Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0253
         (722 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54MF6 Cluster: Putative uncharacterized protein; n=1; ...    34   3.1  
UniRef50_A5K8D2 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  
UniRef50_A0BX36 Cluster: Chromosome undetermined scaffold_133, w...    33   7.1  

>UniRef50_Q54MF6 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 316

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -2

Query: 301 YWWPKVYVKIKNYTYKTCCIHIMTWFYFV*RKTNRSF 191
           +W  +   K+ + ++ T C  I+TW  F  +KTN+SF
Sbjct: 125 FWVSETPYKVGSKSWNTACTRIVTWGLFKQKKTNKSF 161


>UniRef50_A5K8D2 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 2721

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1

Query: 310  LFCHNRNLFVETSESISFSVNDKEAYFSNATMYLIKKY 423
            LF  NR L+ E S+ I  + ND E +FS A   +   Y
Sbjct: 1975 LFAANRTLYYEVSKFIGMNQNDNEVFFSQALSIVASLY 2012


>UniRef50_A0BX36 Cluster: Chromosome undetermined scaffold_133,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_133,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 342

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -2

Query: 355 YFHLFQQIDFYYGKKGLIYWWPKVYVK--IKNYTYKTCCIHIMTW 227
           YF L QQ++F Y K+  + W  K   K   KNY ++   I IM++
Sbjct: 62  YFFLNQQMNFKYKKQSYVLWTFKKITKQSCKNYNFQMIQIQIMSY 106


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,120,901
Number of Sequences: 1657284
Number of extensions: 10717889
Number of successful extensions: 23021
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23008
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)