIRECQALILAPTRELAQQIQKV 409
A+ +G DV+A AQ+GTG+TA F++ ILQ + +ALIL PTRELA Q+
Sbjct: 34 AIRRGEDVLASAQTGTGKTAAFALPILQKMHERPMTVQHSNARALILTPTRELAAQVADN 93
Query: 410 VIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
+ A H+N GG + ++L+ G
Sbjct: 94 ISAYSKHMNISVLTIYGGMKMATQAQKLKQG 124
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 62.1 bits (144), Expect = 8e-09
Identities = 29/69 (42%), Positives = 47/69 (68%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 439
R++I Q+QSGTG+TA F++++L +D +I QA+ +AP+RELA+QIQ+V+ +G
Sbjct: 188 RNLIGQSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQV 247
Query: 440 KCHACIGGT 466
I G+
Sbjct: 248 GTFLAIPGS 256
Score = 44.0 bits (99), Expect = 0.002
Identities = 17/33 (51%), Positives = 28/33 (84%)
Frame = +3
Query: 144 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
V++F ++NL E+L++GI A GF+KPS IQ++A+
Sbjct: 147 VQSFKELNLHEDLMKGIIAAGFQKPSKIQEKAL 179
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 61.7 bits (143), Expect = 1e-08
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L++ D++ AQ+GTG+TA F I ++QL DT ++ QAL+L PTREL Q+ + +G
Sbjct: 37 LNRQTDLVGLAQTGTGKTAAFGIPLIQLTDTRLKRTQALVLCPTRELCVQVAGDLNLMGR 96
Query: 428 HL-NAKCHACIGGTNVREDIRQLEXG 502
++ K GG ++ +L G
Sbjct: 97 YVQKLKIVPVYGGASIVSQTEELRKG 122
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 61.7 bits (143), Expect = 1e-08
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTS----IRECQALILAPTRELAQQIQKVVIAL 421
+G D++A+AQ+GTG+TA+F++ I++ + + R +AL+LAPTRELA Q+ +
Sbjct: 40 RGDDLLAEAQTGTGKTASFALPIIEKLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEY 99
Query: 422 GDHLNAKCHACIGGTNVREDIRQLEXG 502
G L + + GG V I++L+ G
Sbjct: 100 GRDLGMRVISVYGGVPVENQIKRLKRG 126
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 61.7 bits (143), Expect = 1e-08
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
QG DVI QA++G+G+TA F + IL+ S + QAL+LAPTRELA Q+ + L +
Sbjct: 41 QGTDVIGQARTGSGKTAAFGLPILERCQPS-GKLQALVLAPTRELANQVAQEFELLQGNA 99
Query: 434 NAKCHACIGGTNVREDIRQLEXGV 505
GGT++ + + L GV
Sbjct: 100 GLSIVTVYGGTDLEKQAKTLAKGV 123
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 61.7 bits (143), Expect = 1e-08
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLI------DTSIRECQALILAPTRELAQQIQKVVIA 418
GRD+I +AQ+GTG+TA F I++LQ + + E +ALILAPTRELA QI K
Sbjct: 135 GRDIIGKAQTGTGKTAAFLITVLQKLLTVKPEERFASEPRALILAPTRELAMQIAKDADG 194
Query: 419 LGDHLNAKCHACIGGTNVREDIRQLEXGV 505
L + + +GG + + QLE V
Sbjct: 195 LSKYADLNIVTVLGGVDYDKQKEQLENEV 223
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 61.7 bits (143), Expect = 1e-08
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISIL-QLID--TSIRECQALILAPTRELAQQIQKVVIALGD 427
GRD++ QA +GTG+TA F++ +L +L D T QAL+L PTRELA Q+ + + G
Sbjct: 94 GRDLLGQAATGTGKTAAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGR 153
Query: 428 HLNAKCHACIGGTNVREDIRQLEXGV 505
L A+ GG + +R L GV
Sbjct: 154 DLGARVLPVYGGAPIGRQVRALVQGV 179
Score = 37.5 bits (83), Expect = 0.20
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 123 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI 254
D D + V F ++ L+ ELLR + A G+E+P+ IQ+ A+ P +
Sbjct: 49 DIDPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLV 92
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 61.7 bits (143), Expect = 1e-08
Identities = 31/81 (38%), Positives = 47/81 (58%)
Frame = +2
Query: 263 DVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 442
+VI QAQ+GTG+TA F I +++ +D + QAL+L PTRELA Q+ + +L +
Sbjct: 42 NVIGQAQTGTGKTAAFGIPLIERLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLN 101
Query: 443 CHACIGGTNVREDIRQLEXGV 505
GG ++ IR L+ V
Sbjct: 102 LLPVYGGVSIGNQIRALKRRV 122
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 61.7 bits (143), Expect = 1e-08
Identities = 32/84 (38%), Positives = 51/84 (60%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
G+D+I A++G+G+TA F+I ILQ + + +LILAPTREL+ QI++ +I+LG +
Sbjct: 78 GKDIIGLAETGSGKTAAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIG 137
Query: 437 AKCHACIGGTNVREDIRQLEXGVH 508
+GG ++ QL H
Sbjct: 138 LDVCLILGGLDMVSQALQLSKKPH 161
>UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;
n=7; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
36 - Oryza sativa subsp. japonica (Rice)
Length = 501
Score = 61.7 bits (143), Expect = 1e-08
Identities = 32/70 (45%), Positives = 44/70 (62%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+GRDV+ A++G+G+TA F++ IL + AL LAPTRELA Q+ + ALG L
Sbjct: 113 EGRDVLGIAETGSGKTAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPL 172
Query: 434 NAKCHACIGG 463
+C A IGG
Sbjct: 173 GLRCLAAIGG 182
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 61.7 bits (143), Expect = 1e-08
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
A+ G+DV QA++G+G+TA F + +LQ ID S+ + QAL+L PTRELA Q+ + L
Sbjct: 36 AILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLA 95
Query: 425 DHL-NAKCHACIGG 463
L N K GG
Sbjct: 96 RFLPNTKILTLCGG 109
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 61.3 bits (142), Expect = 1e-08
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 433
G D+I QAQ+GTG+TA F++ +L ID + RE Q LILAPTRELA Q+ L
Sbjct: 60 GHDMIGQAQTGTGKTAAFALPMLSRIDPARREPQLLILAPTRELALQVATAFETYASQLP 119
Query: 434 NAKCHACIGGTNVREDIRQLEXG 502
A GG + ++ L G
Sbjct: 120 GVGVVAVYGGAPMGPQLKALRQG 142
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 61.3 bits (142), Expect = 1e-08
Identities = 31/88 (35%), Positives = 52/88 (59%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
A+ + +D+I ++Q+G+G+TA F+I I QL+D + QAL+L PTRELA Q+++ + +G
Sbjct: 37 AILEHKDIIVKSQTGSGKTAAFAIPICQLVDWDENKPQALVLVPTRELAIQVKEDMFNIG 96
Query: 425 DHLNAKCHACIGGTNVREDIRQLEXGVH 508
K A G ++L+ H
Sbjct: 97 RFKRLKVAAVYGKAPFYHQEKELKQKTH 124
Score = 31.9 bits (69), Expect = 9.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 141 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
+ F D L +ELL+ I FE P+ +QQ+ I
Sbjct: 2 IKSNFSDYQLSDELLKSISMLNFESPTKVQQQVI 35
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 61.3 bits (142), Expect = 1e-08
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L G DV+ AQ+GTG+TA FS+ +L IDT+ + QAL+L PTRELA Q+ +
Sbjct: 39 LLDGNDVLGLAQTGTGKTAAFSLPLLSRIDTTKNKPQALVLCPTRELAIQVAEAFQTYAR 98
Query: 428 HL-NAKCHACIGGTNVREDIRQLE 496
+ N GG ++R +R L+
Sbjct: 99 GVDNFHVLPIYGGADMRNQLRALK 122
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 61.3 bits (142), Expect = 1e-08
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATF---SISILQLIDTSI--RECQALILAPTRELAQQIQKVVIA 418
+GRD++ AQ+GTG+TA F SI L+ D I + C+ L+LAPTREL QI
Sbjct: 38 EGRDLLGIAQTGTGKTAAFMLPSIDRLREADNRIPFKSCRMLVLAPTRELVSQIAASAKD 97
Query: 419 LGDHLNAKCHACIGGTNVREDIRQLEXG 502
G K + +GGT+V +D +L G
Sbjct: 98 YGALAGLKVQSIVGGTSVNKDRNKLHRG 125
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 61.3 bits (142), Expect = 1e-08
Identities = 31/78 (39%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = +2
Query: 263 DVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIAL-GDHLNA 439
D+I Q++SGTG+T + I+++Q + +I + A+I+ PTRELA Q+Q L +
Sbjct: 64 DLIIQSKSGTGKTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDF 123
Query: 440 KCHACIGGTNVREDIRQL 493
KC A IGGT+V +D +++
Sbjct: 124 KCSAFIGGTDVAKDRKRM 141
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 61.3 bits (142), Expect = 1e-08
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-- 433
RDV+A+A++GTG+T +F I ILQ+++ + QAL+L TRELA Q KV L ++
Sbjct: 59 RDVVARAKNGTGKTGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPD 118
Query: 434 -NAKCHACIGGTNVRED 481
+ IGG ++ ED
Sbjct: 119 VTGRIMCAIGGVSIAED 135
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 61.3 bits (142), Expect = 1e-08
Identities = 29/85 (34%), Positives = 48/85 (56%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L QG+ + AQ+G+G+TA F IS+L L++ CQA+I++PT+EL+ Q +V+ LG
Sbjct: 37 LIQGQSISVNAQTGSGKTAAFGISLLSLVNPQKSICQAVIISPTKELSNQTLEVINTLGT 96
Query: 428 HLNAKCHACIGGTNVREDIRQLEXG 502
+ G +E ++ G
Sbjct: 97 RSGIRGVCLTSGVMAKEQFEKITKG 121
Score = 33.5 bits (73), Expect = 3.3
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 153 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIKDAMLSL 275
F+D+ +L++ IY YGFE PS +QQ +I I+ +S+
Sbjct: 6 FEDL-ASFDLIKAIYKYGFEIPSPVQQYSIPKLIQGQSISV 45
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 61.3 bits (142), Expect = 1e-08
Identities = 28/50 (56%), Positives = 39/50 (78%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKV 409
+++IAQ+QSGTG+TATF +++L I T + CQ L +APTRELA QI+ V
Sbjct: 116 QNMIAQSQSGTGKTATFLLAMLSRIRTDVHYCQCLCMAPTRELALQIESV 165
Score = 50.0 bits (114), Expect = 4e-05
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3
Query: 144 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIKD 260
V TF ++NLKE LL+GI A GF KPS IQ+RA+ I D
Sbjct: 75 VRTFQELNLKEPLLKGIAAMGFYKPSTIQERALSSLISD 113
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 61.3 bits (142), Expect = 1e-08
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = +2
Query: 263 DVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 439
++IAQAQSGTG+TA F +++L ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 718
Query: 440 KCHACIGGTNV 472
K H I G N+
Sbjct: 719 KIHYAIKGGNM 729
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 61.3 bits (142), Expect = 1e-08
Identities = 35/84 (41%), Positives = 47/84 (55%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
GRD+ AQAQSGTG+T F+++ LQ+ D S Q L+LA TRE+A Q LG +
Sbjct: 75 GRDIRAQAQSGTGKTGAFAVAALQICDMSQDVTQILVLASTREIAAQNAARFEDLGCFMG 134
Query: 437 AKCHACIGGTNVREDIRQLEXGVH 508
A+ GG+ + D LE H
Sbjct: 135 ARVALLSGGSPIAADKVALEKKPH 158
Score = 49.6 bits (113), Expect = 5e-05
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +3
Query: 123 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI 254
D+ ++ +T++D LKE+LL+GIY+ GFE PS IQ+ AI P I
Sbjct: 30 DSSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPII 73
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 60.9 bits (141), Expect = 2e-08
Identities = 27/81 (33%), Positives = 51/81 (62%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+G D++ QA +GTG+T F+I I++ + + +AL+L PTRELA Q+++ + L +
Sbjct: 36 EGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDVKALVLTPTRELAIQVKEQIYMLTKYK 95
Query: 434 NAKCHACIGGTNVREDIRQLE 496
+ GGT+V++++ L+
Sbjct: 96 RLSSYVFYGGTSVKQNLDILQ 116
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 60.9 bits (141), Expect = 2e-08
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLI--------DTSIRECQALILAPTRELAQQIQKVVI 415
RD+IA A++GTG+T + I ++Q + +TS AL+LAPTRELA QIQK +
Sbjct: 214 RDLIALAETGTGKTFAYLIPLIQFVLKLPKLTEETSASGPYALVLAPTRELALQIQKETL 273
Query: 416 ALGDHLNAKCHACIGGTNVREDIRQLEXG 502
L + CIGG ++ I +L G
Sbjct: 274 KLATPFGLRVCCCIGGEPMQPQIEELSNG 302
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 60.9 bits (141), Expect = 2e-08
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQI-QKVVIALGDH 430
+G DVI QAQ+GTG+T F I I++ I+ I++ Q+LIL PTREL Q+ +++ L +
Sbjct: 39 KGHDVIGQAQTGTGKTFAFGIPIIEKIEPKIQKTQSLILCPTRELTLQVYEELKKLLRFY 98
Query: 431 LNAKCHACIGGTNVREDIRQLEXGVH 508
+ GG + + R LE H
Sbjct: 99 QEIRIAVVYGGESYTKQFRALEAKPH 124
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 60.9 bits (141), Expect = 2e-08
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSI------RECQALILAPTRELAQQIQKV 409
L +G D++ AQ+GTG+TA F+I ILQ + R+ +AL+LAPTRELA QI +
Sbjct: 35 LLEGLDLLGCAQTGTGKTAAFAIPILQSLAMGQGLLKGKRQIRALVLAPTRELATQIAES 94
Query: 410 VIALGDHLNAKCHACIGGTNVREDIRQLEXGV 505
A G +L + GG R+LE G+
Sbjct: 95 FTAYGVNLPLRTLVIFGGVGQAPQTRKLEKGI 126
>UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=1; Hyphomonas neptunium ATCC 15444|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family -
Hyphomonas neptunium (strain ATCC 15444)
Length = 708
Score = 60.9 bits (141), Expect = 2e-08
Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 7/92 (7%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLI----DTSIRECQA---LILAPTRELAQQIQKVV 412
+GRD++ A++G+G+T F ++I + DT + LI+APTRELA Q+ + +
Sbjct: 36 EGRDLLVSARTGSGKTVAFGLAIANELLGGEDTFLIRAATPLGLIIAPTRELALQVAREL 95
Query: 413 IALGDHLNAKCHACIGGTNVREDIRQLEXGVH 508
L + NA+ C+GG ++R++ R LE G H
Sbjct: 96 RWLYANTNAEIATCVGGMDMRDERRALERGAH 127
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 60.9 bits (141), Expect = 2e-08
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L +D+I QAQ+GTG+TA F + +L I+ +I Q LILAPTRELA Q+ + V
Sbjct: 46 LLNNKDIIGQAQTGTGKTAAFVLPLLDKINLNINAPQLLILAPTRELAIQVSEAVQTYAR 105
Query: 428 HLNA-KCHACIGGTNVREDIRQLEXGVH 508
+ GG + +R L+ GVH
Sbjct: 106 GMKGFHVLPIYGGQSYDIQLRPLKRGVH 133
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 60.9 bits (141), Expect = 2e-08
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQI-QKVVIALGDH 430
QG+DVI QAQ+G+G+T F I L+ I+ + QA++L PTRELA+Q+ Q+ A D
Sbjct: 40 QGKDVIGQAQTGSGKTLCFVIPALEKIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAKDI 99
Query: 431 LNAKCHACIGGTNVREDIRQLEXGVH 508
N K GG + I+ L+ H
Sbjct: 100 GNIKVTTLCGGQPMGPQIQSLKHSPH 125
>UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Pseudomonas aeruginosa
Length = 397
Score = 60.9 bits (141), Expect = 2e-08
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 7/88 (7%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISIL-QLIDTS------IRECQALILAPTRELAQQIQKVV 412
+G+D I +AQ+GTG+TA F ISI+ QL+ T + E +ALI+APTREL QI K
Sbjct: 45 RGQDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDA 104
Query: 413 IALGDHLNAKCHACIGGTNVREDIRQLE 496
AL + +GG + + ++QLE
Sbjct: 105 AALTKYTGLNVMTFVGGMDFDKQLKQLE 132
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 60.5 bits (140), Expect = 2e-08
Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQ-LIDTSIRE-CQALILAPTRELAQQIQKVVIAL 421
L QG+D++ AQ+GTG+TA FSI ILQ L T R+ +AL+L PTRELA QI + A
Sbjct: 35 LLQGKDLLGCAQTGTGKTAAFSIPILQKLYKTDHRKGIKALVLTPTRELAIQIGESFEAY 94
Query: 422 GDHLNAKCHACIGGTNVREDIRQLEXGV 505
G + K GG + L G+
Sbjct: 95 GRYTGLKHAVIFGGVGQKPQTDALRSGI 122
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 60.5 bits (140), Expect = 2e-08
Identities = 26/51 (50%), Positives = 41/51 (80%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQK 406
+GRD+I Q+Q+GTG+T +F + I+Q ++ ++E QA+I+APTRELA QI +
Sbjct: 38 KGRDIIGQSQTGTGKTLSFLLPIVQNVNPELQEMQAIIVAPTRELAWQIHE 88
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 60.5 bits (140), Expect = 2e-08
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLI-DTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
GRD++A AQ+GTG+T F I L+++ DT Q LIL PTRELA Q+ V L
Sbjct: 64 GRDILATAQTGTGKTLAFIIPALEMLRDTEPCGVQVLILVPTRELAMQVHGVYEQLKGKK 123
Query: 434 NAKCHACIGGTNVREDIRQLEXG 502
+GGT+ R I+ + G
Sbjct: 124 LKSAALVMGGTSERNQIQSIRSG 146
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 60.5 bits (140), Expect = 2e-08
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLI------DTSIRECQALILAPTRELAQQIQK 406
A+ GRDV+A A +G+G+TA F++ +LQ + + S + + L+L PTRELAQQ+
Sbjct: 42 AVLSGRDVLAGANTGSGKTAAFAVPLLQRLFEAKTAEKSAGQVRCLVLVPTRELAQQVAD 101
Query: 407 VVIALGDHLNA--KCHACIGGTNVREDIRQLEXG 502
++ H N K A GG +V ++ L G
Sbjct: 102 SFLSYASHFNGQLKIVAAFGGVSVNLQMQSLRAG 135
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 60.5 bits (140), Expect = 2e-08
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +2
Query: 263 DVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 442
D I AQ+GTG+TA F + +L ID + QALIL+PTREL QQI+K + +++ +
Sbjct: 42 DFIGLAQTGTGKTAAFGLPVLHHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDR 101
Query: 443 --CHACIGGTNVREDIRQLEXGVH 508
A GG + + L+ H
Sbjct: 102 IFLEAVFGGEKIDRQMNNLKRTTH 125
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 60.5 bits (140), Expect = 2e-08
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-N 436
+DV QAQ+GTG+TA F I +L+ ID+ QA+IL PTRELA Q+ + + L +L
Sbjct: 42 KDVTGQAQTGTGKTAAFGIPLLENIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPK 101
Query: 437 AKCHACIGGTNVREDIRQLEXGV 505
GG + I+ L+ GV
Sbjct: 102 IDVLPVYGGQPIDRQIKALQKGV 124
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 60.1 bits (139), Expect = 3e-08
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISIL-QLIDTSIRECQALILAPTRELAQQIQKVVIAL 421
A+ QGRDV+ AQ+GTG+TA +++ +L QL + + +ALIL+PTR+LA QI +
Sbjct: 46 AILQGRDVVGLAQTGTGKTAAYALPLLQQLTEGPPGQLRALILSPTRDLADQICVAMNHF 105
Query: 422 GDHLNAKCHACIGG-TNVREDIRQLEXGV 505
G + +C GG N + L GV
Sbjct: 106 GRQTHLRCATIYGGKINYTRQYQLLTGGV 134
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 60.1 bits (139), Expect = 3e-08
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISIL-QLIDTSIRE----CQALILAPTRELAQQIQKVVIAL 421
GRDV+ AQ+GTG+TA+F++ IL +L++ I+ + L+L+PTREL+ QI A
Sbjct: 53 GRDVVGIAQTGTGKTASFALPILHRLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAY 112
Query: 422 GDHLNAKCHACIGGTNVREDIRQLEXGV 505
G H+ IGG + +R L GV
Sbjct: 113 GRHIRLSSTLAIGGVPMGRQVRSLMQGV 140
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 60.1 bits (139), Expect = 3e-08
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISIL-QLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
GRDV+A A +G+G+TA F + IL QLID +AL++ PTRELA QI + + L H
Sbjct: 38 GRDVMASAVTGSGKTAAFLLPILHQLIDRPRGTTRALVITPTRELAAQILEDLNDLAVHT 97
Query: 434 NAKCHACIGGTNVREDIRQLEXGV 505
A GG ++R GV
Sbjct: 98 PISAAAVFGGVSIRPQEHAFRRGV 121
>UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Superfamily II DNA and RNA helicase -
Leuconostoc mesenteroides subsp. mesenteroides (strain
ATCC 8293 /NCDO 523)
Length = 431
Score = 60.1 bits (139), Expect = 3e-08
Identities = 30/83 (36%), Positives = 47/83 (56%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L G + A +GTG+T F + +L IDT+++ Q LILAP++ELA Q +V G+
Sbjct: 27 LTDGDSIFGLAPTGTGKTLAFVLPVLSRIDTNLKRTQVLILAPSQELAMQTTQVAREWGN 86
Query: 428 HLNAKCHACIGGTNVREDIRQLE 496
+ A + IGG N R +++
Sbjct: 87 AVGASVASLIGGANGRRQADKIK 109
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 60.1 bits (139), Expect = 3e-08
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L RDV+ QAQ+GTG+TA+F++ IL ID QAL+LAPTRELA Q+ +
Sbjct: 41 LLNNRDVLGQAQTGTGKTASFALPILARIDIKQTTPQALVLAPTRELAIQVAEAFQRYAT 100
Query: 428 HL-NAKCHACIGGTNVREDIRQLEXGVH 508
++ GG + + L GVH
Sbjct: 101 YIPGFHVLPIYGGQSYGAQLSALRRGVH 128
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 60.1 bits (139), Expect = 3e-08
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L + D++A AQ+GTG+TA F ++Q ID + R QALIL+PTREL QI +
Sbjct: 37 LEKDIDLVALAQTGTGKTAAFGFPVIQKIDANNRNTQALILSPTRELCLQITNELKNYSK 96
Query: 428 H-LNAKCHACIGGTNVREDIRQLEXG 502
+ A GG ++ E R ++ G
Sbjct: 97 YEKGINVVAVYGGASITEQARDIKRG 122
Score = 34.3 bits (75), Expect = 1.9
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 153 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
F+ + L E LLR I GFE P+ +Q++AI
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAI 33
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 60.1 bits (139), Expect = 3e-08
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIREC-----QALILAPTRELAQQIQKVVIA 418
+GRDV+ AQ+GTG+TA ++ IL + + R+ AL+LAPTRELA QI A
Sbjct: 38 EGRDVLGCAQTGTGKTAALALPILNQLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDA 97
Query: 419 LGDHLNAKCHACIGGTNVREDIRQLEXGVH 508
G HL + GG ++ L+ G H
Sbjct: 98 YGRHLKLRSVLIYGGVGQGNQVKALKRGAH 127
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 60.1 bits (139), Expect = 3e-08
Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSI-----RECQALILAPTRELAQQIQKVVIA 418
+G D++ AQ+GTG+TA F + IL I + R C+AL+LAPTRELA QI
Sbjct: 93 EGHDLVGIAQTGTGKTAAFVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAART 152
Query: 419 LGDHLNAKCHACIGGTNVREDIRQLEXGV 505
G IGG R++E GV
Sbjct: 153 YGKFTRPSVAVVIGGAKPGPQARRMESGV 181
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 60.1 bits (139), Expect = 3e-08
Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIR-----ECQALILAPTRELAQQIQKVVIAL 421
G+DV QAQ+GTG+TATF ISI + + + +ALILAPTREL QI+K AL
Sbjct: 38 GKDVAGQAQTGTGKTATFLISIFTKLLSQAKTGGEHHPRALILAPTRELVVQIEKDAQAL 97
Query: 422 GDHLNAKCHACIGGTNVREDIRQLEXG 502
G + A GG + + L+ G
Sbjct: 98 GKYTGFNIQAIYGGVDYMKQRDALKAG 124
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 60.1 bits (139), Expect = 3e-08
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLID---TSIREC--QALILAPTRELAQQIQKVV 412
L +G D+I AQ+GTG+TA F++ IL +D + C Q L+L+PTRELA QI +
Sbjct: 30 LLEGSDLIGCAQTGTGKTAAFALPILNQLDLDRSRADACAPQVLVLSPTRELAVQIAQSF 89
Query: 413 IALGDHLNAKCHACIGGTNVREDIRQLEXGVH 508
G ++ + GG +R L+ GVH
Sbjct: 90 NVYGRNVKFRLTTIFGGVGQNPQVRALKRGVH 121
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 60.1 bits (139), Expect = 3e-08
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLI-----DTSIRECQALILAPTRELAQQIQKVVIAL 421
GRDV+ AQ+GTG+TA F + +L + + R C+ LILAPTREL QI + + A
Sbjct: 108 GRDVLGIAQTGTGKTAAFGLPLLDALMKAGTKPAPRTCRGLILAPTRELVSQICESLRAF 167
Query: 422 GDHLNAKCHACIGGTNVREDIRQLEXG 502
+ + K +GG + I++ E G
Sbjct: 168 TEGSHLKLQVIVGGVAIGPQIKRAERG 194
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 60.1 bits (139), Expect = 3e-08
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
G D++ Q++SGTG+T + ++ LQ+ S + + L++ PTRELA Q+ + LG+ L
Sbjct: 62 GMDLLVQSKSGTGKTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGEKLR 121
Query: 437 A-KCHACIGGTNVREDIRQL 493
+ K + +GGT+V D +L
Sbjct: 122 SFKVSSFMGGTDVTRDREKL 141
>UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 606
Score = 60.1 bits (139), Expect = 3e-08
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQA----LILAPTRELAQQIQKVVIALG 424
G DV+AQA++GTG+T F + ++Q + ++ A LIL+PTRELAQQI +V +
Sbjct: 104 GDDVLAQAKTGTGKTLAFLVPVVQRLLSAPMPPSALTSILILSPTRELAQQINEVAERMS 163
Query: 425 DHLNAK--CHACIGGTNVREDIRQLE 496
L+ K + +GGTN+ DI+ L+
Sbjct: 164 TALSKKFGTRSVVGGTNMDRDIKNLK 189
>UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1,; n=2;
Theria|Rep: PREDICTED: similar to eukaryotic translation
initiation factor 4A, isoform 1, - Monodelphis domestica
Length = 59
Score = 59.7 bits (138), Expect = 4e-08
Identities = 25/48 (52%), Positives = 33/48 (68%)
Frame = +3
Query: 114 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 257
G +++DW+++V++FDDMNL E LL GIYAYGFEK CIK
Sbjct: 10 GVIESDWNEIVDSFDDMNLSESLLCGIYAYGFEKAICHSVTCNSSCIK 57
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 59.7 bits (138), Expect = 4e-08
Identities = 31/86 (36%), Positives = 50/86 (58%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
+ + +D+IA +Q+G+G+TAT +I I ++T + + QALI+ PTRELA Q +G
Sbjct: 49 IQKKQDLIALSQTGSGKTATCAIPICNRVNTELTDIQALIIVPTRELALQYATETQKIGK 108
Query: 428 HLNAKCHACIGGTNVREDIRQLEXGV 505
+ K A GG + +L+ GV
Sbjct: 109 YKGVKAFAIFGGEDSALQQSKLKHGV 134
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 59.7 bits (138), Expect = 4e-08
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSI-----RECQALILAPTRELAQQIQKVV 412
L +G+D+ AQ+GTG+TA F++ + + T+ R C+ LIL+PTRELA QI +
Sbjct: 40 LLEGKDLCGIAQTGTGKTAAFALPSIHYLATNPQARPQRGCRMLILSPTRELASQIARAC 99
Query: 413 IALGDHLNAKCHACIGGTNVREDIRQLEXG 502
HL +A GG + +R L+ G
Sbjct: 100 NDYTRHLRMSVNAVFGGVPIGRQMRMLDRG 129
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 59.7 bits (138), Expect = 4e-08
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQL-----IDTSIRECQALILAPTRELAQQIQKV 409
AL G D++ AQ+GTG+TA FS+ I+ ID + ++LIL PTRELA QI +
Sbjct: 35 ALINGNDLLGIAQTGTGKTAAFSLPIINKFGRNKIDIKAKSTRSLILTPTRELASQIMQN 94
Query: 410 VIALGDHLNAKCHACIGGTNVREDIRQLEXGV 505
+ D L K GG + + +E G+
Sbjct: 95 IDDYSDGLGLKTKVVYGGVGRQAQVDSIELGL 126
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 59.7 bits (138), Expect = 4e-08
Identities = 30/81 (37%), Positives = 45/81 (55%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+G+D+I A +G+G+T F I+Q I+ +AL+L PTRELA+Q+Q + H
Sbjct: 38 EGKDIIGGAATGSGKTLAFGCGIIQKIEKG-NGIRALVLTPTRELAEQVQNSLKEFSRHK 96
Query: 434 NAKCHACIGGTNVREDIRQLE 496
+ GG + IRQLE
Sbjct: 97 QLRVAPIYGGVAINPQIRQLE 117
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 59.3 bits (137), Expect = 6e-08
Identities = 32/80 (40%), Positives = 47/80 (58%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
G D+IA AQ+G+G+T F++S+L + E + LIL P+RE+AQQI KV + L +
Sbjct: 70 GSDIIAIAQTGSGKTLAFALSLLTTLQKK-PEARGLILVPSREMAQQIYKVFLELCAEMP 128
Query: 437 AKCHACIGGTNVREDIRQLE 496
IGGT + QL+
Sbjct: 129 VSVCLAIGGTTGSKQANQLK 148
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 59.3 bits (137), Expect = 6e-08
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLI----DTSIRECQ----ALILAPTRELAQQIQKVV 412
GRDV+ AQ+GTG+TA+FS+ I+Q + +TS + ALIL PTRELA Q+ V
Sbjct: 48 GRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANV 107
Query: 413 IALGDHLNAKCHACIGGTNVREDIRQLEXGV 505
A H + GG ++ + +L GV
Sbjct: 108 HAYAKHTPLRSAVVFGGVDMNPQMAELRRGV 138
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 59.3 bits (137), Expect = 6e-08
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDT-----SIRECQALILAPTRELAQQIQKVVIAL 421
G D++ AQ+GTG+TA F+I +LQL++ R+ ++LI+ PTRELA QI + A
Sbjct: 119 GNDLLGCAQTGTGKTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAY 178
Query: 422 GDHLNAKCHACIGGTNVREDIRQLEXGV 505
G H GG N L+ G+
Sbjct: 179 GRHTGLTSTVIFGGVNQNPQTASLQKGI 206
>UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3;
Rhodospirillales|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 731
Score = 59.3 bits (137), Expect = 6e-08
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQ-LIDTSIRECQA-----LILAPTRELAQQIQKVVIAL 421
RD++ AQ+G+G+T + +++ L+ R QA LI+APTRELA Q+Q+ ++ L
Sbjct: 81 RDLLVSAQTGSGKTVAYGLALADTLLGADERLGQAGAPLALIVAPTRELAMQVQQELLWL 140
Query: 422 GDHLNAKCHACIGGTNVREDIRQLEXGVH 508
A+ +CIGG + R + + LE G H
Sbjct: 141 YGPAGARVVSCIGGMDARREAQALERGCH 169
>UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Maricaulis maris (strain MCS10)
Length = 787
Score = 59.3 bits (137), Expect = 6e-08
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLI---DTSIRECQ---ALILAPTRELAQQIQKVVI 415
+GRD++ AQ+G+G+TA F +++ + + D ALI+APTRELA Q+Q+ +
Sbjct: 36 EGRDLLVSAQTGSGKTAAFGMAMAKTLLGDDDQFNRPDLPMALIVAPTRELALQVQRELA 95
Query: 416 ALGDHLNAKCHACIGGTNVREDIRQLEXGVH 508
L + +C+GG + R + + LE G H
Sbjct: 96 WLYGEARGQIASCVGGMDPRAERKALERGCH 126
>UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Desulfovibrio vulgaris subsp. vulgaris
(strain DP4)
Length = 577
Score = 59.3 bits (137), Expect = 6e-08
Identities = 29/88 (32%), Positives = 48/88 (54%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L GRD++ Q+++G+G+T F + +L+ +D + QAL+L PTRELA Q++ L +
Sbjct: 71 LFDGRDLMVQSRTGSGKTGAFLLPLLERLDPAEASTQALVLVPTRELALQVEHEARTLFE 130
Query: 428 HLNAKCHACIGGTNVREDIRQLEXGVHW 511
+ A GG + L G H+
Sbjct: 131 GTGLRVAAVYGGVGYGKQNDALREGAHF 158
>UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Exiguobacterium sibiricum
255-15|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Exiguobacterium sibiricum 255-15
Length = 391
Score = 58.8 bits (136), Expect = 8e-08
Identities = 30/83 (36%), Positives = 46/83 (55%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L + +DV+ +A +GTG+T + I L+LID + Q +I APTREL QI +V+
Sbjct: 31 LRERKDVLVEAPTGTGKTLAYVIPALELIDENEPHIQVVITAPTRELVMQIHQVIQLFSQ 90
Query: 428 HLNAKCHACIGGTNVREDIRQLE 496
K A IGG ++ +L+
Sbjct: 91 GSGIKSGAFIGGVELKRQHERLK 113
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 58.8 bits (136), Expect = 8e-08
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+G++VI +A++GTG+T + + I++ ID S E QA+IL+PT EL QI V+ L L
Sbjct: 38 KGKNVIGKAETGTGKTLAYLLPIIEKIDDSKNEMQAIILSPTHELGVQINNVLNDLKRGL 97
Query: 434 NAKCHA--CIGGTNVREDIRQLEXGVH 508
K + +G N++ + +L+ H
Sbjct: 98 GKKITSTTLVGSGNIKRQMEKLKNKPH 124
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 58.8 bits (136), Expect = 8e-08
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDT-----SIRECQALILAPTRELAQQIQKVVIAL 421
GRD++ AQ+GTG+TA F++ +L + T + R +ALIL+PTRELA QI + + L
Sbjct: 41 GRDMLGIAQTGTGKTAAFALPLLHHLMTVGGKPTTRTTKALILSPTRELAVQIAESIADL 100
Query: 422 GDHLNAKCHACIGGTNVREDIRQLEXGV 505
+ GG +VR I+ L GV
Sbjct: 101 SEGTPISHCVVFGGVSVRPQIQALARGV 128
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 58.8 bits (136), Expect = 8e-08
Identities = 31/79 (39%), Positives = 47/79 (59%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
G D++ QAQ+GTG+TA+F I IL + QAL+L PTRELA Q+ + + +L +
Sbjct: 41 GLDLMGQAQTGTGKTASFGIPILNRVIKG-EGLQALVLCPTRELAVQVTEEISSLSRRMR 99
Query: 437 AKCHACIGGTNVREDIRQL 493
+ A GG ++ +R L
Sbjct: 100 IQVLAIYGGQSIELQLRSL 118
Score = 32.3 bits (70), Expect = 7.5
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 147 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
E F M LK +LL+ I GFEKP+ IQ ++I
Sbjct: 4 ENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSI 35
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 58.8 bits (136), Expect = 8e-08
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRE---CQALILAPTRELAQQIQKVVIA 418
L +G+D++ A +GTG+TA FS+ +LQ I AL+L PTRELA Q+ + +
Sbjct: 70 LLEGKDLLGIAATGTGKTAAFSLPLLQRITPGAHAPFTASALVLVPTRELAMQVAEAIHR 129
Query: 419 LGDHLNAKCHACIGGTNVREDIRQLEXGV 505
G L GG + + +R L+ GV
Sbjct: 130 YGQKLGISVVPLYGGQVISQQLRVLKRGV 158
Score = 32.7 bits (71), Expect = 5.7
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +3
Query: 81 GSYDGPPG-MDPGTLDT---DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 248
G D PPG +D T + + TF+ + L L+ + A G+E+P+ IQ+ A+ P
Sbjct: 10 GRCDFPPGGIDGATSPSTVKETSAADNTFESLGLLPPLVEALSALGYEEPTPIQRAALPP 69
Query: 249 CIK 257
++
Sbjct: 70 LLE 72
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 58.8 bits (136), Expect = 8e-08
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVV 412
RDV+ AQ+GTG+TA F + +L ++D R QAL+LAPTRELA Q + +
Sbjct: 83 RDVVGIAQTGTGKTAAFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAI 133
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 58.8 bits (136), Expect = 8e-08
Identities = 27/60 (45%), Positives = 42/60 (70%)
Frame = +2
Query: 263 DVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 442
++IAQ+QSGTG+TA F++ +L +D SI QA+ ++PT+ELA Q +V+ +G N K
Sbjct: 110 NLIAQSQSGTGKTAAFTLGMLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIK 169
Score = 46.0 bits (104), Expect = 6e-04
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = +3
Query: 144 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
V+TF+++ LK ELL+G+YA G+ KPS IQ+ A+
Sbjct: 69 VKTFEELGLKPELLKGVYAMGYNKPSKIQEAAL 101
>UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG425
homolog; n=4; Mycoplasma|Rep: Probable ATP-dependent RNA
helicase MG425 homolog - Mycoplasma pneumoniae
Length = 450
Score = 58.8 bits (136), Expect = 8e-08
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLI--DTSIRECQALILAPTRELAQQIQKVVIALGD 427
Q +++I + +GTG+TA F I +++ + S Q L++APTRELA+QI+ I
Sbjct: 39 QHQNLIVHSPTGTGKTAVFGIPVIETLLKKPSKGTTQTLVVAPTRELAEQIKTTFINFAK 98
Query: 428 HLNAKCHACIGGTNVREDIRQLE 496
H + K + IGG + + ++QLE
Sbjct: 99 HTHLKVVSLIGGIPIWQQLKQLE 121
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 58.8 bits (136), Expect = 8e-08
Identities = 30/64 (46%), Positives = 42/64 (65%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
AL G DV+ AQ+GTG+TA F+I +L ID + + QAL+L PTRELA Q+ + G
Sbjct: 46 ALMAGSDVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYG 105
Query: 425 DHLN 436
+L+
Sbjct: 106 AYLS 109
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 58.4 bits (135), Expect = 1e-07
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+G+D+I AQ+GTG+TA F+I ++L++ + QALIL PTREL Q+ + L +
Sbjct: 45 KGKDIIGHAQTGTGKTAAFAIPTIELLEVESKHLQALILCPTRELVIQVSEQFRKLIKYK 104
Query: 434 -NAKCHACIGGTNVREDIRQL 493
N + GG + +R L
Sbjct: 105 GNFEVVPIYGGQEIERQLRAL 125
>UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacillus cereus group|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 389
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/81 (32%), Positives = 49/81 (60%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+G+DVIA++ +GTG+T + + +L I+ +++ Q ++LAPTREL QI + V
Sbjct: 34 EGQDVIAESPTGTGKTLAYLLPLLHKINPEVKQPQVVVLAPTRELVMQIHEEVQKFTAGT 93
Query: 434 NAKCHACIGGTNVREDIRQLE 496
+ IGG +++ + +L+
Sbjct: 94 EISGASLIGGADIKRQVEKLK 114
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 58.4 bits (135), Expect = 1e-07
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTS--IRECQALILAPTRELAQQIQKVVIAL 421
L +G+DV+ +Q+G+G+TA F + +LQ + + +ALIL PTRELA Q V L
Sbjct: 54 LLEGKDVLVGSQTGSGKTAAFVLPMLQKLTEAGPAPGPRALILEPTRELAAQTAAVCRQL 113
Query: 422 GDHLNAKCHACIGGTNVREDIRQLEXGV 505
G L+ K GGT+ + ++ + GV
Sbjct: 114 GRRLSLKTRVICGGTSREQQVQSVSDGV 141
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 58.4 bits (135), Expect = 1e-07
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQ-LIDTSIRECQALILAPTRELAQQIQKVVIAL-GDH 430
GRD++ QAQ+GTG+TA F++ +++ L D + L++ PTRELA Q+ + + +
Sbjct: 88 GRDLLGQAQTGTGKTAAFALPLIEKLADNKELNAKVLVMTPTRELATQVAESFKSYSSES 147
Query: 431 LNAKCHACIGGTNVREDIRQLEXGV 505
N K A GGT+ R I L+ V
Sbjct: 148 TNFKTIAIYGGTDYRNQIYALKRKV 172
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 58.4 bits (135), Expect = 1e-07
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 6/90 (6%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDT----SIRECQALILAPTRELAQQIQKVV 412
A+ +G+D++ AQ+G+G+TA+F + ILQ++ T R AL+L PTRELA Q+ +V
Sbjct: 42 AILKGKDILGIAQTGSGKTASFVLPILQMLQTKPLGKNRHINALVLVPTRELAVQVGQVF 101
Query: 413 IALGDHL--NAKCHACIGGTNVREDIRQLE 496
A + L K A GG ++ + QL+
Sbjct: 102 QAFSNALPNKIKSLAVYGGVSINPQMIQLQ 131
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 58.4 bits (135), Expect = 1e-07
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
AL G ++ AQ+GTG+TA F++ +L ID ++ E Q L+LAPTRELA Q+ +
Sbjct: 57 ALLAGNHLLGVAQTGTGKTAAFALPLLSRIDANVAEPQILVLAPTRELAIQVAEAFTTYA 116
Query: 425 DHL-NAKCHACIGGTNVREDIRQLEXG 502
N GG + IR L+ G
Sbjct: 117 SKFRNFHVLPIYGGQDFSPQIRGLKRG 143
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 58.4 bits (135), Expect = 1e-07
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIR-----ECQALILAPTRELAQQIQKV 409
A+ QG+D++A A++GTG+TA F++ IL+ + + R + + L+L PTRELA Q+ +
Sbjct: 34 AIMQGKDILAGARTGTGKTAAFALPILEKLSSKERNKKRPQTRVLVLVPTRELANQVTQN 93
Query: 410 VIALGDHLNAKCHACIGGTNVREDIRQLEXGV 505
+ + L K GG + I+ L+ G+
Sbjct: 94 IKSYAKKLPFKTLPVFGGVSSYPQIQALKSGI 125
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 58.4 bits (135), Expect = 1e-07
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQ-----ALILAPTRELAQQIQKVVIAL 421
GRD++ AQ+G+G+T + + + I+ R + AL+LAPTRELAQQIQ+V I
Sbjct: 194 GRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEF 253
Query: 422 GDHLNAKCHACIGGTNVREDIRQLEXGV 505
G + + + GG + R LE GV
Sbjct: 254 GSNTHVRNTCIFGGAPKGQQARDLERGV 281
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 58.4 bits (135), Expect = 1e-07
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDT-SIRECQALILAPTRELAQQIQKVVIALGDHL 433
G+DV+A +++G+G+TA F I +LQ + +AL+++PTRELA Q KVV LG
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFT 120
Query: 434 NAKCHACIGGTNVRE 478
+C +GG + E
Sbjct: 121 GLRCACLVGGDQIEE 135
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 58.4 bits (135), Expect = 1e-07
Identities = 29/56 (51%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLID-TSIRECQALILAPTRELAQQIQKVVIALG 424
R++IAQ+QSGTG+T F ++IL +D + QAL LAP+RELA+QIQ V+ ++G
Sbjct: 136 RNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSIG 191
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 58.0 bits (134), Expect = 1e-07
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
AL GRDV+ QAQ+GTG+TA F++ +L + + Q L+LAPTRELA Q+ +
Sbjct: 48 ALLAGRDVLGQAQTGTGKTAAFALPLLTRTVLNQVKPQVLVLAPTRELAIQVAEAFQRYA 107
Query: 425 DHLNA-KCHACIGGTNVREDIRQLEXGVH 508
++ + GG + + + L+ GVH
Sbjct: 108 ASISGFRVLPVYGGQSYGQQLAALKRGVH 136
>UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=30;
cellular organisms|Rep: DEAD/DEAH box helicase-like
protein - Silicibacter sp. (strain TM1040)
Length = 710
Score = 58.0 bits (134), Expect = 1e-07
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLI---DTSIRECQ---ALILAPTRELAQQIQKVVIA 418
G D++ AQ+G+G+T F ++I I D + AL++APTRELA Q+++ +
Sbjct: 39 GADLLVSAQTGSGKTVGFGLAIAPTILGEDGTFERAASPLALVIAPTRELALQVKRELSW 98
Query: 419 LGDHLNAKCHACIGGTNVREDIRQLEXGVH 508
L A +C+GG ++R++ R LE G H
Sbjct: 99 LYGDAGAVLASCVGGMDMRDERRALERGAH 128
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 58.0 bits (134), Expect = 1e-07
Identities = 30/87 (34%), Positives = 45/87 (51%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
A+ GRDV AQ+GTG+TA F++ IL + R + L+L PTRELA Q+++
Sbjct: 166 AVLAGRDVTGSAQTGTGKTAAFALPILHKLGAHERRLRCLVLEPTRELALQVEEAFQKYS 225
Query: 425 DHLNAKCHACIGGTNVREDIRQLEXGV 505
+ + GG + L+ GV
Sbjct: 226 KYTDLTATVVYGGVGYGKQREDLQRGV 252
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 58.0 bits (134), Expect = 1e-07
Identities = 31/88 (35%), Positives = 50/88 (56%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
AL +GRD++ + +G+G+T F I I++ + + ALI+ PTRELA QI + +L
Sbjct: 88 ALLEGRDLLGISNTGSGKTGAFLIPIIEHALKNPGQFTALIVTPTRELALQIDQEFKSLS 147
Query: 425 DHLNAKCHACIGGTNVREDIRQLEXGVH 508
+ IGGTN+ D++ L +H
Sbjct: 148 KGMRLHSATFIGGTNINTDMKVLSRKLH 175
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 58.0 bits (134), Expect = 1e-07
Identities = 26/61 (42%), Positives = 43/61 (70%)
Frame = +2
Query: 263 DVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 442
++IAQA++G+G+TATF++++L ++ ++ QAL + PTRELA Q +V+ LG K
Sbjct: 139 NIIAQAKNGSGKTATFALAMLSKVNVNVPLVQALCICPTRELATQNVQVIQKLGQFTQIK 198
Query: 443 C 445
C
Sbjct: 199 C 199
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 58.0 bits (134), Expect = 1e-07
Identities = 34/82 (41%), Positives = 47/82 (57%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
GRDV+ QA +GTG+T +SIS+LQ I Q LI+APTRELA QI + V +
Sbjct: 39 GRDVVGQAHTGTGKTGAYSISMLQEIKEG-GGIQGLIVAPTRELAVQITEEVKKFAKYTK 97
Query: 437 AKCHACIGGTNVREDIRQLEXG 502
+ A GG ++ + L+ G
Sbjct: 98 VRPVAIYGGQSMGVQLDALKRG 119
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 58.0 bits (134), Expect = 1e-07
Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQA-----LILAPTRELAQQIQKVVIAL 421
GRD+I A++G+G+T ++ + +++ I + L+L+PTRELA QI+K ++
Sbjct: 425 GRDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLVLSPTRELALQIEKEILKF 484
Query: 422 GDHLNAKCHACIGGTNVREDIRQLEXGVH 508
++ K C GG+N+ I +L+ GV+
Sbjct: 485 SSTMDLKVCCCYGGSNIENQISELKRGVN 513
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 58.0 bits (134), Expect = 1e-07
Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLID----TSIRECQALILAPTRELAQQIQKVVIAL 421
QG DV+A A++G+G+T F + +++ + T ALI++PTRELA QI +V+ +
Sbjct: 77 QGHDVLAAAKTGSGKTLAFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKI 136
Query: 422 GDHLNAKCHACIGGTNVREDIRQL 493
G H + IGG +V+ ++ ++
Sbjct: 137 GSHTSFSAGLVIGGKDVKFELERI 160
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 57.6 bits (133), Expect = 2e-07
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 439
+DVIA+A +GTG+T F I +++ ID QAL+LAPTRELA QIQ + L +
Sbjct: 50 KDVIAKAPTGTGKTFAFGIPMVEHIDPESDAVQALVLAPTRELALQIQDELRDLCEFKEG 109
Query: 440 KCHACI-GGTNVREDIRQLE 496
C+ GG + + I L+
Sbjct: 110 VRSVCLYGGAPIEKQITTLK 129
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 57.6 bits (133), Expect = 2e-07
Identities = 29/59 (49%), Positives = 42/59 (71%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
L+ ++IAQA +G+G+TATF++++L +DT I Q + L PTRELA+Q Q VV LG
Sbjct: 147 LNSPMNLIAQAHNGSGKTATFALAMLGKVDTRIIHPQCMCLCPTRELARQNQDVVNELG 205
Score = 37.9 bits (84), Expect = 0.15
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +3
Query: 153 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIKDAMLSL 275
+ D+NL +LL+GIY GF +PS I Q A +P I ++ ++L
Sbjct: 114 WSDLNLSPDLLKGIYNKGFNRPSKI-QAAALPLILNSPMNL 153
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 57.6 bits (133), Expect = 2e-07
Identities = 28/70 (40%), Positives = 43/70 (61%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
QGRD+I A++G+G+T F++ IL + + + AL+L PTRELA QI + ALG +
Sbjct: 49 QGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSI 108
Query: 434 NAKCHACIGG 463
+ +GG
Sbjct: 109 GVQSAVIVGG 118
>UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Shewanella oneidensis
Length = 439
Score = 57.6 bits (133), Expect = 2e-07
Identities = 40/105 (38%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Frame = +2
Query: 218 FCNP--ATRNNALHQGRDVIAQAQSGTGQTATFSISILQ-LIDTSIRECQ------ALIL 370
FC P A L Q +D+ QAQ+GTG+T F ++ L+ +SI E + A+I+
Sbjct: 31 FCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNHLLSSSIPEGRQLNQPRAIIM 90
Query: 371 APTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLEXGV 505
APTRELA QI K I L H K GG + + L+ GV
Sbjct: 91 APTRELAIQIAKDAILLAKHTRLKVGIVYGGESYDVQRKVLDQGV 135
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 57.6 bits (133), Expect = 2e-07
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 433
G DVI QA+SG G+TA F +S LQ I+ S + AL+L TRELA QI + +L
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLP 142
Query: 434 NAKCHACIGGTNVR 475
+ K GG N++
Sbjct: 143 DTKVSVFYGGVNIK 156
Score = 33.1 bits (72), Expect = 4.3
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = +3
Query: 153 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIKDAMLSL 275
F D LK ELLR I GFE PS +Q CI A+L +
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHE----CIPQAILGM 84
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 57.6 bits (133), Expect = 2e-07
Identities = 28/70 (40%), Positives = 43/70 (61%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
QGRD+I A++G+G+T F++ IL + + + AL+L PTRELA QI + ALG +
Sbjct: 60 QGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSI 119
Query: 434 NAKCHACIGG 463
+ +GG
Sbjct: 120 GVQSAVIVGG 129
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 57.6 bits (133), Expect = 2e-07
Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDT-----SIRECQ----ALILAPTRELAQQIQK 406
Q RD+I A++G+G+TA F I +L I T I E A+ILAPTRELAQQI++
Sbjct: 427 QNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEE 486
Query: 407 VVIALGDHLNAKCHACIGGTNVRED 481
I G L + A IGG + RED
Sbjct: 487 ETIKFGKPLGIRTVAVIGGIS-RED 510
>UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1; n=1; Canis
lupus familiaris|Rep: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1 - Canis
familiaris
Length = 430
Score = 57.2 bits (132), Expect = 2e-07
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = +2
Query: 269 IAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKV 409
I+ + SGTG TATF+ISILQ ID ++ +A LAPTR LAQQIQKV
Sbjct: 182 ISCSPSGTGNTATFAISILQQIDLDLKATKASGLAPTRVLAQQIQKV 228
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/81 (34%), Positives = 45/81 (55%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+G D+IAQAQ+GTG+TA F + I+ ++ + L++ PTRELA Q+ + G
Sbjct: 37 EGHDMIAQAQTGTGKTAAFGLPIMSMMKAD-GSVEGLVIVPTRELAMQVSDELFRFGKLS 95
Query: 434 NAKCHACIGGTNVREDIRQLE 496
K GGT + I +++
Sbjct: 96 GLKTATVYGGTAYGKQIERIK 116
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 57.2 bits (132), Expect = 2e-07
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Frame = +2
Query: 218 FCNP--ATRNNALHQGRDVIAQAQSGTGQTATFSISIL-QLIDTSIRE----C-QALILA 373
+C P A AL +GRD+ +AQ+GTG+TA F +++ +L++ + E C +AL+LA
Sbjct: 147 YCTPIQALTLPALLEGRDLAGKAQTGTGKTAAFLLAVFTRLLNHPLEERKPGCPRALVLA 206
Query: 374 PTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLEXGV 505
PTRELA QIQK L GG + + R LE V
Sbjct: 207 PTRELAMQIQKDAEVLEIFTGLTSVVVFGGMDHEKQRRSLEQPV 250
>UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=2; Proteobacteria|Rep: ATP-dependent
RNA helicase, DEAD box family protein - Alteromonas
macleodii 'Deep ecotype'
Length = 441
Score = 57.2 bits (132), Expect = 2e-07
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDT----SIRECQALILAPTRELAQQIQKVVIAL 421
QG+D+IA +++G+G+T F + + + S ++ +ALILAPTRELA+Q+ ++
Sbjct: 37 QGKDIIASSKTGSGKTFAFLVPAINRLMAQKALSRQDPRALILAPTRELAKQVFIEAKSM 96
Query: 422 GDHLNAKCHACIGGTNVREDIRQLEXGVH 508
LN C +GG N + ++ L H
Sbjct: 97 CTGLNLTCSLIVGGENYNDQVKALRRNPH 125
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 57.2 bits (132), Expect = 2e-07
Identities = 36/87 (41%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLI--DTSIRECQ---ALILAPTRELAQQIQKVVIAL 421
GRD++ AQ+G+G+T + L I +R AL+LAPTRELAQQIQ+V
Sbjct: 159 GRDMVGIAQTGSGKTLAYIAPALVHITHQDQLRRGDGPIALVLAPTRELAQQIQQVATDF 218
Query: 422 GDHLNAKCHACIGGTNVREDIRQLEXG 502
G +NA GG IR LE G
Sbjct: 219 GQRINANNTCVFGGAPKGPQIRDLERG 245
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 57.2 bits (132), Expect = 2e-07
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQ 397
G+DV QAQ+GTG+TA F I I++ +D + QAL+L+PTRELA Q
Sbjct: 42 GKDVTGQAQTGTGKTAAFGIPIIERLDPDNKNVQALVLSPTRELAIQ 88
Score = 32.3 bits (70), Expect = 7.5
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +3
Query: 147 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIKD 260
+TF + + EELL+ I GFE+P+ IQ AI P I D
Sbjct: 5 KTFAEFAISEELLQAIGDMGFEEPTPIQAMAI-PQILD 41
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 57.2 bits (132), Expect = 2e-07
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 6/90 (6%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISIL-QLIDTSI-----RECQALILAPTRELAQQIQKVVI 415
+GRD+I +A++GTG+T F I I+ ++I + R L+LAPTRELA+Q++K
Sbjct: 140 EGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKHGRGRNPLCLVLAPTRELARQVEKEFR 199
Query: 416 ALGDHLNAKCHACIGGTNVREDIRQLEXGV 505
L+ C GGT + + +RQL+ GV
Sbjct: 200 ESAPSLDTIC--LYGGTPIGQQMRQLDYGV 227
>UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 598
Score = 56.8 bits (131), Expect = 3e-07
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQL----IDTSIREC-QALILAPTRELAQQIQKVVIA 418
+ D+ +AQ+G+G+T F + I + + T+ + C AL++APTRELA+QI ++ +
Sbjct: 45 KNHDLAVEAQTGSGKTLAFLLPIFNVLIKQVKTANKNCVYALVIAPTRELAKQIHEIAVQ 104
Query: 419 LGDHL---NAKCHACIGGTNVREDIRQLE 496
L HL CIGG + + D+ ++
Sbjct: 105 LASHLENNQFSIQLCIGGVSTKIDVSNIQ 133
>UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=19; Vibrio cholerae|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 428
Score = 56.8 bits (131), Expect = 3e-07
Identities = 30/78 (38%), Positives = 46/78 (58%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
A+ G+DV A A +G+G+T + + +L+ + TS E QAL+L PTRELA Q+ +V+ +G
Sbjct: 55 AMLTGKDVFALANTGSGKTLAYGLPLLERLKTS-PEQQALVLVPTRELAMQVSEVLTHVG 113
Query: 425 DHLNAKCHACIGGTNVRE 478
L GG + E
Sbjct: 114 TALGLNTLCLCGGVDKTE 131
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 56.8 bits (131), Expect = 3e-07
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLI-----DTSIRECQALILAPTRELAQQIQKVVIA 418
+G+D++ AQ+G+G+TA FS+ ILQ I + +ALILAPTRELA QI++ +
Sbjct: 123 EGQDILGIAQTGSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTIRN 182
Query: 419 LGDHLNAKCHACIGGTNVREDIRQLEXGV 505
+ + +GG + I+++ G+
Sbjct: 183 VSKSAHISTALVLGGVSKLSQIKRIAPGI 211
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 56.8 bits (131), Expect = 3e-07
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQ-LIDTS--IRECQALILAPTRELAQQIQKVVIALGDH 430
+DV+A A +GTG+TA F + LQ L+D R+ + LILAPTRELA QI KVV LG H
Sbjct: 39 KDVLAGAATGTGKTAAFVLPALQFLLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAH 98
Query: 431 LNAKCHACIGG 463
+ + GG
Sbjct: 99 CPFESNVVTGG 109
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 56.8 bits (131), Expect = 3e-07
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLID---TSIRECQALILAPTRELAQQIQKVVIALGD 427
GRDV+ AQ+GTG+TA+F++ ++ ++ R ++LIL PTRELA Q+ + + G
Sbjct: 260 GRDVLGCAQTGTGKTASFTLPMMDILSDRRARARMPRSLILEPTRELALQVAENFVKYGQ 319
Query: 428 HLNAKCHACIGGTNVREDIRQLEXGV 505
+L IGG ++ + L GV
Sbjct: 320 YLKLNHALLIGGESMNDQRDVLSKGV 345
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 56.8 bits (131), Expect = 3e-07
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRE---CQALILAPTRELAQQIQKVVIALG 424
+G+D++A AQ+GTG+TA+F++ +L+ + + +AL++ PTRELA Q+ +
Sbjct: 58 EGKDIMACAQTGTGKTASFALPVLEQLSKQPNDKPLLRALVMTPTRELAIQVCANIQKYS 117
Query: 425 DHLNAKCHACIGGTNVREDIRQLEXGV 505
L K A GG N+ + +E GV
Sbjct: 118 QFLPLKTLAVYGGANMNPQRKGVEQGV 144
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 56.8 bits (131), Expect = 3e-07
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 7/88 (7%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISIL-QLIDTS------IRECQALILAPTRELAQQIQKVV 412
+G+D I +AQ+GTG+TA F ISI+ QL T + E +ALI+APTREL QI K
Sbjct: 45 RGQDAIGRAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKDA 104
Query: 413 IALGDHLNAKCHACIGGTNVREDIRQLE 496
AL + + +GG + + ++ LE
Sbjct: 105 AALTKYTGLNVMSFVGGMDFDKQLKALE 132
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 56.8 bits (131), Expect = 3e-07
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRE--CQALILAPTRELAQQIQKVVIALGDH 430
G DV+A A++G+G+TA F I +L+ + + + +ALIL+PTR+LA+Q K LG
Sbjct: 65 GVDVVAMARTGSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKF 124
Query: 431 LNAKCHACIGGTNVREDIRQLEXG 502
+ + +GG ++ + +L G
Sbjct: 125 TDLRVSLLVGGDSMEDQFEELTKG 148
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 56.8 bits (131), Expect = 3e-07
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLI----DTSIRECQ-ALILAPTRELAQQIQKV 409
A+ GRDVI A++G+G+T F + +L+ + S E A++++PTRELA QI K
Sbjct: 436 AIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELASQIYKE 495
Query: 410 VIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
LN + C+GG+++ EDI ++ G
Sbjct: 496 CQPFLKVLNIRASCCVGGSSISEDIAAMKKG 526
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 56.4 bits (130), Expect = 4e-07
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISIL----QLIDTSIRECQALILAPTRELAQQIQKVVI 415
+ G DVIAQA++GTG+T +F + ++ Q S R+ L LAPTRELA+QI +
Sbjct: 136 IDDGFDVIAQARTGTGKTLSFVLPLVEKWQQFPQKSGRQPIILALAPTRELAKQISEYFE 195
Query: 416 ALGDHLNAKCHACIGGTN 469
A+G HL+ C GGT+
Sbjct: 196 AIGPHLSTTC--IYGGTS 211
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 56.4 bits (130), Expect = 4e-07
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Frame = +2
Query: 230 ATRNNALHQGRDVIAQAQSGTGQTATFSISILQLID---TSIRECQALILAPTRELAQQI 400
AT +AL G+D++ + ++G+G+T +F + L + T + +A+IL PTRELA Q+
Sbjct: 90 ATIPDAL-AGKDILGRGRTGSGKTLSFGLPTLATLAGGRTEKHKPRAVILTPTRELAMQV 148
Query: 401 QKVVIALGDHLNAKCHACIGGTNVREDIRQLEXGV 505
+ GD L K GGT++ I LE GV
Sbjct: 149 ADALQPYGDVLGLKMKVVCGGTSMGNQIYALERGV 183
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 56.4 bits (130), Expect = 4e-07
Identities = 30/81 (37%), Positives = 45/81 (55%)
Frame = +2
Query: 263 DVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 442
D+I +++G+G+TA F +SILQL + Q LIL P RELA Q+ + + +L K
Sbjct: 42 DLIVMSKTGSGKTAVFGVSILQLTNPEEAGPQGLILTPARELAVQVDNDIRKMAKYLKHK 101
Query: 443 CHACIGGTNVREDIRQLEXGV 505
A G N+ + + L GV
Sbjct: 102 TTAIYGQHNINLETQILNKGV 122
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 56.4 bits (130), Expect = 4e-07
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIAL 421
G DVIAQA+SGTG+T TF + L+ +D R QAL LAPTRE A Q + + +
Sbjct: 74 GCDVIAQAKSGTGKTMTFVVIALERVDAGRRRTQALALAPTRECAVQTHECFVEM 128
>UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia ATCC
50803|Rep: GLP_397_1016_18 - Giardia lamblia ATCC 50803
Length = 332
Score = 56.4 bits (130), Expect = 4e-07
Identities = 32/85 (37%), Positives = 48/85 (56%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
QGRD A++G+G+T F++ ILQ + AL+L PTRELA QI++ + A G+ L
Sbjct: 97 QGRDFCGIARTGSGKTLCFALPILQELSQDPYGIFALVLTPTRELALQIEQQMNAYGNPL 156
Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
+ + IGG + E L+ H
Sbjct: 157 GIQAQSLIGGKDSVEQSAILDSRPH 181
>UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 441
Score = 56.4 bits (130), Expect = 4e-07
Identities = 30/84 (35%), Positives = 45/84 (53%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
G + I +Q+GTG+TA F++ I+ + AL+++PTRELAQQI + G +N
Sbjct: 40 GHNCIVISQTGTGKTAAFALPIISTLSKDPYGIYALVISPTRELAQQICQQFKIFGRGMN 99
Query: 437 AKCHACIGGTNVREDIRQLEXGVH 508
A IGG + + LE H
Sbjct: 100 ADICPIIGGLAITDQASALEKNPH 123
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 56.4 bits (130), Expect = 4e-07
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = +2
Query: 242 NALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIAL 421
NAL G +I QA++GTG+TA F +++L I+T + + L++ TRELAQQ + + L
Sbjct: 106 NAL-LGEQLICQAKAGTGKTAVFVLTVLNTINTESNKVECLVITHTRELAQQARDEFLRL 164
Query: 422 GDHLNAKCHACI--GGTNVREDIRQLE 496
G + + C GG V +I+ +E
Sbjct: 165 GKFMKSVKVECFYGGGEPVSVNIQTIE 191
Score = 33.1 bits (72), Expect = 4.3
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 144 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
V F + LKEELLR + GFE P+ +Q ++
Sbjct: 72 VSQFKNFGLKEELLRAVKEAGFEHPTRVQAESL 104
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 56.0 bits (129), Expect = 5e-07
Identities = 26/85 (30%), Positives = 50/85 (58%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
Q +D++ ++Q+G+G+TA+F I + ++++ + QAL+L PTRELA Q+++ + +G
Sbjct: 40 QKKDLVVKSQTGSGKTASFGIPLCEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFK 99
Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
K A G + +L+ H
Sbjct: 100 RIKAAAIYGKSPFARQKLELKQKTH 124
>UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;
n=1; uncultured marine bacterium 66A03|Rep: Putative
cold-shock dead-box protein A - uncultured marine
bacterium 66A03
Length = 659
Score = 56.0 bits (129), Expect = 5e-07
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Frame = +2
Query: 263 DVIAQAQSGTGQTATFSISILQLIDTSIRECQ------ALILAPTRELAQQIQKVVIALG 424
D++ AQ+G+G+T F ISI + E A+I+APTRELA Q++K + L
Sbjct: 39 DLLVSAQTGSGKTLAFGISIATTLLAEKMEFDRPKIPLAIIIAPTRELALQVRKELEWLY 98
Query: 425 DHLNAKCHACIGGTNVREDIRQLEXGVH 508
A+ +C+GG + R + R LE G H
Sbjct: 99 VRTKAQFASCVGGMDPRAERRTLESGAH 126
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 56.0 bits (129), Expect = 5e-07
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
QG+D + +A++GTG+TA F+I LQ + ++ Q LIL P REL +QI + I LG L
Sbjct: 41 QGQDALVRAKTGTGKTAAFAIPALQHLRAEVQHPQVLILTPGRELCKQISQEFIKLGKGL 100
Query: 434 -NAKCHACIGG 463
N + GG
Sbjct: 101 ENFRVAEVTGG 111
Score = 33.9 bits (74), Expect = 2.5
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +3
Query: 153 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI--KDAMLSLK 278
F D+ LK+ +L IY G++KP+ IQ +++ + +DA++ K
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAK 50
>UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2;
Plasmodium chabaudi|Rep: DEAD-box RNA helicase, putative
- Plasmodium chabaudi
Length = 374
Score = 56.0 bits (129), Expect = 5e-07
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L R++IAQ+Q+G+G+T TF I++L I+ ++ QA+ + PTRELAQQ VV
Sbjct: 259 LDSNRNLIAQSQNGSGKTLTFVIAMLSKINRALYSLQAVCICPTRELAQQNYDVVGKFTK 318
Query: 428 HLNAK 442
+LN +
Sbjct: 319 YLNVR 323
>UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n=3;
Leishmania|Rep: ATP-dependent RNA helicase, putative -
Leishmania major
Length = 625
Score = 56.0 bits (129), Expect = 5e-07
Identities = 31/88 (35%), Positives = 45/88 (51%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
A+ GR V+ A +G+G+TA F++ ILQ + AL+L P+RELA QI IA G
Sbjct: 35 AILAGRHVVGGAATGSGKTAAFALPILQTLAADAYGVFALVLTPSRELAYQIIDQFIAFG 94
Query: 425 DHLNAKCHACIGGTNVREDIRQLEXGVH 508
L + +GG + L+ H
Sbjct: 95 APLRVRTMLAVGGVPTETQVDALKARPH 122
>UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5;
Trypanosomatidae|Rep: DEAD box RNA helicase, putative -
Leishmania major
Length = 657
Score = 56.0 bits (129), Expect = 5e-07
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTS----IRECQALILAPTRELAQQIQKVVIAL 421
QGRD++A+A++G G+T F I I++++ S A+I+ PTREL QI+ V++ L
Sbjct: 199 QGRDLLAEAKTGAGKTLAFLIPIVEIVCRSGFRPSNGTAAIIIGPTRELCLQIEGVLLKL 258
Query: 422 GDHLNAKCH--ACIGGTNVREDIRQLEXGV 505
H N CIGG + ++ +L G+
Sbjct: 259 LKHFNGSLTFLCCIGGQSRNQEGFKLANGI 288
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 56.0 bits (129), Expect = 5e-07
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLID--------TSIRECQALILAPTRELAQQIQKV 409
Q RD+I A++G+G+TA+F I +L I T QALIL PTRELAQQI+
Sbjct: 303 QNRDLIGIAETGSGKTASFLIPLLAYISKLPKLDEHTKALGPQALILVPTRELAQQIETE 362
Query: 410 VIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
L +C + +GG ++ + L G
Sbjct: 363 TNKFAGRLGLRCVSIVGGRDMNDQAYALRDG 393
>UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 617
Score = 56.0 bits (129), Expect = 5e-07
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 18/103 (17%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLI---DTSIREC--------------QALILAPTR 382
+G+D++AQA++GTG+T F I ++Q I D S++E +A+I++PTR
Sbjct: 14 KGKDLVAQAKTGTGKTLAFLIPVIQKILDADPSLKEVSRGRPRRFAQRQSIKAIIISPTR 73
Query: 383 ELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE-XGVH 508
ELA+QI K L +GGT RE +R++ G H
Sbjct: 74 ELAEQIGKEATRLCQRNGVTVQTAVGGTGKRESLRRIHMEGCH 116
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 56.0 bits (129), Expect = 5e-07
Identities = 29/83 (34%), Positives = 46/83 (55%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
QG D++ QAQ+GTG+T F I +++ + + Q+LILAPTRELA Q+ + +
Sbjct: 38 QGIDILGQAQTGTGKTGAFGIPLIEKV-VGKQGVQSLILAPTRELAMQVAEQLREFSRGQ 96
Query: 434 NAKCHACIGGTNVREDIRQLEXG 502
+ GG + I+ L+ G
Sbjct: 97 GVQVVTVFGGMPIERQIKALKKG 119
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 56.0 bits (129), Expect = 5e-07
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLI---DTSIRECQALILAPTRELAQQIQKVVIALGD 427
GRD+ A A +G+G+TA F++ L+ + + + LIL PTRELA QI ++ L
Sbjct: 204 GRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQ 263
Query: 428 HLNAKCHACIGGTNVRE 478
+ KC +GG +VRE
Sbjct: 264 FTDIKCGLIVGGLSVRE 280
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 55.6 bits (128), Expect = 7e-07
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRE--CQALILAPTRELAQQIQKVVIALGDH 430
GRDV+A A++G+G+TA F I + + + T + +ALIL+PTRELA Q Q+ + +G
Sbjct: 75 GRDVVAMARTGSGKTACFLIPMFEKLKTRQAKTGARALILSPTRELALQTQRFIKEIGRF 134
Query: 431 LNAKCHACIGGTNV 472
K +GG ++
Sbjct: 135 TGLKSSVILGGDSM 148
>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase;
n=1; Desulfotalea psychrophila|Rep: Related to
ATP-dependent RNA helicase - Desulfotalea psychrophila
Length = 498
Score = 55.6 bits (128), Expect = 7e-07
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Frame = +2
Query: 218 FCNPATRNN--ALHQGRDVIAQAQSGTGQTATFSISILQ--LIDTS----IRECQALILA 373
+C P + A+ G+D+I +A +GTG+TA F + ++ L D R +ALILA
Sbjct: 116 YCTPIQEQSLEAVLAGKDLIGKANTGTGKTAVFLVGVMARLLADKKGGLGKRTPRALILA 175
Query: 374 PTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
PTREL QI K LG + A GG + + L+ G
Sbjct: 176 PTRELVMQIVKDAKKLGRYTGVNADAVYGGAEYEKQMELLKRG 218
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 55.6 bits (128), Expect = 7e-07
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLID--TSI-RECQALILAPTRELAQQIQKVVIALG 424
QGRD++ AQ+G+G+TA F I +L + TS + +ALIL PTRELAQQ+ V
Sbjct: 80 QGRDLLLSAQTGSGKTAAFVIPVLDRLSRATSFDKLTKALILTPTRELAQQVHDSVRTYS 139
Query: 425 -DHLNAKCHACIGGTNVREDIRQLEXGV 505
D C +GG I L+ GV
Sbjct: 140 KDMRGLFCVPLVGGAPYNGQITALKKGV 167
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 55.6 bits (128), Expect = 7e-07
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 439
+D+I ++ +GTG+T F + ILQ ++T +++ QA+IL PT ELA QI + V +L
Sbjct: 39 QDIIGKSHTGTGKTVAFIVPILQNLNTHLKQPQAIILCPTHELASQIIEQVRKFATYLEG 98
Query: 440 KCHACI-GGTNVREDIRQL 493
I GG++++ I L
Sbjct: 99 VNATLICGGSHIQRQIYAL 117
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 55.6 bits (128), Expect = 7e-07
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 433
G D++ QA+SGTG+T F++ I + + + Q+L + PTRE+A QI+ V+ +G +
Sbjct: 59 GLDLLVQAKSGTGKTLVFTVLITENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVP 118
Query: 434 NAKCHACIGGTNVREDIRQLE 496
N + + IGG ++ +D + L+
Sbjct: 119 NFRAKSFIGGLDISQDRKNLQ 139
Score = 34.3 bits (75), Expect = 1.9
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +3
Query: 111 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
P T D ++D ++ F M L E +LRG+ F PS IQ RAI
Sbjct: 11 PRTADVEFDLSLQ-FSKMFLSEPVLRGLTRNNFTHPSPIQARAI 53
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 55.6 bits (128), Expect = 7e-07
Identities = 26/65 (40%), Positives = 42/65 (64%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 439
+D+IAQA +G+G+T F + +L +D + + QA+ + PTRELAQQ + V++ +G
Sbjct: 141 KDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGKFTGI 200
Query: 440 KCHAC 454
C AC
Sbjct: 201 TC-AC 204
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 55.6 bits (128), Expect = 7e-07
Identities = 28/83 (33%), Positives = 53/83 (63%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGD 427
L+ +++AQA++G+G+TA+F+I +++L++ + +A+IL PTRELA Q+ + +L
Sbjct: 41 LNDEYNIVAQARTGSGKTASFAIPLIELVNEN-NGIEAIILTPTRELAIQVADEIESLKG 99
Query: 428 HLNAKCHACIGGTNVREDIRQLE 496
+ N K GG + I+ L+
Sbjct: 100 NKNLKIAKIYGGKAIYPQIKALK 122
Score = 32.7 bits (71), Expect = 5.7
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 153 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIKD 260
F+++NL + +L I GFEKP+ IQ + I + D
Sbjct: 8 FNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLND 43
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 55.6 bits (128), Expect = 7e-07
Identities = 27/55 (49%), Positives = 41/55 (74%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
R++IAQ+QSGTG+TA FS+++L ++ QA+ LAP+RELA+Q +VV +G
Sbjct: 132 RNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMG 186
Score = 43.6 bits (98), Expect = 0.003
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +3
Query: 147 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
++FD++ L ELL+GIYA F+KPS IQ+RA+
Sbjct: 92 KSFDELGLAPELLKGIYAMKFQKPSKIQERAL 123
>UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA
helicase - Bacillus halodurans
Length = 389
Score = 55.2 bits (127), Expect = 9e-07
Identities = 28/80 (35%), Positives = 47/80 (58%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
G+++I +Q+GTG+T + + +L + + QALILAPT+ELA QI +V L +
Sbjct: 39 GQNLIVHSQTGTGKTLAYLLPMLTKTEELPEQTQALILAPTQELAMQIVEVAKQLTATTS 98
Query: 437 AKCHACIGGTNVREDIRQLE 496
IGG N++ + +L+
Sbjct: 99 ITVLPLIGGANIKRQVEKLK 118
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 55.2 bits (127), Expect = 9e-07
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
A+ G DV A+A++G+G+TA F I +L I S QAL+L PTRELA Q+ K + L
Sbjct: 37 AVLSGADVRAKAKTGSGKTAAFGIGLLDRIVVSDFTTQALVLCPTRELADQVSKELRRLA 96
Query: 425 DHL-NAKCHACIGGTNVREDIRQLEXGVH 508
N K GG + + + L H
Sbjct: 97 RFAQNIKILTLCGGQPMGQQLDSLVHAPH 125
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 55.2 bits (127), Expect = 9e-07
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRE-----CQALILAPTRELAQQIQKVV 412
L +GRD++ AQ+GTG+TA+F++ +L + + R + L+LAPTREL QI
Sbjct: 41 LLEGRDLLGLAQTGTGKTASFALPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGF 100
Query: 413 IALGDHLNAKCHACIGGTNVREDIRQLEXGV 505
+ H + GG + ++ LE GV
Sbjct: 101 ESFSRHQPVRVTTIFGGVSQVHQVKALEEGV 131
>UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinekea
sp. MED297|Rep: ATP-dependent RNA helicase - Reinekea
sp. MED297
Length = 534
Score = 55.2 bits (127), Expect = 9e-07
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISIL------QLIDTSIRECQALILAPTRELAQQIQKVVIA 418
G D I +AQ+GTG+TA F I+ + +L + + E +ALILAPTRELA QI + A
Sbjct: 64 GHDCIGKAQTGTGKTAAFLITAITDLLEHRLEEQYVGEPRALILAPTRELALQIAEDAKA 123
Query: 419 LGDHLNAKCHACIGGTNVREDIRQL 493
L + K A +GG + + +QL
Sbjct: 124 LTKYSRLKVAAVVGGMDFDKQKQQL 148
>UniRef50_A3J7I3 Cluster: ATP-independent RNA helicase; n=5;
Bacteroidetes|Rep: ATP-independent RNA helicase -
Flavobacteria bacterium BAL38
Length = 463
Score = 55.2 bits (127), Expect = 9e-07
Identities = 25/84 (29%), Positives = 50/84 (59%)
Frame = +2
Query: 242 NALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIAL 421
+A+ + +++ + +G+G+T F + I Q+++ ++ Q LIL P+REL QI++V +
Sbjct: 28 SAILKENNILLLSPTGSGKTLAFLLPIFQMMEEEVKGVQCLILVPSRELGLQIEQVWKKM 87
Query: 422 GDHLNAKCHACIGGTNVREDIRQL 493
G H K + C GG ++ + + L
Sbjct: 88 GTHF--KVNTCYGGHSIETEFKNL 109
>UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL'
isoform 5; n=2; Nicotiana tabacum|Rep: Putative
chloroplast RNA helicase VDL' isoform 5 - Nicotiana
tabacum (Common tobacco)
Length = 390
Score = 55.2 bits (127), Expect = 9e-07
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIAL 421
L+ GRD + AQ+G+G+T + + +L +ID+ QALI+ PTREL Q+ KV L
Sbjct: 101 LYSGRDCVLHAQTGSGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTL 158
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 55.2 bits (127), Expect = 9e-07
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTS--IRECQALILAPTRELAQQIQKVVIALGD 427
+GRDV+A A++G+G+TA F I + + + + +ALIL+PTRELA Q K + LG
Sbjct: 75 EGRDVVAMAKTGSGKTACFLIPLFEKLQRREPTKGARALILSPTRELAVQTYKFIKELGR 134
Query: 428 HLNAKCHACIGGTNV 472
+ K +GG ++
Sbjct: 135 FMELKSILVLGGDSM 149
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,771,956
Number of Sequences: 1657284
Number of extensions: 12811114
Number of successful extensions: 38683
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 36078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38052
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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