Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0252
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.16 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   6.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.1  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   8.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   8.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 173 VLCNYGYHYVLLLTSPYQI*LKSTYKKNIKV-FILCIYSFF 292
           +LC Y ++Y  ++ + + + L   Y   + + F+LCIY F+
Sbjct: 110 LLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFY 150



 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 263 VFILCIYSFFSIHLFGRVATLCTCS 337
           +F+LCIY FF   +   +  L  C+
Sbjct: 161 LFLLCIYHFFCAFIIFTMHLLFCCA 185



 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 263 VFILCIYSFFSIHLFGRVATLCTC 334
           +F+ CIY F+S  +   +  L  C
Sbjct: 207 LFLPCIYYFYSAFIIFTIHLLFYC 230



 Score = 21.0 bits (42), Expect = 8.1
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 263 VFILCIYSFFSIHL 304
           + ++CIY F+ +HL
Sbjct: 253 LLLVCIYYFYYMHL 266


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 274 MYLFIFFDPFIWQSCNFMHMF 336
           M L + FD ++W S   + MF
Sbjct: 124 MVLLLLFDAYLWISSVGVRMF 144


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -3

Query: 206 KARNDTHNYIIPNNNT 159
           ++ N  +NY++ NN+T
Sbjct: 386 QSSNSRNNYVLTNNST 401


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 238 KHIQKKYKGFYSMYLFI 288
           + + K Y G YSMY  +
Sbjct: 271 QQLGKAYSGMYSMYCLL 287


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 238 KHIQKKYKGFYSMYLFI 288
           + + K Y G YSMY  +
Sbjct: 271 QQLGKAYSGMYSMYCLL 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,373
Number of Sequences: 336
Number of extensions: 2932
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)