Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0254
(546 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 138 2e-33
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 138 2e-33
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 118 3e-27
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 118 3e-27
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 77 6e-15
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 66 1e-11
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 66 1e-11
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 61 4e-10
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 61 4e-10
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 61 4e-10
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 58 3e-09
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 58 3e-09
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 57 1e-08
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 54 7e-08
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 53 1e-07
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 53 1e-07
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 52 2e-07
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 52 2e-07
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 49 2e-06
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 49 2e-06
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 49 3e-06
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 48 3e-06
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 47 8e-06
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 46 1e-05
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 45 4e-05
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 44 9e-05
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 44 9e-05
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 44 9e-05
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 44 9e-05
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 44 9e-05
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 44 9e-05
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 43 1e-04
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 42 2e-04
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 42 2e-04
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 42 2e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 40 0.001
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 38 0.004
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 38 0.005
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 38 0.005
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 37 0.011
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 36 0.019
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 36 0.019
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 36 0.019
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 36 0.025
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 33 0.10
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.18
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 31 0.41
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 30 0.95
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 29 2.2
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 2.9
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 28 5.0
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 27 6.7
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 27 6.7
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 27 8.8
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 138 bits (334), Expect = 2e-33
Identities = 64/88 (72%), Positives = 78/88 (88%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
A+ + RDVIAQAQSGTG+TATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALG
Sbjct: 59 AILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALG 118
Query: 425 DHLNAKCHACIGGTNVREDIRQLEXGVH 508
D++N +CHACIGGTN+ EDIR+L+ G H
Sbjct: 119 DYMNVQCHACIGGTNLGEDIRKLDYGQH 146
Score = 63.3 bits (147), Expect = 1e-10
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +3
Query: 141 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 257
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+ +K
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILK 62
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 138 bits (334), Expect = 2e-33
Identities = 64/88 (72%), Positives = 78/88 (88%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
A+ + RDVIAQAQSGTG+TATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALG
Sbjct: 59 AILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALG 118
Query: 425 DHLNAKCHACIGGTNVREDIRQLEXGVH 508
D++N +CHACIGGTN+ EDIR+L+ G H
Sbjct: 119 DYMNVQCHACIGGTNLGEDIRKLDYGQH 146
Score = 63.3 bits (147), Expect = 1e-10
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +3
Query: 141 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 257
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI +K
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILK 62
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 118 bits (284), Expect = 3e-27
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
G+DVIAQAQSGTG+TATFS+SILQ ID QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125
Query: 437 AKCHACIGGTNVREDIRQLEXGVH 508
CIGGT+VR+D R+LE G+H
Sbjct: 126 VNILPCIGGTSVRDDQRKLEAGIH 149
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/46 (73%), Positives = 42/46 (91%)
Frame = +3
Query: 114 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC 251
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPC 63
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 118 bits (284), Expect = 3e-27
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
G+DVIAQAQSGTG+TATFS+SILQ ID QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125
Query: 437 AKCHACIGGTNVREDIRQLEXGVH 508
CIGGT+VR+D R+LE G+H
Sbjct: 126 VNILPCIGGTSVRDDQRKLEAGIH 149
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/46 (73%), Positives = 42/46 (91%)
Frame = +3
Query: 114 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC 251
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPC 63
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 77.4 bits (182), Expect = 6e-15
Identities = 31/84 (36%), Positives = 56/84 (66%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
G+D++A+A++GTG+T + I +++ I +++ QA+++ PTRELA Q ++ + L H+
Sbjct: 80 GQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKHIQ 139
Query: 437 AKCHACIGGTNVREDIRQLEXGVH 508
K GGT++R+DI +L VH
Sbjct: 140 LKVMVTTGGTDLRDDIMRLNGTVH 163
Score = 33.9 bits (74), Expect = 0.077
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 153 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
F+D L +LL GI+ G+EKPS IQ+ +I
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASI 74
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 66.5 bits (155), Expect = 1e-11
Identities = 34/85 (40%), Positives = 48/85 (56%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+G D++ A++GTG+T F+I ILQ + ALIL PTRELA QI + ALG +
Sbjct: 125 EGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPI 184
Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
KC +GG ++ R+L H
Sbjct: 185 TLKCSVIVGGRSLIHQARELSERPH 209
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 66.5 bits (155), Expect = 1e-11
Identities = 34/85 (40%), Positives = 48/85 (56%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
+G D++ A++GTG+T F+I ILQ + ALIL PTRELA QI + ALG +
Sbjct: 125 EGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPI 184
Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
KC +GG ++ R+L H
Sbjct: 185 TLKCSVIVGGRSLIHQARELSERPH 209
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 61.3 bits (142), Expect = 4e-10
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = +2
Query: 263 DVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 439
++IAQAQSGTG+TA F +++L ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 309
Query: 440 KCHACIGGTNV 472
K H I G N+
Sbjct: 310 KIHYAIKGGNM 320
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 61.3 bits (142), Expect = 4e-10
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = +2
Query: 263 DVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 439
++IAQAQSGTG+TA F +++L ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 334
Query: 440 KCHACIGGTNV 472
K H I G N+
Sbjct: 335 KIHYAIKGGNM 345
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 61.3 bits (142), Expect = 4e-10
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = +2
Query: 263 DVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 439
++IAQAQSGTG+TA F +++L ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 718
Query: 440 KCHACIGGTNV 472
K H I G N+
Sbjct: 719 KIHYAIKGGNM 729
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 58.4 bits (135), Expect = 3e-09
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDT-SIRECQALILAPTRELAQQIQKVVIALGDHL 433
G+DV+A +++G+G+TA F I +LQ + +AL+++PTRELA Q KVV LG
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFT 120
Query: 434 NAKCHACIGGTNVRE 478
+C +GG + E
Sbjct: 121 GLRCACLVGGDQIEE 135
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 58.4 bits (135), Expect = 3e-09
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDT-SIRECQALILAPTRELAQQIQKVVIALGDHL 433
G+DV+A +++G+G+TA F I +LQ + +AL+++PTRELA Q KVV LG
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFT 120
Query: 434 NAKCHACIGGTNVRE 478
+C +GG + E
Sbjct: 121 GLRCACLVGGDQIEE 135
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +3
Query: 162 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIKDAMLSLKPSQELDKLLLSL 314
M LKEELLRGIY +GFEKPSAIQ+ A+ PC ++++ K ++SL
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISL 51
Score = 52.4 bits (120), Expect = 2e-07
Identities = 28/75 (37%), Positives = 43/75 (57%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
G+DV Q+Q+G+G+T I ILQ ID Q ++LAP R +AQ+ + + +LG +LN
Sbjct: 33 GKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRAHEQLKSLGRNLN 92
Query: 437 AKCHACIGGTNVRED 481
C+G E+
Sbjct: 93 VNA-TCLGFDTTAEN 106
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 54.0 bits (124), Expect = 7e-08
Identities = 30/85 (35%), Positives = 45/85 (52%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
QG+DVI A++G+G+T F+I +LQ + + L+L PTRELA QI + ALG +
Sbjct: 80 QGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGI 139
Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
+GG ++ L H
Sbjct: 140 GLIAAVIVGGVDMAAQAMALARRPH 164
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 53.2 bits (122), Expect = 1e-07
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQA-----LILAPTRELAQQIQKVVIAL 421
GRD+I+ A++G+G+T F + L I + L+L PTRELAQQ+Q+V I
Sbjct: 166 GRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDF 225
Query: 422 GDHLNAKCHACIGGTNVREDIRQLEXGV 505
L K GG + R LE GV
Sbjct: 226 CHSLGLKMTCLFGGASKGPQARDLERGV 253
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 53.2 bits (122), Expect = 1e-07
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQ----------ALILAPTRELAQQIQ 403
Q RDVI A++G+G+TA F + +L I TS+ + + A+I+APTRELAQQI+
Sbjct: 337 QNRDVIGVAETGSGKTAAFLLPLLVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQIE 395
Query: 404 KVVIALGDHLNAKCHACIGGTNVREDIRQLEXGV 505
+ G L K + IGG + + +L GV
Sbjct: 396 EETNKFGKLLGIKTVSVIGGASREDQGMKLRMGV 429
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/70 (35%), Positives = 44/70 (62%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
GRD++ QA+SGTG+T FS+ ++ +D+ Q +I+ PTRE++ QI++ V +
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TG 117
Query: 437 AKCHACIGGT 466
A+ +GG+
Sbjct: 118 ARTSVYVGGS 127
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/70 (35%), Positives = 44/70 (62%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
GRD++ QA+SGTG+T FS+ ++ +D+ Q +I+ PTRE++ QI++ V +
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TG 117
Query: 437 AKCHACIGGT 466
A+ +GG+
Sbjct: 118 ARTSVYVGGS 127
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 433
G DV+ QA+SG G+TA F I+ LQ ++ E + + TRELA QI K +L
Sbjct: 78 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 137
Query: 434 NAKCHACIGGTNVREDIRQL 493
K GG +++D +L
Sbjct: 138 GVKVAVFFGGMAIKKDEERL 157
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 433
G DV+ QA+SG G+TA F I+ LQ ++ E + + TRELA QI K +L
Sbjct: 78 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 137
Query: 434 NAKCHACIGGTNVREDIRQL 493
K GG +++D +L
Sbjct: 138 GVKVAVFFGGMAIKKDEERL 157
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 433
G DV+ QA+SG G+TA F I+ LQ ++ E + + TRELA QI K +L
Sbjct: 77 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 136
Query: 434 NAKCHACIGGTNVREDIRQL 493
K GG +++D +L
Sbjct: 137 GVKVAVFFGGMAIKKDEERL 156
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLI--DTSIRECQ---ALILAPTRELAQQIQKV 409
++ GRDVI A++G+G+T F + + + I + E A+ILAPTRELA Q K
Sbjct: 337 SIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKE 396
Query: 410 VIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
L K GG + E I L+ G
Sbjct: 397 ANKFAKPLGLKVACTYGGVGISEQIADLKRG 427
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 48.4 bits (110), Expect = 3e-06
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQ--LIDTSIREC-QALILAPTRELAQQIQKVVIALGD 427
G+D+ A A +GTG+TA F + IL+ + C + L+L PTRELA Q+ +V L
Sbjct: 185 GKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLST 244
Query: 428 HLNAKCHACIGGTNVREDIRQLEXG 502
+ + C GG +++ L G
Sbjct: 245 FIQLEVCLCAGGLDLKAQEAALRSG 269
Score = 30.7 bits (66), Expect = 0.72
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +3
Query: 48 EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 221
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 222 AIQQRAI 242
IQQ I
Sbjct: 173 PIQQACI 179
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 47.2 bits (107), Expect = 8e-06
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Frame = +2
Query: 263 DVIAQAQSGTGQTATFSISILQLIDTSI---RECQALILAPTRELAQQIQKVVIALGDHL 433
DV+ ++ +G+G+T F + ++++I + + ALIL+P+REL QI V+ + L
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107
Query: 434 NAKCHACIGGTNVREDIRQLE 496
N GG V ++I+ +
Sbjct: 108 NLTVETVTGGQKVDKNIKMFK 128
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQ----ALILAPTRELAQQIQKVVIALG 424
G DV+ A++G+G+T I +L+ + + ALI++PTRELA Q + A+G
Sbjct: 113 GSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINAVG 172
Query: 425 DHLNAKCHACIGGTNV 472
H C IGG++V
Sbjct: 173 AHHGFSCGLVIGGSDV 188
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 44.8 bits (101), Expect = 4e-05
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISIL-----QLIDTSIRECQA---LILAPTRELAQQIQKVV 412
GRD+I A +G+G+T TF + ++ Q + + LI+ P+RELA+QI ++
Sbjct: 227 GRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLI 286
Query: 413 IALGDHL------NAKCHACIGGTNVREDIRQLEXGVH 508
I + D L + CIGG + E + + G+H
Sbjct: 287 IEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIH 324
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 43.6 bits (98), Expect = 9e-05
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISIL-QLIDTSIRE------C--QALILAPTRELAQQI 400
+HQG D++A AQ+G+G+TA F + I+ +LID + C + +IL PTRELA QI
Sbjct: 375 VHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
Query: 401 QKVVIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
+ GG V + Q+E G
Sbjct: 435 YNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKG 468
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 43.6 bits (98), Expect = 9e-05
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISIL-QLIDTSIRE------C--QALILAPTRELAQQI 400
+HQG D++A AQ+G+G+TA F + I+ +LID + C + +IL PTREL QI
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
Query: 401 QKVVIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
+ GG V + Q+E G
Sbjct: 646 YNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKG 679
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 43.6 bits (98), Expect = 9e-05
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISIL-QLIDTSIRE------C--QALILAPTRELAQQI 400
+HQG D++A AQ+G+G+TA F + I+ +LID + C + +IL PTREL QI
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
Query: 401 QKVVIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
+ GG V + Q+E G
Sbjct: 646 YNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKG 679
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 43.6 bits (98), Expect = 9e-05
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISIL-QLIDTSIRE------C--QALILAPTRELAQQI 400
+HQG D++A AQ+G+G+TA F + I+ +LID + C + +IL PTRELA QI
Sbjct: 375 VHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
Query: 401 QKVVIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
+ GG V + Q+E G
Sbjct: 435 YNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKG 468
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 43.6 bits (98), Expect = 9e-05
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISIL-QLIDTSIRE------C--QALILAPTRELAQQI 400
+HQG D++A AQ+G+G+TA F + I+ +LID + C + +IL PTRELA QI
Sbjct: 375 VHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
Query: 401 QKVVIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
+ GG V + Q+E G
Sbjct: 435 YNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKG 468
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 43.6 bits (98), Expect = 9e-05
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISIL-QLIDTSIRE------C--QALILAPTRELAQQI 400
+HQG D++A AQ+G+G+TA F + I+ +LID + C + +IL PTREL QI
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
Query: 401 QKVVIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
+ GG V + Q+E G
Sbjct: 646 YNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKG 679
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLID----TSIRECQALILAPTRELAQQIQKVVI 415
L +G+DV+A A++G+G+T F + ++L+ +I++PTREL+ Q V+
Sbjct: 102 LLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLS 161
Query: 416 ALGDHLNAKCHACIGGTNVREDIRQLEXGV 505
L + N +GG+N + +L GV
Sbjct: 162 ELLEGSNLTYGLVMGGSNRSAEKDKLAKGV 191
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 42.3 bits (95), Expect = 2e-04
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 16/99 (16%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLI------------DTSIRECQ---ALILAPTRELAQ 394
RD+++ AQ+G+G+TA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 236
Query: 395 QIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLEXGVH 508
QI K N + GG N R+ + +L G H
Sbjct: 237 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTH 275
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 42.3 bits (95), Expect = 2e-04
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 16/99 (16%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLI------------DTSIRECQ---ALILAPTRELAQ 394
RD+++ AQ+G+G+TA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 220
Query: 395 QIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLEXGVH 508
QI K N + GG N R+ + +L G H
Sbjct: 221 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTH 259
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 42.3 bits (95), Expect = 2e-04
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 16/99 (16%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLI------------DTSIRECQ---ALILAPTRELAQ 394
RD+++ AQ+G+G+TA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 217
Query: 395 QIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLEXGVH 508
QI K N + GG N R+ + +L G H
Sbjct: 218 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTH 256
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 40.7 bits (91), Expect = 7e-04
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISIL-QLIDTS----------IRECQALILAPTRELA 391
A+ +DV+ A++G+G+T F I ++ +L+++S +R +ALI+APTREL
Sbjct: 22 AVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELV 81
Query: 392 QQIQKVVIALGDHLNAKCHACIGG 463
QI K + AL + +GG
Sbjct: 82 IQIMKHINALISTTQLIATSIVGG 105
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 40.7 bits (91), Expect = 7e-04
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISIL-QLIDTS----------IRECQALILAPTRELA 391
A+ +DV+ A++G+G+T F I ++ +L+++S +R +ALI+APTREL
Sbjct: 189 AVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELV 248
Query: 392 QQIQKVVIALGDHLNAKCHACIGG 463
QI K + AL + +GG
Sbjct: 249 IQIMKHINALISTTQLIATSIVGG 272
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 10/62 (16%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQLI-----DTSIRECQ-----ALILAPTRELAQQIQK 406
G DV+ QA++ G+TA F + I+ I +T + Q ALILAPTRELA QI +
Sbjct: 418 GHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHE 477
Query: 407 VV 412
+
Sbjct: 478 AL 479
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 38.3 bits (85), Expect = 0.004
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 12/98 (12%)
Frame = +2
Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQ-----------ALILAPTRELAQ 394
L G+D I +Q+G+G+T F + L ID + + + L+L+PTRELAQ
Sbjct: 118 LLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQ 177
Query: 395 QIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLEXGV 505
QI+ V N C+ GG + E + GV
Sbjct: 178 QIEGEVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGV 213
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 37.9 bits (84), Expect = 0.005
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQ--LIDTSIR-----EC--QALILAPTRELAQQIQKV 409
G+D++A AQ+G+G+TA F + I+ +++ + C + +IL PTRELA QI
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNE 394
Query: 410 VIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
+ GG NV + Q+ G
Sbjct: 395 GRKFSYQSVMEIKPVYGGINVGYNKSQIMKG 425
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 37.9 bits (84), Expect = 0.005
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSISILQ--LIDTSIR-----EC--QALILAPTRELAQQIQKV 409
G+D++A AQ+G+G+TA F + I+ +++ + C + +IL PTRELA QI
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNE 394
Query: 410 VIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
+ GG NV + Q+ G
Sbjct: 395 GRKFSYQSVMEIKPVYGGINVGYNKSQIMKG 425
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 36.7 bits (81), Expect = 0.011
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Frame = +2
Query: 254 QGRDVIAQAQSGTGQTATFSISILQLI-------DTSIRECQALILAPTRELAQQIQKVV 412
+ ++++ +A++G+G+T F I ++Q + D S+ A+I+APT+EL QI K+
Sbjct: 125 ENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIYKLF 183
Query: 413 IALGDHL 433
+ L L
Sbjct: 184 VKLSQAL 190
Score = 30.3 bits (65), Expect = 0.95
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 111 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
P + D++ +TF D L E +L+ I G+EK + +Q+ I
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVI 120
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 35.9 bits (79), Expect = 0.019
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSIS-ILQLIDTSIRECQA---------LILAPTRELAQQIQK 406
G DV+A A +G+G+T F I +++L++ ++ LI+APTREL Q
Sbjct: 773 GNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFT 832
Query: 407 VVIALGDHLNAKCHACIGGTNVREDIRQL 493
L KC GG + +++ L
Sbjct: 833 TARQLTYETGLKCGLAFGGYSRNANVQHL 861
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 35.9 bits (79), Expect = 0.019
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATFSIS-ILQLIDTSIRECQA---------LILAPTRELAQQIQK 406
G DV+A A +G+G+T F I +++L++ ++ LI+APTREL Q
Sbjct: 773 GNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFT 832
Query: 407 VVIALGDHLNAKCHACIGGTNVREDIRQL 493
L KC GG + +++ L
Sbjct: 833 TARQLTYETGLKCGLAFGGYSRNANVQHL 861
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 35.9 bits (79), Expect = 0.019
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 17/105 (16%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSI----SILQ----LIDTSI-----RECQ---ALILAP 376
AL GRD+++ AQ+G+G+TA F + +ILQ + S+ R+ Q AL+L+P
Sbjct: 199 ALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSP 258
Query: 377 TRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLEXGVH 508
TREL+ QI GG N ++ I +L G H
Sbjct: 259 TRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCH 303
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 35.5 bits (78), Expect = 0.025
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +2
Query: 245 ALHQGRDVIA-QAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIAL 421
AL++ R ++ Q GTG+T T ++ + +LI ++ Q ++LAPTRE I+ +
Sbjct: 77 ALNENRKLVCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKT 133
Query: 422 GDHLNAKCHA-CIGGTNVREDI 484
+ K H + TN D+
Sbjct: 134 LKRMGIKVHEHALMDTNEYRDV 155
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 33.5 bits (73), Expect = 0.10
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Frame = +2
Query: 257 GRDVIAQAQSGTGQTATF----SISILQLIDTSIRECQ-ALILAPTRELAQQI 400
GRDV+ A++G+G+TA + + I+ D E A+I+ PTRELA Q+
Sbjct: 302 GRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQV 354
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 32.7 bits (71), Expect = 0.18
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLIDTS-IRECQALILAPTRELAQQIQKVVIALGDHLN 436
RDV A +G+G+T + + +L + + + QA+IL P + L QI D
Sbjct: 157 RDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLVAQIVDEFKRWNDESG 216
Query: 437 -AKCHACIGGTNVREDIRQL 493
AK + G + ++ RQL
Sbjct: 217 VAKVVSLSGANDFEKEARQL 236
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 31.5 bits (68), Expect = 0.41
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 108 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 10
P P + + D FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 30.3 bits (65), Expect = 0.95
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 10/56 (17%)
Frame = +2
Query: 260 RDVIAQAQSGTGQTATFSISILQLI----------DTSIRECQALILAPTRELAQQ 397
R+V+A A +G+G+T F++ ++ I ++ + A++L PTRELA Q
Sbjct: 164 RNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLI 334
A+ G D + A++G+G+T FS+ I Q++
Sbjct: 35 AILGGADALIAAETGSGKTGAFSLPIAQIV 64
Score = 28.7 bits (61), Expect = 2.9
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 502 CSLVVGTPGRVYDMI 546
C +VVGTP RV+D+I
Sbjct: 335 CDIVVGTPSRVFDLI 349
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 78 DPSMAHFWNPLANLLTFFQTNKT 10
D FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +3
Query: 21 SERRSEDWPEDSKNGPSKD-QG-SYDGPPGMDPGTLDTDWDQVVETFDD 161
SER +W +D ++GP ++ QG + + PG D T+D W + VE +D+
Sbjct: 63 SERVKANWVDD-RDGPIRNIQGHASETFPGKD--TVDKVWRKCVELYDE 108
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 27.5 bits (58), Expect = 6.7
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Frame = +2
Query: 239 NNALHQGRDVIAQAQSGTG----QTATF---SISILQLIDTSIRECQALILAPTRELAQQ 397
+NAL + R + + G G TAT S+ +L+ + IRE Q +LA ELA++
Sbjct: 1012 DNALTKSRCALLERVRGGGAMMTSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK 1071
Query: 398 IQKVVIALGDHLNAK 442
QK + A + + K
Sbjct: 1072 -QKAIDAQEEEIQTK 1085
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 27.5 bits (58), Expect = 6.7
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Frame = +2
Query: 239 NNALHQGRDVIAQAQSGTG----QTATF---SISILQLIDTSIRECQALILAPTRELAQQ 397
+NAL + R + + G G TAT S+ +L+ + IRE Q +LA ELA++
Sbjct: 1012 DNALTKSRCALLERVRGGGAMMTSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK 1071
Query: 398 IQKVVIALGDHLNAK 442
QK + A + + K
Sbjct: 1072 -QKAIDAQEEEIQTK 1085
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 359 ALILAPTRELAQQIQKVVIALGDHL 433
A+I+APT+EL QI K+ + L L
Sbjct: 99 AVIIAPTKELITQIYKLFVKLSQAL 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,759,541
Number of Sequences: 27780
Number of extensions: 299401
Number of successful extensions: 919
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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