Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0249
         (709 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P19784 Cluster: Casein kinase II subunit alpha'; n=5; E...    51   3e-05
UniRef50_Q42031 Cluster: Casein kinase II alpha chain; n=1; Arab...    38   0.18 
UniRef50_Q2HFY9 Cluster: Casein kinase II; n=1; Chaetomium globo...    35   1.7  
UniRef50_P15790 Cluster: Casein kinase II subunit alpha; n=5; Sa...    34   3.0  
UniRef50_A7TQP9 Cluster: Putative uncharacterized protein; n=1; ...    34   3.9  
UniRef50_Q00SI1 Cluster: Serin/threonin-kinase; n=1; Ostreococcu...    33   6.9  
UniRef50_Q4QFR5 Cluster: Fatty acid elongase, putative; n=6; Lei...    33   6.9  
UniRef50_UPI00006CFACC Cluster: potassium cation channel protein...    33   9.1  

>UniRef50_P19784 Cluster: Casein kinase II subunit alpha'; n=5;
           Euarchontoglires|Rep: Casein kinase II subunit alpha' -
           Homo sapiens (Human)
          Length = 350

 Score = 50.8 bits (116), Expect = 3e-05
 Identities = 20/39 (51%), Positives = 27/39 (69%)
 Frame = +3

Query: 3   YNHYARYTAREAMDHPYFYPIVKEQGRMATSNSPTPNAL 119
           Y+H  R TA+EAM+HPYFYP+VKEQ +    N+   + L
Sbjct: 308 YDHQQRLTAKEAMEHPYFYPVVKEQSQPCADNAVLSSGL 346


>UniRef50_Q42031 Cluster: Casein kinase II alpha chain; n=1;
          Arabidopsis thaliana|Rep: Casein kinase II alpha chain
          - Arabidopsis thaliana (Mouse-ear cress)
          Length = 67

 Score = 38.3 bits (85), Expect = 0.18
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = +3

Query: 3  YNHYARYTAREAMDHPYFYPI 65
          Y+H  R TA+EAM HPYFYPI
Sbjct: 13 YDHQERPTAKEAMAHPYFYPI 33


>UniRef50_Q2HFY9 Cluster: Casein kinase II; n=1; Chaetomium
           globosum|Rep: Casein kinase II - Chaetomium globosum
           (Soil fungus)
          Length = 361

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +3

Query: 3   YNHYARYTAREAMDHPYFYPI 65
           Y+H  R TA+EAM HPYF PI
Sbjct: 325 YDHAERLTAKEAMAHPYFAPI 345


>UniRef50_P15790 Cluster: Casein kinase II subunit alpha; n=5;
           Saccharomycetales|Rep: Casein kinase II subunit alpha -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 372

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 15/25 (60%), Positives = 19/25 (76%)
 Frame = +3

Query: 3   YNHYARYTAREAMDHPYFYPIVKEQ 77
           Y+H  R TA+EAM HP+F PI +EQ
Sbjct: 346 YDHQERLTAKEAMGHPWFAPI-REQ 369


>UniRef50_A7TQP9 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 380

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +3

Query: 3   YNHYARYTAREAMDHPYFYPI 65
           Y+H  R TA+EAM HP+F PI
Sbjct: 347 YDHQERLTAKEAMGHPWFAPI 367


>UniRef50_Q00SI1 Cluster: Serin/threonin-kinase; n=1; Ostreococcus
           tauri|Rep: Serin/threonin-kinase - Ostreococcus tauri
          Length = 478

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +3

Query: 18  RYTAREAMDHPYFYPIVKEQGRMATSNSPTPNALQGPVNS 137
           R T  +A+ HP+FYP+    G+M    S   NALQ  ++S
Sbjct: 410 RITPEQALAHPFFYPVA---GKMGIEGSINVNALQKRLSS 446


>UniRef50_Q4QFR5 Cluster: Fatty acid elongase, putative; n=6;
           Leishmania|Rep: Fatty acid elongase, putative -
           Leishmania major
          Length = 360

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +1

Query: 589 LHLIFCIY*PMVFGKCNYLYNILLRALHMIWNATFSSFS 705
           L+++  +Y P  F K    YN  LRAL++IWN   S FS
Sbjct: 33  LYIVMVLYVPRTFMKHRPAYN--LRALNLIWNLGLSLFS 69


>UniRef50_UPI00006CFACC Cluster: potassium cation channel protein;
           n=1; Tetrahymena thermophila SB210|Rep: potassium cation
           channel protein - Tetrahymena thermophila SB210
          Length = 800

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 20/57 (35%), Positives = 29/57 (50%)
 Frame = -1

Query: 379 VFTNYLNTKLYCLSKTYLIGITSICIVSCTE*AYLSFSLCI*KAAVSC*CFFYNVSS 209
           +FT YL T  YC+     +G   I  +S  E AY+     I  A +SC  F Y+V++
Sbjct: 73  LFTKYLTTLYYCVITMITVGYGDITPISIYEKAYV-----IGMALISCGVFAYSVNT 124


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,154,722
Number of Sequences: 1657284
Number of extensions: 13160444
Number of successful extensions: 29425
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29411
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)