Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0253
         (722 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            23   7.2  
AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription fact...    23   9.6  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 322 NRNLFVETSESISFSVND 375
           NR LF+ETS   + +VND
Sbjct: 159 NRLLFMETSAKTAVNVND 176


>AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription factor
           Deformed protein.
          Length = 59

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 636 AFSLHFILEISRMFHVTKYAVKCKK 710
           A++ H ILE+ + FH   Y  + ++
Sbjct: 7   AYTRHQILELEKEFHYNXYLTRRRR 31


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,027
Number of Sequences: 2352
Number of extensions: 11907
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)