Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0254
(546 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 39 3e-05
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.57
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.57
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.57
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.57
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 24 0.76
DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory pro... 23 1.7
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 23 1.7
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 23 1.7
AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical pro... 23 1.7
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 23 2.3
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 4.0
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 21 5.3
AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase l... 21 5.3
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 21 7.0
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 7.0
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 21 9.3
DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory pro... 21 9.3
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 9.3
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 21 9.3
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 38.7 bits (86), Expect = 3e-05
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLI---------DTSIRECQALILAPTRELAQQIQKV 409
GRD+++ AQ+G+G+TA F + I+ + + + + +I++PTRELA QI
Sbjct: 195 GRDLMSCAQTGSGKTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQIADQ 254
Query: 410 VIALGDHLNAKCHACIGGTNVREDIRQLEXGVH 508
+ K GGT+ ++ G H
Sbjct: 255 GKKFAYNSTVKVAVIYGGTSTNHQRGRILGGCH 287
Score = 28.7 bits (61), Expect = 0.035
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 144 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
+ +F+ L+ LL + G+ KP+AIQ+ AI
Sbjct: 157 ITSFETSGLRPHLLENVKKSGYTKPTAIQKYAI 189
Score = 22.6 bits (46), Expect = 2.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 502 CSLVVGTPGRVYDMI 546
C ++V TPGR+ D +
Sbjct: 286 CHILVATPGRLKDFV 300
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.57
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 316 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 420
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.57
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 316 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 420
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.57
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 316 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 420
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.57
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 316 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 420
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 24.2 bits (50), Expect = 0.76
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -3
Query: 493 QLANIFTDIGATNASMAFSIQVITKSYHHLLNLLGQLSCGSQDQSLTF 350
Q+AN TD + S+A S +++ H L + + G+Q +F
Sbjct: 207 QMANYSTDYSSLTHSLAASNHLLSSGQHLLQDTYKSMLPGAQTVGASF 254
>DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory
protein 12 protein.
Length = 127
Score = 23.0 bits (47), Expect = 1.7
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +1
Query: 457 WWHQCP*RYSPTGXW 501
WW++ +Y PTG +
Sbjct: 98 WWNELEAKYDPTGIY 112
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 23.0 bits (47), Expect = 1.7
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 367 PGSHKRAGPTNSEGGDSSW 423
PG+ K+ GP + +SW
Sbjct: 28 PGAKKKVGPIDQSAAAASW 46
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 23.0 bits (47), Expect = 1.7
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 367 PGSHKRAGPTNSEGGDSSW 423
PG+ K+ GP + +SW
Sbjct: 28 PGAKKKVGPIDQSAAAASW 46
>AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical
protein protein.
Length = 127
Score = 23.0 bits (47), Expect = 1.7
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +1
Query: 457 WWHQCP*RYSPTGXW 501
WW++ +Y PTG +
Sbjct: 98 WWNELEAKYDPTGIY 112
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 22.6 bits (46), Expect = 2.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 401 QKVVIALGDHLNAKCHAC 454
+K IAL D N CH C
Sbjct: 261 EKSWIALNDDYNRLCHLC 278
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.8 bits (44), Expect = 4.0
Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 7/55 (12%)
Frame = +3
Query: 9 MSYSSERRSEDWP-----EDSKNGPSKDQGSYDGP--PGMDPGTLDTDWDQVVET 152
+ ++ ER+ DWP E+ K G S+ P P P + W T
Sbjct: 1135 LHWNKERKICDWPKSAKCEEKKPGHKPSTSSWQKPTKPSYRPPSTTNHWQTKTTT 1189
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 21.4 bits (43), Expect = 5.3
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 105 FPEVHRNYLDPSMAHFW 55
F +V R+Y DP ++W
Sbjct: 141 FVKVPRHYDDPGKGNYW 157
>AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase like
protein E1 protein.
Length = 139
Score = 21.4 bits (43), Expect = 5.3
Identities = 9/37 (24%), Positives = 20/37 (54%)
Frame = -2
Query: 176 FFEVHVIEGFDNLIPVGVKCPRVHSRRSIVTTLILRW 66
FF+ ++I G +N + + V + + + +T +L W
Sbjct: 43 FFKKNLIVGSENCLVLNVYTKNLRTDTNRITQPVLFW 79
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 21.0 bits (42), Expect = 7.0
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 79 KVVTMDLREWTLGHLT 126
KV T LR W HLT
Sbjct: 187 KVATNILRAWLFQHLT 202
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 21.0 bits (42), Expect = 7.0
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 79 KVVTMDLREWTLGHLT 126
KV T LR W HLT
Sbjct: 343 KVATNILRAWLFQHLT 358
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 20.6 bits (41), Expect = 9.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -2
Query: 506 EHXSPVGEYLHGHW 465
E+ +P+G Y H W
Sbjct: 415 ENRAPLGLYFHAAW 428
>DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory
protein 17 protein.
Length = 124
Score = 20.6 bits (41), Expect = 9.3
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = +1
Query: 457 WWHQCP*RYSPTGXWCS 507
WW + +Y P G + S
Sbjct: 96 WWQELQEKYDPKGEYKS 112
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 20.6 bits (41), Expect = 9.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 73 RIKVVTMDLREWTLGHLTPTGIKLSKP 153
R V DLR T G L T +SKP
Sbjct: 361 RSPVTPADLRLLTRGRLVLTVSSVSKP 387
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 20.6 bits (41), Expect = 9.3
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -2
Query: 266 HRVLDARHYCALLDCRRFFKTIGVYASQ 183
H + ++H C++ R K GVY+ +
Sbjct: 77 HPLSGSKHLCSICGDRASGKHYGVYSCE 104
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,870
Number of Sequences: 336
Number of extensions: 3189
Number of successful extensions: 23
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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