Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0253
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    26   0.36 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    26   0.36 
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     24   1.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    24   1.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    24   1.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           24   1.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    24   1.1  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   5.8  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   7.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 417  KIYFIILLT-YRQRSHRELIFKYRNNHHKIL 506
            KIYF  L+  Y+     ELI K   N H+I+
Sbjct: 1026 KIYFFYLVKFYKVSKSGELIHKIETNEHEII 1056



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 15/58 (25%), Positives = 24/58 (41%)
 Frame = +2

Query: 530 NFTNVIKVFRISVSHKNVISFRPIILSVCSP*VIFSIFVAFYSRNFTNVPCNKIRCKM 703
           N+T V  V +  V  + V +FR  + SV     IF +    Y   +  +   K  C +
Sbjct: 352 NYTLVFSVLKQYVMQQQVKNFRHSVRSVFFLSEIFGLVNLKYRETYFRLSKTKTFCTL 409


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 417 KIYFIILLT-YRQRSHRELIFKYRNNHHKIL 506
           KIYF  L+  Y+     ELI K   N H+I+
Sbjct: 307 KIYFFYLVKFYKVSKSGELIHKIETNEHEII 337


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 636 AFSLHFILEISRMFHVTKYAVKCKK 710
           A++ H ILE+ + FH  +Y  + ++
Sbjct: 239 AYTRHQILELEKEFHYNRYLTRRRR 263


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 636 AFSLHFILEISRMFHVTKYAVKCKK 710
           A++ H ILE+ + FH  +Y  + ++
Sbjct: 239 AYTRHQILELEKEFHYNRYLTRRRR 263


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +3

Query: 384 LFQQCNYVFNKKIYFIILLTYR-QRSHRELIFKYRNNHHKILI 509
           L  +C YVFN + Y    +T R  R  + +I + + N  +I++
Sbjct: 226 LISKCIYVFNPRYYLEKKVTRRLHRFTKSVIAERQENFKEIVV 268


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 636 AFSLHFILEISRMFHVTKYAVKCKK 710
           A++ H ILE+ + FH  +Y  + ++
Sbjct: 239 AYTRHQILELEKEFHYNRYLTRRRR 263


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +3

Query: 384 LFQQCNYVFNKKIYFIILLTYR-QRSHRELIFKYRNNHHKILI 509
           L  +C YVFN + Y    +T R  R  + +I + + N  +I++
Sbjct: 226 LISKCIYVFNPRYYLEKKVTRRLHRFTKSVIAERQENFKEIVV 268


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +2

Query: 158 LFISLNIYLSNKRSVSFPLNKIKPRHYVYTARFISV 265
           +FI L I    KRS   P   I+ R   + A F ++
Sbjct: 48  IFIILTIVFFEKRSALSPFELIQIRTINFVATFRTI 83


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 358 SFSVNDKEAYFSNAT 402
           +F VN+K++YF  AT
Sbjct: 127 TFFVNEKQSYFHIAT 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,695
Number of Sequences: 336
Number of extensions: 3462
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)