Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0250
         (533 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical...    29   1.6  
AL032648-6|CAC35867.1|  244|Caenorhabditis elegans Hypothetical ...    29   2.8  
AF303259-1|AAG50217.1|  244|Caenorhabditis elegans 2O16 protein.       29   2.8  
AC024136-5|AAF35964.4|  257|Caenorhabditis elegans Hypothetical ...    28   3.7  
Z99276-2|CAB16482.1|  388|Caenorhabditis elegans Hypothetical pr...    28   4.8  
AL023843-2|CAA19523.1|  388|Caenorhabditis elegans Hypothetical ...    28   4.8  
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr...    27   6.4  
Z99169-1|CAB16306.2|  966|Caenorhabditis elegans Hypothetical pr...    27   8.5  
U41992-4|AAL02506.2|  876|Caenorhabditis elegans Hypothetical pr...    27   8.5  
AF026215-7|ABR92608.1|  554|Caenorhabditis elegans Hypothetical ...    27   8.5  
AB055112-1|BAB62293.1|  966|Caenorhabditis elegans VHA-7 protein.      27   8.5  

>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
            protein Y59A8B.1a protein.
          Length = 1641

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1

Query: 473  TPSVHGEPPATLVPDVVAAARQVREKRKQRPEPPSCGD*AGGTP 342
            +PS    P  TL P V+   +Q  EK+K  P PP        TP
Sbjct: 873  SPSPPPPPETTLTPIVLPRKKQRIEKKKLTPPPPQQAPVTSHTP 916


>AL032648-6|CAC35867.1|  244|Caenorhabditis elegans Hypothetical
           protein Y54G9A.7 protein.
          Length = 244

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
 Frame = +3

Query: 18  RNFEQVFVKLMR--RYKYL--EKMFEEEMKKVLVYLKGFDPEQRIK 143
           R +++ F K  +  R K L  E+ F++ MK +L  L+ F+PE+ +K
Sbjct: 127 RRYDRDFFKYQKYHREKKLKSEREFQKRMKSLLTELEAFNPEKYVK 172


>AF303259-1|AAG50217.1|  244|Caenorhabditis elegans 2O16 protein.
          Length = 244

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
 Frame = +3

Query: 18  RNFEQVFVKLMR--RYKYL--EKMFEEEMKKVLVYLKGFDPEQRIK 143
           R +++ F K  +  R K L  E+ F++ MK +L  L+ F+PE+ +K
Sbjct: 127 RRYDRDFFKYQKYHREKKLKSEREFQKRMKSLLTELEAFNPEKYVK 172


>AC024136-5|AAF35964.4|  257|Caenorhabditis elegans Hypothetical
           protein F54A3.2 protein.
          Length = 257

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -1

Query: 179 SVTDPQCSHARQLDAL--FGIEAFQVDQNLFHFLFEHFFQVLVPTHQF 42
           +V D   S   Q D +  FGI + +  + L HFL+ +F +   P  QF
Sbjct: 170 AVADTTTSERLQKDLIDWFGIPSPESKKTLLHFLYAYFCRQCTPDIQF 217


>Z99276-2|CAB16482.1|  388|Caenorhabditis elegans Hypothetical
           protein Y52D3.1a protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 13/60 (21%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
 Frame = +3

Query: 3   DMDTMRNFEQVFVKLMRR-YKYLEKMFEEEMKKVLVYLKGFDPEQRIKLARM-TALWIGN 176
           DM ++++ +++ + +  R  ++L + F +EM + +     +DP+QR   + + ++ W+G+
Sbjct: 278 DMISLKDDQKMGLDISHRPQEHLTRRFSKEMHEFIANCLDYDPQQRGSASDLKSSAWLGS 337


>AL023843-2|CAA19523.1|  388|Caenorhabditis elegans Hypothetical
           protein Y52D3.1a protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 13/60 (21%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
 Frame = +3

Query: 3   DMDTMRNFEQVFVKLMRR-YKYLEKMFEEEMKKVLVYLKGFDPEQRIKLARM-TALWIGN 176
           DM ++++ +++ + +  R  ++L + F +EM + +     +DP+QR   + + ++ W+G+
Sbjct: 278 DMISLKDDQKMGLDISHRPQEHLTRRFSKEMHEFIANCLDYDPQQRGSASDLKSSAWLGS 337


>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical
           protein F46C3.3 protein.
          Length = 2557

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = +2

Query: 314 NKGQLEGRLLEFLPLNRRS*EALGAAFSSRGLAELLRLHRAQASQEALRELTASLLEQLA 493
           N GQL+  L+ ++ +N  + + L    S     E L  +     +  L  + +  LEQ A
Sbjct: 737 NSGQLQQTLVGYIDINEDAKKFLERPTSDSDATETLTHYLTVPMKNFLSNMNSITLEQFA 796

Query: 494 EE 499
           EE
Sbjct: 797 EE 798


>Z99169-1|CAB16306.2|  966|Caenorhabditis elegans Hypothetical
           protein C26H9A.1 protein.
          Length = 966

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 15  MRNFEQVFVKLMRRYKYLEKMFEEEMKKVLVYLKGFDPE 131
           M  + + FVK MRR + +E+      K+V+    G DP+
Sbjct: 88  MSLYSRTFVKQMRRCEEMERKLRFLEKQVITCKPGLDPK 126


>U41992-4|AAL02506.2|  876|Caenorhabditis elegans Hypothetical
           protein F32E10.3 protein.
          Length = 876

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = -2

Query: 412 GKSARRESSAQSLLAAAIKREELQQSAFKLSLVERRDERGDAALLLDDR 266
           G+   ++ S++ +  A  K +++++    L L   R E GD   LLDD+
Sbjct: 419 GEEDEKDESSEKIELAPEKEDKIKEFLGVLRLFLDRAEHGDLRKLLDDQ 467


>AF026215-7|ABR92608.1|  554|Caenorhabditis elegans Hypothetical
           protein F09G2.8b protein.
          Length = 554

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = -2

Query: 409 KSARRESSAQSLLAAAIKREELQQSAFKLSLVERRDERGDAALLLDDREHFHT 251
           +  R+  S   L +  + R EL    F+ SL +   E     +L++DR   HT
Sbjct: 12  RRCRQSPSVARLESIVLNRRELLLDHFQYSLFQNSSEIPMTTILINDRPMRHT 64


>AB055112-1|BAB62293.1|  966|Caenorhabditis elegans VHA-7 protein.
          Length = 966

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 15  MRNFEQVFVKLMRRYKYLEKMFEEEMKKVLVYLKGFDPE 131
           M  + + FVK MRR + +E+      K+V+    G DP+
Sbjct: 88  MSLYSRTFVKQMRRCEEMERKLRFLEKQVITCKPGLDPK 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,689,196
Number of Sequences: 27780
Number of extensions: 211093
Number of successful extensions: 786
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)