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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0254
         (546 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039720-12|AAB96704.1|  399|Caenorhabditis elegans Hypothetical...   138   2e-33
AC024844-2|AAK29954.2|  399|Caenorhabditis elegans Hypothetical ...   138   2e-33
Z12116-1|CAA78102.1|  402|Caenorhabditis elegans protein ( C.ele...   118   3e-27
U13876-3|AAA21170.1|  402|Caenorhabditis elegans Initiation fact...   118   3e-27
AC006605-1|AAK85443.1|  430|Caenorhabditis elegans Conserved ger...    77   6e-15
AC006661-5|AAF39890.2|  488|Caenorhabditis elegans Hypothetical ...    66   1e-11
AC006661-4|ABB88208.1|  561|Caenorhabditis elegans Hypothetical ...    66   1e-11
Z50071-3|CAA90407.1|  613|Caenorhabditis elegans Hypothetical pr...    61   4e-10
Z50071-2|CAA90406.1|  638|Caenorhabditis elegans Hypothetical pr...    61   4e-10
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr...    61   4e-10
AC024876-4|AAU05555.1|  825|Caenorhabditis elegans Hypothetical ...    58   3e-09
AC024876-3|AAU05556.1|  871|Caenorhabditis elegans Hypothetical ...    58   3e-09
U13876-12|AAA21169.1|  363|Caenorhabditis elegans Hypothetical p...    57   1e-08
Z29115-1|CAA82362.1|  489|Caenorhabditis elegans Hypothetical pr...    54   7e-08
Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical pr...    53   1e-07
U13070-1|AAK67224.1|  730|Caenorhabditis elegans Hypothetical pr...    53   1e-07
EU051652-1|ABS85191.1|  973|Caenorhabditis elegans MEL-46 protein.     52   2e-07
CU457744-1|CAM36366.2|  973|Caenorhabditis elegans Hypothetical ...    52   2e-07
Z54327-7|CAD57690.1|  268|Caenorhabditis elegans Hypothetical pr...    49   2e-06
Z54327-6|CAA91120.1|  425|Caenorhabditis elegans Hypothetical pr...    49   2e-06
U08102-1|AAB65852.1|  417|Caenorhabditis elegans putative RNA he...    49   2e-06
AF045641-1|AAK68386.1|  970|Caenorhabditis elegans Hypothetical ...    49   3e-06
AC025726-23|AAK73934.1|  763|Caenorhabditis elegans Hypothetical...    48   3e-06
Z22177-1|CAA80151.1|  578|Caenorhabditis elegans Hypothetical pr...    47   8e-06
AC024753-1|AAF60456.1|  732|Caenorhabditis elegans Hypothetical ...    46   1e-05
AC006665-5|AAF39907.1|  630|Caenorhabditis elegans Hypothetical ...    45   4e-05
U62772-1|AAB04136.1|  763|Caenorhabditis elegans RNA helicase pr...    44   9e-05
U60449-1|AAB03510.1|  974|Caenorhabditis elegans GLH-2 protein.        44   9e-05
U60194-1|AAB03337.1|  974|Caenorhabditis elegans RNA helicase GL...    44   9e-05
L19948-1|AAC27384.1|  763|Caenorhabditis elegans RNA helicase pr...    44   9e-05
AF000197-1|AAB52901.2|  763|Caenorhabditis elegans Germ-line hel...    44   9e-05
AC006625-11|AAK68269.1|  974|Caenorhabditis elegans Germ-line he...    44   9e-05
AF067608-1|AAC17654.2|  544|Caenorhabditis elegans Hypothetical ...    43   1e-04
AC024810-3|AAU20831.1|  660|Caenorhabditis elegans Vasa- and bel...    42   2e-04
AC024810-2|AAK68520.1|  644|Caenorhabditis elegans Vasa- and bel...    42   2e-04
AC024810-1|AAF60764.1|  641|Caenorhabditis elegans Vasa- and bel...    42   2e-04
U80447-2|AAO38637.1|  579|Caenorhabditis elegans Hypothetical pr...    41   7e-04
U80447-1|AAB37806.1|  746|Caenorhabditis elegans Hypothetical pr...    41   7e-04
Z81094-7|CAB03153.2|  960|Caenorhabditis elegans Hypothetical pr...    40   0.001
AL034488-3|CAA22456.1|  504|Caenorhabditis elegans Hypothetical ...    38   0.004
AF079509-1|AAC28388.1|  720|Caenorhabditis elegans germline RNA ...    38   0.005
AF003145-4|AAB57719.1|  720|Caenorhabditis elegans Germ-line hel...    38   0.005
AF025451-3|AAB71200.2|  634|Caenorhabditis elegans Hypothetical ...    37   0.011
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ...    36   0.019
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel...    36   0.019
AC024859-14|AAY43989.1|  643|Caenorhabditis elegans Hypothetical...    36   0.019
AF003740-7|AAC48142.2|  625|Caenorhabditis elegans Hypothetical ...    36   0.025
Z81449-4|CAB03765.1|  811|Caenorhabditis elegans Hypothetical pr...    33   0.10 
L17337-1|AAP68928.1|  593|Caenorhabditis elegans Hypothetical pr...    33   0.18 
AC006748-6|AAF60516.1|  582|Caenorhabditis elegans Hypothetical ...    31   0.41 
Z75546-3|CAA99891.1|  581|Caenorhabditis elegans Hypothetical pr...    30   0.95 
AC024830-10|AAF59610.3|  728|Caenorhabditis elegans Hypothetical...    29   2.2  
AC006748-5|AAX55685.1|  471|Caenorhabditis elegans Hypothetical ...    29   2.9  
U00033-1|AAC48292.3|  731|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical...    27   6.7  
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical...    27   6.7  
AF025451-4|AAL16306.1|  567|Caenorhabditis elegans Hypothetical ...    27   8.8  

>AF039720-12|AAB96704.1|  399|Caenorhabditis elegans Hypothetical
           protein F33D11.10 protein.
          Length = 399

 Score =  138 bits (334), Expect = 2e-33
 Identities = 64/88 (72%), Positives = 78/88 (88%)
 Frame = +2

Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
           A+ + RDVIAQAQSGTG+TATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALG
Sbjct: 59  AILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALG 118

Query: 425 DHLNAKCHACIGGTNVREDIRQLEXGVH 508
           D++N +CHACIGGTN+ EDIR+L+ G H
Sbjct: 119 DYMNVQCHACIGGTNLGEDIRKLDYGQH 146



 Score = 63.3 bits (147), Expect = 1e-10
 Identities = 28/39 (71%), Positives = 33/39 (84%)
 Frame = +3

Query: 141 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 257
           V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+   +K
Sbjct: 24  VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILK 62


>AC024844-2|AAK29954.2|  399|Caenorhabditis elegans Hypothetical
           protein Y65B4A.6 protein.
          Length = 399

 Score =  138 bits (334), Expect = 2e-33
 Identities = 64/88 (72%), Positives = 78/88 (88%)
 Frame = +2

Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALG 424
           A+ + RDVIAQAQSGTG+TATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALG
Sbjct: 59  AILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALG 118

Query: 425 DHLNAKCHACIGGTNVREDIRQLEXGVH 508
           D++N +CHACIGGTN+ EDIR+L+ G H
Sbjct: 119 DYMNVQCHACIGGTNLGEDIRKLDYGQH 146



 Score = 63.3 bits (147), Expect = 1e-10
 Identities = 28/39 (71%), Positives = 33/39 (84%)
 Frame = +3

Query: 141 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 257
           ++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI   +K
Sbjct: 24  IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILK 62


>Z12116-1|CAA78102.1|  402|Caenorhabditis elegans protein (
           C.elegans mRNA for eIF-4A homologue. ).
          Length = 402

 Score =  118 bits (284), Expect = 3e-27
 Identities = 57/84 (67%), Positives = 69/84 (82%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
           G+DVIAQAQSGTG+TATFS+SILQ ID      QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 66  GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125

Query: 437 AKCHACIGGTNVREDIRQLEXGVH 508
                CIGGT+VR+D R+LE G+H
Sbjct: 126 VNILPCIGGTSVRDDQRKLEAGIH 149



 Score = 79.4 bits (187), Expect = 2e-15
 Identities = 34/46 (73%), Positives = 42/46 (91%)
 Frame = +3

Query: 114 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC 251
           G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC
Sbjct: 18  GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPC 63


>U13876-3|AAA21170.1|  402|Caenorhabditis elegans Initiation factor
           protein 1, isoforma protein.
          Length = 402

 Score =  118 bits (284), Expect = 3e-27
 Identities = 57/84 (67%), Positives = 69/84 (82%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
           G+DVIAQAQSGTG+TATFS+SILQ ID      QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 66  GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125

Query: 437 AKCHACIGGTNVREDIRQLEXGVH 508
                CIGGT+VR+D R+LE G+H
Sbjct: 126 VNILPCIGGTSVRDDQRKLEAGIH 149



 Score = 79.4 bits (187), Expect = 2e-15
 Identities = 34/46 (73%), Positives = 42/46 (91%)
 Frame = +3

Query: 114 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC 251
           G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC
Sbjct: 18  GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPC 63


>AC006605-1|AAK85443.1|  430|Caenorhabditis elegans Conserved
           germline helicase protein1 protein.
          Length = 430

 Score = 77.4 bits (182), Expect = 6e-15
 Identities = 31/84 (36%), Positives = 56/84 (66%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
           G+D++A+A++GTG+T  + I +++ I  +++  QA+++ PTRELA Q  ++ + L  H+ 
Sbjct: 80  GQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKHIQ 139

Query: 437 AKCHACIGGTNVREDIRQLEXGVH 508
            K     GGT++R+DI +L   VH
Sbjct: 140 LKVMVTTGGTDLRDDIMRLNGTVH 163



 Score = 33.9 bits (74), Expect = 0.077
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = +3

Query: 153 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
           F+D  L  +LL GI+  G+EKPS IQ+ +I
Sbjct: 45  FEDFCLGRDLLMGIFEKGWEKPSPIQEASI 74


>AC006661-5|AAF39890.2|  488|Caenorhabditis elegans Hypothetical
           protein H20J04.4a protein.
          Length = 488

 Score = 66.5 bits (155), Expect = 1e-11
 Identities = 34/85 (40%), Positives = 48/85 (56%)
 Frame = +2

Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
           +G D++  A++GTG+T  F+I ILQ +        ALIL PTRELA QI +   ALG  +
Sbjct: 125 EGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPI 184

Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
             KC   +GG ++    R+L    H
Sbjct: 185 TLKCSVIVGGRSLIHQARELSERPH 209


>AC006661-4|ABB88208.1|  561|Caenorhabditis elegans Hypothetical
           protein H20J04.4b protein.
          Length = 561

 Score = 66.5 bits (155), Expect = 1e-11
 Identities = 34/85 (40%), Positives = 48/85 (56%)
 Frame = +2

Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
           +G D++  A++GTG+T  F+I ILQ +        ALIL PTRELA QI +   ALG  +
Sbjct: 125 EGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPI 184

Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
             KC   +GG ++    R+L    H
Sbjct: 185 TLKCSVIVGGRSLIHQARELSERPH 209


>Z50071-3|CAA90407.1|  613|Caenorhabditis elegans Hypothetical
           protein T07D4.4c protein.
          Length = 613

 Score = 61.3 bits (142), Expect = 4e-10
 Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
 Frame = +2

Query: 263 DVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 439
           ++IAQAQSGTG+TA F +++L  ID ++   Q + LAPT ELA+QI +VV  +G  + N 
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 309

Query: 440 KCHACIGGTNV 472
           K H  I G N+
Sbjct: 310 KIHYAIKGGNM 320


>Z50071-2|CAA90406.1|  638|Caenorhabditis elegans Hypothetical
           protein T07D4.4b protein.
          Length = 638

 Score = 61.3 bits (142), Expect = 4e-10
 Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
 Frame = +2

Query: 263 DVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 439
           ++IAQAQSGTG+TA F +++L  ID ++   Q + LAPT ELA+QI +VV  +G  + N 
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 334

Query: 440 KCHACIGGTNV 472
           K H  I G N+
Sbjct: 335 KIHYAIKGGNM 345


>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
           protein T07D4.4a protein.
          Length = 1022

 Score = 61.3 bits (142), Expect = 4e-10
 Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
 Frame = +2

Query: 263 DVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 439
           ++IAQAQSGTG+TA F +++L  ID ++   Q + LAPT ELA+QI +VV  +G  + N 
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 718

Query: 440 KCHACIGGTNV 472
           K H  I G N+
Sbjct: 719 KIHYAIKGGNM 729


>AC024876-4|AAU05555.1|  825|Caenorhabditis elegans Hypothetical
           protein Y94H6A.5a protein.
          Length = 825

 Score = 58.4 bits (135), Expect = 3e-09
 Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDT-SIRECQALILAPTRELAQQIQKVVIALGDHL 433
           G+DV+A +++G+G+TA F I +LQ +        +AL+++PTRELA Q  KVV  LG   
Sbjct: 61  GKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFT 120

Query: 434 NAKCHACIGGTNVRE 478
             +C   +GG  + E
Sbjct: 121 GLRCACLVGGDQIEE 135


>AC024876-3|AAU05556.1|  871|Caenorhabditis elegans Hypothetical
           protein Y94H6A.5b protein.
          Length = 871

 Score = 58.4 bits (135), Expect = 3e-09
 Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDT-SIRECQALILAPTRELAQQIQKVVIALGDHL 433
           G+DV+A +++G+G+TA F I +LQ +        +AL+++PTRELA Q  KVV  LG   
Sbjct: 61  GKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFT 120

Query: 434 NAKCHACIGGTNVRE 478
             +C   +GG  + E
Sbjct: 121 GLRCACLVGGDQIEE 135


>U13876-12|AAA21169.1|  363|Caenorhabditis elegans Hypothetical
           protein F57B9.3 protein.
          Length = 363

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 26/51 (50%), Positives = 35/51 (68%)
 Frame = +3

Query: 162 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIKDAMLSLKPSQELDKLLLSL 314
           M LKEELLRGIY +GFEKPSAIQ+ A+ PC     ++++      K ++SL
Sbjct: 1   MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISL 51



 Score = 52.4 bits (120), Expect = 2e-07
 Identities = 28/75 (37%), Positives = 43/75 (57%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
           G+DV  Q+Q+G+G+T    I ILQ ID      Q ++LAP R +AQ+  + + +LG +LN
Sbjct: 33  GKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRAHEQLKSLGRNLN 92

Query: 437 AKCHACIGGTNVRED 481
                C+G     E+
Sbjct: 93  VNA-TCLGFDTTAEN 106


>Z29115-1|CAA82362.1|  489|Caenorhabditis elegans Hypothetical
           protein T26G10.1 protein.
          Length = 489

 Score = 54.0 bits (124), Expect = 7e-08
 Identities = 30/85 (35%), Positives = 45/85 (52%)
 Frame = +2

Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 433
           QG+DVI  A++G+G+T  F+I +LQ +    +    L+L PTRELA QI +   ALG  +
Sbjct: 80  QGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGI 139

Query: 434 NAKCHACIGGTNVREDIRQLEXGVH 508
                  +GG ++      L    H
Sbjct: 140 GLIAAVIVGGVDMAAQAMALARRPH 164


>Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical
           protein F58E10.3a protein.
          Length = 561

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQA-----LILAPTRELAQQIQKVVIAL 421
           GRD+I+ A++G+G+T  F +  L  I       +      L+L PTRELAQQ+Q+V I  
Sbjct: 166 GRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDF 225

Query: 422 GDHLNAKCHACIGGTNVREDIRQLEXGV 505
              L  K     GG +     R LE GV
Sbjct: 226 CHSLGLKMTCLFGGASKGPQARDLERGV 253


>U13070-1|AAK67224.1|  730|Caenorhabditis elegans Hypothetical
           protein F01F1.7 protein.
          Length = 730

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
 Frame = +2

Query: 254 QGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQ----------ALILAPTRELAQQIQ 403
           Q RDVI  A++G+G+TA F + +L  I TS+ + +          A+I+APTRELAQQI+
Sbjct: 337 QNRDVIGVAETGSGKTAAFLLPLLVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQIE 395

Query: 404 KVVIALGDHLNAKCHACIGGTNVREDIRQLEXGV 505
           +     G  L  K  + IGG +  +   +L  GV
Sbjct: 396 EETNKFGKLLGIKTVSVIGGASREDQGMKLRMGV 429


>EU051652-1|ABS85191.1|  973|Caenorhabditis elegans MEL-46 protein.
          Length = 973

 Score = 52.4 bits (120), Expect = 2e-07
 Identities = 25/70 (35%), Positives = 44/70 (62%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
           GRD++ QA+SGTG+T  FS+  ++ +D+     Q +I+ PTRE++ QI++ V  +     
Sbjct: 59  GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TG 117

Query: 437 AKCHACIGGT 466
           A+    +GG+
Sbjct: 118 ARTSVYVGGS 127


>CU457744-1|CAM36366.2|  973|Caenorhabditis elegans Hypothetical
           protein T06A10.1 protein.
          Length = 973

 Score = 52.4 bits (120), Expect = 2e-07
 Identities = 25/70 (35%), Positives = 44/70 (62%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 436
           GRD++ QA+SGTG+T  FS+  ++ +D+     Q +I+ PTRE++ QI++ V  +     
Sbjct: 59  GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TG 117

Query: 437 AKCHACIGGT 466
           A+    +GG+
Sbjct: 118 ARTSVYVGGS 127


>Z54327-7|CAD57690.1|  268|Caenorhabditis elegans Hypothetical
           protein C26D10.2b protein.
          Length = 268

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 433
           G DV+ QA+SG G+TA F I+ LQ ++    E   + +  TRELA QI K       +L 
Sbjct: 78  GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 137

Query: 434 NAKCHACIGGTNVREDIRQL 493
             K     GG  +++D  +L
Sbjct: 138 GVKVAVFFGGMAIKKDEERL 157


>Z54327-6|CAA91120.1|  425|Caenorhabditis elegans Hypothetical
           protein C26D10.2a protein.
          Length = 425

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 433
           G DV+ QA+SG G+TA F I+ LQ ++    E   + +  TRELA QI K       +L 
Sbjct: 78  GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 137

Query: 434 NAKCHACIGGTNVREDIRQL 493
             K     GG  +++D  +L
Sbjct: 138 GVKVAVFFGGMAIKKDEERL 157


>U08102-1|AAB65852.1|  417|Caenorhabditis elegans putative RNA
           helicase protein.
          Length = 417

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 433
           G DV+ QA+SG G+TA F I+ LQ ++    E   + +  TRELA QI K       +L 
Sbjct: 77  GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 136

Query: 434 NAKCHACIGGTNVREDIRQL 493
             K     GG  +++D  +L
Sbjct: 137 GVKVAVFFGGMAIKKDEERL 156


>AF045641-1|AAK68386.1|  970|Caenorhabditis elegans Hypothetical
           protein F53H1.1 protein.
          Length = 970

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
 Frame = +2

Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLI--DTSIRECQ---ALILAPTRELAQQIQKV 409
           ++  GRDVI  A++G+G+T  F + + + I     + E     A+ILAPTRELA Q  K 
Sbjct: 337 SIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKE 396

Query: 410 VIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
                  L  K     GG  + E I  L+ G
Sbjct: 397 ANKFAKPLGLKVACTYGGVGISEQIADLKRG 427


>AC025726-23|AAK73934.1|  763|Caenorhabditis elegans Hypothetical
           protein Y71G12B.8 protein.
          Length = 763

 Score = 48.4 bits (110), Expect = 3e-06
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGQTATFSISILQ--LIDTSIREC-QALILAPTRELAQQIQKVVIALGD 427
           G+D+ A A +GTG+TA F + IL+  +       C + L+L PTRELA Q+ +V   L  
Sbjct: 185 GKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLST 244

Query: 428 HLNAKCHACIGGTNVREDIRQLEXG 502
            +  +   C GG +++     L  G
Sbjct: 245 FIQLEVCLCAGGLDLKAQEAALRSG 269



 Score = 30.7 bits (66), Expect = 0.72
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = +3

Query: 48  EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 221
           E  K+G SK  Q + D    +  G +LDT    V  +F+ MNL  ++L+     G+  P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172

Query: 222 AIQQRAI 242
            IQQ  I
Sbjct: 173 PIQQACI 179


>Z22177-1|CAA80151.1|  578|Caenorhabditis elegans Hypothetical
           protein ZK512.2 protein.
          Length = 578

 Score = 47.2 bits (107), Expect = 8e-06
 Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
 Frame = +2

Query: 263 DVIAQAQSGTGQTATFSISILQLIDTSI---RECQALILAPTRELAQQIQKVVIALGDHL 433
           DV+ ++ +G+G+T  F + ++++I  +     +  ALIL+P+REL  QI  V+    + L
Sbjct: 48  DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107

Query: 434 NAKCHACIGGTNVREDIRQLE 496
           N       GG  V ++I+  +
Sbjct: 108 NLTVETVTGGQKVDKNIKMFK 128


>AC024753-1|AAF60456.1|  732|Caenorhabditis elegans Hypothetical
           protein Y23H5B.6 protein.
          Length = 732

 Score = 46.4 bits (105), Expect = 1e-05
 Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGQTATFSISILQLIDTSIRECQ----ALILAPTRELAQQIQKVVIALG 424
           G DV+  A++G+G+T    I +L+ +  +         ALI++PTRELA Q    + A+G
Sbjct: 113 GSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINAVG 172

Query: 425 DHLNAKCHACIGGTNV 472
            H    C   IGG++V
Sbjct: 173 AHHGFSCGLVIGGSDV 188


>AC006665-5|AAF39907.1|  630|Caenorhabditis elegans Hypothetical
           protein H27M09.1 protein.
          Length = 630

 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGQTATFSISIL-----QLIDTSIRECQA---LILAPTRELAQQIQKVV 412
           GRD+I  A +G+G+T TF + ++     Q +       +    LI+ P+RELA+QI  ++
Sbjct: 227 GRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLI 286

Query: 413 IALGDHL------NAKCHACIGGTNVREDIRQLEXGVH 508
           I + D L        +   CIGG  + E  + +  G+H
Sbjct: 287 IEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIH 324


>U62772-1|AAB04136.1|  763|Caenorhabditis elegans RNA helicase
           protein.
          Length = 763

 Score = 43.6 bits (98), Expect = 9e-05
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
 Frame = +2

Query: 248 LHQGRDVIAQAQSGTGQTATFSISIL-QLIDTSIRE------C--QALILAPTRELAQQI 400
           +HQG D++A AQ+G+G+TA F + I+ +LID +         C  + +IL PTRELA QI
Sbjct: 375 VHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434

Query: 401 QKVVIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
                        +     GG  V  +  Q+E G
Sbjct: 435 YNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKG 468


>U60449-1|AAB03510.1|  974|Caenorhabditis elegans GLH-2 protein.
          Length = 974

 Score = 43.6 bits (98), Expect = 9e-05
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
 Frame = +2

Query: 248 LHQGRDVIAQAQSGTGQTATFSISIL-QLIDTSIRE------C--QALILAPTRELAQQI 400
           +HQG D++A AQ+G+G+TA F + I+ +LID +         C  + +IL PTREL  QI
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645

Query: 401 QKVVIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
                        +     GG  V  +  Q+E G
Sbjct: 646 YNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKG 679


>U60194-1|AAB03337.1|  974|Caenorhabditis elegans RNA helicase GLH-2
           protein.
          Length = 974

 Score = 43.6 bits (98), Expect = 9e-05
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
 Frame = +2

Query: 248 LHQGRDVIAQAQSGTGQTATFSISIL-QLIDTSIRE------C--QALILAPTRELAQQI 400
           +HQG D++A AQ+G+G+TA F + I+ +LID +         C  + +IL PTREL  QI
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645

Query: 401 QKVVIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
                        +     GG  V  +  Q+E G
Sbjct: 646 YNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKG 679


>L19948-1|AAC27384.1|  763|Caenorhabditis elegans RNA helicase
           protein.
          Length = 763

 Score = 43.6 bits (98), Expect = 9e-05
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
 Frame = +2

Query: 248 LHQGRDVIAQAQSGTGQTATFSISIL-QLIDTSIRE------C--QALILAPTRELAQQI 400
           +HQG D++A AQ+G+G+TA F + I+ +LID +         C  + +IL PTRELA QI
Sbjct: 375 VHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434

Query: 401 QKVVIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
                        +     GG  V  +  Q+E G
Sbjct: 435 YNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKG 468


>AF000197-1|AAB52901.2|  763|Caenorhabditis elegans Germ-line
           helicase protein 1 protein.
          Length = 763

 Score = 43.6 bits (98), Expect = 9e-05
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
 Frame = +2

Query: 248 LHQGRDVIAQAQSGTGQTATFSISIL-QLIDTSIRE------C--QALILAPTRELAQQI 400
           +HQG D++A AQ+G+G+TA F + I+ +LID +         C  + +IL PTRELA QI
Sbjct: 375 VHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434

Query: 401 QKVVIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
                        +     GG  V  +  Q+E G
Sbjct: 435 YNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKG 468


>AC006625-11|AAK68269.1|  974|Caenorhabditis elegans Germ-line
           helicase protein 2 protein.
          Length = 974

 Score = 43.6 bits (98), Expect = 9e-05
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
 Frame = +2

Query: 248 LHQGRDVIAQAQSGTGQTATFSISIL-QLIDTSIRE------C--QALILAPTRELAQQI 400
           +HQG D++A AQ+G+G+TA F + I+ +LID +         C  + +IL PTREL  QI
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645

Query: 401 QKVVIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
                        +     GG  V  +  Q+E G
Sbjct: 646 YNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKG 679


>AF067608-1|AAC17654.2|  544|Caenorhabditis elegans Hypothetical
           protein B0511.6 protein.
          Length = 544

 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
 Frame = +2

Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLID----TSIRECQALILAPTRELAQQIQKVVI 415
           L +G+DV+A A++G+G+T  F +  ++L+             +I++PTREL+ Q   V+ 
Sbjct: 102 LLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLS 161

Query: 416 ALGDHLNAKCHACIGGTNVREDIRQLEXGV 505
            L +  N      +GG+N   +  +L  GV
Sbjct: 162 ELLEGSNLTYGLVMGGSNRSAEKDKLAKGV 191


>AC024810-3|AAU20831.1|  660|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform c protein.
          Length = 660

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 16/99 (16%)
 Frame = +2

Query: 260 RDVIAQAQSGTGQTATFSISILQLI------------DTSIRECQ---ALILAPTRELAQ 394
           RD+++ AQ+G+G+TA F + I+Q I             T+ R      AL+L+PTRELA 
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 236

Query: 395 QIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLEXGVH 508
           QI K         N +     GG  N R+ + +L  G H
Sbjct: 237 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTH 275


>AC024810-2|AAK68520.1|  644|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform b protein.
          Length = 644

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 16/99 (16%)
 Frame = +2

Query: 260 RDVIAQAQSGTGQTATFSISILQLI------------DTSIRECQ---ALILAPTRELAQ 394
           RD+++ AQ+G+G+TA F + I+Q I             T+ R      AL+L+PTRELA 
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 220

Query: 395 QIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLEXGVH 508
           QI K         N +     GG  N R+ + +L  G H
Sbjct: 221 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTH 259


>AC024810-1|AAF60764.1|  641|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform a protein.
          Length = 641

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 16/99 (16%)
 Frame = +2

Query: 260 RDVIAQAQSGTGQTATFSISILQLI------------DTSIRECQ---ALILAPTRELAQ 394
           RD+++ AQ+G+G+TA F + I+Q I             T+ R      AL+L+PTRELA 
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 217

Query: 395 QIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLEXGVH 508
           QI K         N +     GG  N R+ + +L  G H
Sbjct: 218 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTH 256


>U80447-2|AAO38637.1|  579|Caenorhabditis elegans Hypothetical
           protein F55F8.2b protein.
          Length = 579

 Score = 40.7 bits (91), Expect = 7e-04
 Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
 Frame = +2

Query: 245 ALHQGRDVIAQAQSGTGQTATFSISIL-QLIDTS----------IRECQALILAPTRELA 391
           A+   +DV+  A++G+G+T  F I ++ +L+++S          +R  +ALI+APTREL 
Sbjct: 22  AVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELV 81

Query: 392 QQIQKVVIALGDHLNAKCHACIGG 463
            QI K + AL         + +GG
Sbjct: 82  IQIMKHINALISTTQLIATSIVGG 105


>U80447-1|AAB37806.1|  746|Caenorhabditis elegans Hypothetical
           protein F55F8.2a protein.
          Length = 746

 Score = 40.7 bits (91), Expect = 7e-04
 Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
 Frame = +2

Query: 245 ALHQGRDVIAQAQSGTGQTATFSISIL-QLIDTS----------IRECQALILAPTRELA 391
           A+   +DV+  A++G+G+T  F I ++ +L+++S          +R  +ALI+APTREL 
Sbjct: 189 AVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELV 248

Query: 392 QQIQKVVIALGDHLNAKCHACIGG 463
            QI K + AL         + +GG
Sbjct: 249 IQIMKHINALISTTQLIATSIVGG 272


>Z81094-7|CAB03153.2|  960|Caenorhabditis elegans Hypothetical
           protein F58G11.2 protein.
          Length = 960

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 10/62 (16%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGQTATFSISILQLI-----DTSIRECQ-----ALILAPTRELAQQIQK 406
           G DV+ QA++  G+TA F + I+  I     +T  +  Q     ALILAPTRELA QI +
Sbjct: 418 GHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHE 477

Query: 407 VV 412
            +
Sbjct: 478 AL 479


>AL034488-3|CAA22456.1|  504|Caenorhabditis elegans Hypothetical
           protein Y54G11A.3 protein.
          Length = 504

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 12/98 (12%)
 Frame = +2

Query: 248 LHQGRDVIAQAQSGTGQTATFSISILQLIDTSIRECQ-----------ALILAPTRELAQ 394
           L  G+D I  +Q+G+G+T  F +  L  ID  + + +            L+L+PTRELAQ
Sbjct: 118 LLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQ 177

Query: 395 QIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLEXGV 505
           QI+  V       N     C+ GG +  E +     GV
Sbjct: 178 QIEGEVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGV 213


>AF079509-1|AAC28388.1|  720|Caenorhabditis elegans germline RNA
           helicase-3 protein.
          Length = 720

 Score = 37.9 bits (84), Expect = 0.005
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGQTATFSISILQ--LIDTSIR-----EC--QALILAPTRELAQQIQKV 409
           G+D++A AQ+G+G+TA F + I+   +++  +       C  + +IL PTRELA QI   
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNE 394

Query: 410 VIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
                     +     GG NV  +  Q+  G
Sbjct: 395 GRKFSYQSVMEIKPVYGGINVGYNKSQIMKG 425


>AF003145-4|AAB57719.1|  720|Caenorhabditis elegans Germ-line
           helicase protein 3 protein.
          Length = 720

 Score = 37.9 bits (84), Expect = 0.005
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGQTATFSISILQ--LIDTSIR-----EC--QALILAPTRELAQQIQKV 409
           G+D++A AQ+G+G+TA F + I+   +++  +       C  + +IL PTRELA QI   
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNE 394

Query: 410 VIALGDHLNAKCHACIGGTNVREDIRQLEXG 502
                     +     GG NV  +  Q+  G
Sbjct: 395 GRKFSYQSVMEIKPVYGGINVGYNKSQIMKG 425


>AF025451-3|AAB71200.2|  634|Caenorhabditis elegans Hypothetical
           protein C24H12.4a protein.
          Length = 634

 Score = 36.7 bits (81), Expect = 0.011
 Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
 Frame = +2

Query: 254 QGRDVIAQAQSGTGQTATFSISILQLI-------DTSIRECQALILAPTRELAQQIQKVV 412
           + ++++ +A++G+G+T  F I ++Q +       D S+    A+I+APT+EL  QI K+ 
Sbjct: 125 ENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIYKLF 183

Query: 413 IALGDHL 433
           + L   L
Sbjct: 184 VKLSQAL 190



 Score = 30.3 bits (65), Expect = 0.95
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 111 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
           P   + D++   +TF D  L E +L+ I   G+EK + +Q+  I
Sbjct: 77  PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVI 120


>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
            helicase-4 protein.
          Length = 1156

 Score = 35.9 bits (79), Expect = 0.019
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
 Frame = +2

Query: 257  GRDVIAQAQSGTGQTATFSIS-ILQLIDTSIRECQA---------LILAPTRELAQQIQK 406
            G DV+A A +G+G+T  F I  +++L++   ++            LI+APTREL  Q   
Sbjct: 773  GNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFT 832

Query: 407  VVIALGDHLNAKCHACIGGTNVREDIRQL 493
                L      KC    GG +   +++ L
Sbjct: 833  TARQLTYETGLKCGLAFGGYSRNANVQHL 861


>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
            protein 4 protein.
          Length = 1156

 Score = 35.9 bits (79), Expect = 0.019
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
 Frame = +2

Query: 257  GRDVIAQAQSGTGQTATFSIS-ILQLIDTSIRECQA---------LILAPTRELAQQIQK 406
            G DV+A A +G+G+T  F I  +++L++   ++            LI+APTREL  Q   
Sbjct: 773  GNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFT 832

Query: 407  VVIALGDHLNAKCHACIGGTNVREDIRQL 493
                L      KC    GG +   +++ L
Sbjct: 833  TARQLTYETGLKCGLAFGGYSRNANVQHL 861


>AC024859-14|AAY43989.1|  643|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.19 protein.
          Length = 643

 Score = 35.9 bits (79), Expect = 0.019
 Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 17/105 (16%)
 Frame = +2

Query: 245 ALHQGRDVIAQAQSGTGQTATFSI----SILQ----LIDTSI-----RECQ---ALILAP 376
           AL  GRD+++ AQ+G+G+TA F +    +ILQ     +  S+     R+ Q   AL+L+P
Sbjct: 199 ALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSP 258

Query: 377 TRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLEXGVH 508
           TREL+ QI                   GG  N ++ I +L  G H
Sbjct: 259 TRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCH 303


>AF003740-7|AAC48142.2|  625|Caenorhabditis elegans Hypothetical
           protein C41D11.7 protein.
          Length = 625

 Score = 35.5 bits (78), Expect = 0.025
 Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
 Frame = +2

Query: 245 ALHQGRDVIA-QAQSGTGQTATFSISILQLIDTSIRECQALILAPTRELAQQIQKVVIAL 421
           AL++ R ++  Q   GTG+T T ++ + +LI    ++ Q ++LAPTRE    I+ +    
Sbjct: 77  ALNENRKLVCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKT 133

Query: 422 GDHLNAKCHA-CIGGTNVREDI 484
              +  K H   +  TN   D+
Sbjct: 134 LKRMGIKVHEHALMDTNEYRDV 155


>Z81449-4|CAB03765.1|  811|Caenorhabditis elegans Hypothetical
           protein C46F11.4 protein.
          Length = 811

 Score = 33.5 bits (73), Expect = 0.10
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGQTATF----SISILQLIDTSIRECQ-ALILAPTRELAQQI 400
           GRDV+  A++G+G+TA +     + I+   D    E   A+I+ PTRELA Q+
Sbjct: 302 GRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQV 354


>L17337-1|AAP68928.1|  593|Caenorhabditis elegans Hypothetical
           protein ZK686.2 protein.
          Length = 593

 Score = 32.7 bits (71), Expect = 0.18
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
 Frame = +2

Query: 260 RDVIAQAQSGTGQTATFSISILQLIDTS-IRECQALILAPTRELAQQIQKVVIALGDHLN 436
           RDV   A +G+G+T  + + +L  + +   +  QA+IL P + L  QI        D   
Sbjct: 157 RDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLVAQIVDEFKRWNDESG 216

Query: 437 -AKCHACIGGTNVREDIRQL 493
            AK  +  G  +  ++ RQL
Sbjct: 217 VAKVVSLSGANDFEKEARQL 236


>AC006748-6|AAF60516.1|  582|Caenorhabditis elegans Hypothetical
           protein Y39A3B.5a protein.
          Length = 582

 Score = 31.5 bits (68), Expect = 0.41
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 108 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 10
           P P +  +  D     FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370


>Z75546-3|CAA99891.1|  581|Caenorhabditis elegans Hypothetical
           protein R05D11.4 protein.
          Length = 581

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 10/56 (17%)
 Frame = +2

Query: 260 RDVIAQAQSGTGQTATFSISILQLI----------DTSIRECQALILAPTRELAQQ 397
           R+V+A A +G+G+T  F++ ++  I           ++  +  A++L PTRELA Q
Sbjct: 164 RNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219


>AC024830-10|AAF59610.3|  728|Caenorhabditis elegans Hypothetical
           protein Y55F3BR.1 protein.
          Length = 728

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +2

Query: 245 ALHQGRDVIAQAQSGTGQTATFSISILQLI 334
           A+  G D +  A++G+G+T  FS+ I Q++
Sbjct: 35  AILGGADALIAAETGSGKTGAFSLPIAQIV 64



 Score = 28.7 bits (61), Expect = 2.9
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +1

Query: 502 CSLVVGTPGRVYDMI 546
           C +VVGTP RV+D+I
Sbjct: 335 CDIVVGTPSRVFDLI 349


>AC006748-5|AAX55685.1|  471|Caenorhabditis elegans Hypothetical
           protein Y39A3B.5c protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 78  DPSMAHFWNPLANLLTFFQTNKT 10
           D     FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259


>U00033-1|AAC48292.3|  731|Caenorhabditis elegans Hypothetical
           protein F37C12.7 protein.
          Length = 731

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
 Frame = +3

Query: 21  SERRSEDWPEDSKNGPSKD-QG-SYDGPPGMDPGTLDTDWDQVVETFDD 161
           SER   +W +D ++GP ++ QG + +  PG D  T+D  W + VE +D+
Sbjct: 63  SERVKANWVDD-RDGPIRNIQGHASETFPGKD--TVDKVWRKCVELYDE 108


>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
            protein Y105E8A.24b protein.
          Length = 1127

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
 Frame = +2

Query: 239  NNALHQGRDVIAQAQSGTG----QTATF---SISILQLIDTSIRECQALILAPTRELAQQ 397
            +NAL + R  + +   G G     TAT    S+ +L+  +  IRE Q  +LA   ELA++
Sbjct: 1012 DNALTKSRCALLERVRGGGAMMTSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK 1071

Query: 398  IQKVVIALGDHLNAK 442
             QK + A  + +  K
Sbjct: 1072 -QKAIDAQEEEIQTK 1085


>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
            protein Y105E8A.24a protein.
          Length = 1161

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
 Frame = +2

Query: 239  NNALHQGRDVIAQAQSGTG----QTATF---SISILQLIDTSIRECQALILAPTRELAQQ 397
            +NAL + R  + +   G G     TAT    S+ +L+  +  IRE Q  +LA   ELA++
Sbjct: 1012 DNALTKSRCALLERVRGGGAMMTSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK 1071

Query: 398  IQKVVIALGDHLNAK 442
             QK + A  + +  K
Sbjct: 1072 -QKAIDAQEEEIQTK 1085


>AF025451-4|AAL16306.1|  567|Caenorhabditis elegans Hypothetical
           protein C24H12.4b protein.
          Length = 567

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 359 ALILAPTRELAQQIQKVVIALGDHL 433
           A+I+APT+EL  QI K+ + L   L
Sbjct: 99  AVIIAPTKELITQIYKLFVKLSQAL 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,759,541
Number of Sequences: 27780
Number of extensions: 299401
Number of successful extensions: 919
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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