Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0249
         (709 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0061 + 31352703-31353037,31353145-31353274,31353708-313539...    34   0.096
07_01_0105 - 798883-798942,799118-799186,799282-799345,799434-79...    33   0.22 
01_06_1662 - 38974803-38974895,38975118-38975256,38976044-389761...    29   4.8  
08_02_1229 + 25412692-25413102,25413252-25413425,25413538-254136...    28   6.3  

>03_06_0061 +
           31352703-31353037,31353145-31353274,31353708-31353902,
           31354696-31354725,31355238-31355395,31355756-31355846,
           31355924-31355989,31356331-31356413,31356495-31356558,
           31356641-31356709,31356798-31356833
          Length = 418

 Score = 34.3 bits (75), Expect = 0.096
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +3

Query: 3   YNHYARYTAREAMDHPYFYPI 65
           Y+H  R TA+EAM HPYF P+
Sbjct: 395 YDHQERPTAKEAMAHPYFNPV 415


>07_01_0105 -
           798883-798942,799118-799186,799282-799345,799434-799516,
           799957-800022,800143-800233,800622-800779,801144-801338,
           801499-801628,803016-803168,803877-803962
          Length = 384

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +3

Query: 3   YNHYARYTAREAMDHPYFYPI 65
           Y+H  R TAREAM HPYF  +
Sbjct: 353 YDHQDRLTAREAMAHPYFLQV 373


>01_06_1662 -
           38974803-38974895,38975118-38975256,38976044-38976117,
           38976197-38976308,38976418-38976479,38976996-38977337
          Length = 273

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 3   YNHYARYTAREAMDHPYFYPIVKEQ 77
           YN   R +A+ AM+HPYF  + K Q
Sbjct: 248 YNPANRISAKAAMEHPYFDSLDKSQ 272


>08_02_1229 +
           25412692-25413102,25413252-25413425,25413538-25413636,
           25413679-25413764,25413897-25414035,25414198-25414290
          Length = 333

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 3   YNHYARYTAREAMDHPYFYPIVKE 74
           Y    R +A++AM+HPYF  + KE
Sbjct: 308 YEPSKRISAKKAMEHPYFNDVNKE 331


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,691,048
Number of Sequences: 37544
Number of extensions: 334493
Number of successful extensions: 699
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)