Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0253
         (722 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_12191| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.9  
SB_39776| Best HMM Match : Acetyltransf_1 (HMM E-Value=1e-23)          28   6.7  

>SB_12191| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 143

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 319 HNRNLFVETSESISFSVNDKEAYFSNATMYL-IKKYISSYFLLTGNGPI 462
           HN + FV+   +  +++ND    FSN  + +  K+YI  Y+  +G   +
Sbjct: 16  HNESFFVQNKLNREYAINDGLVKFSNYKITIHHKQYIQRYWQASGESDL 64


>SB_39776| Best HMM Match : Acetyltransf_1 (HMM E-Value=1e-23)
          Length = 237

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 142 LYFYIQYCYILCRLLYSNDFKVICGFI*SCFSA 44
           L  Y+  C +L  LLY N +  I  FI +C SA
Sbjct: 79  LAVYLLVCIVLVALLYINIYLQIMKFIGACLSA 111


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,498,921
Number of Sequences: 59808
Number of extensions: 323213
Number of successful extensions: 571
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)