Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0247
(481 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0662 + 30987187-30987277,30987825-30990214 122 2e-28
04_01_0103 + 1082077-1082167,1083037-1085477 121 4e-28
02_04_0017 + 18937774-18937864,18938505-18940945 121 4e-28
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 112 2e-25
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 94 6e-20
03_05_0511 + 25056018-25059107 93 1e-19
02_04_0148 - 20198407-20201424 90 8e-19
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 57 6e-09
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 46 2e-05
02_02_0340 + 9135846-9138377 30 1.1
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 29 2.6
06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-19... 29 2.6
07_01_0244 + 1786009-1788048 28 4.5
01_06_1496 + 37772838-37772935,37773039-37773243,37773649-377737... 27 7.9
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 122 bits (293), Expect = 2e-28
Identities = 66/100 (66%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
Frame = +3
Query: 3 KFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSYPMVQCINEESGEHIVAGAGELHLEIC 182
KFSVSPVVRVAV+ K +DLPKLVEGLKRLAKS PMV C EESGEHI+AGAGELHLEIC
Sbjct: 478 KFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTVEESGEHIIAGAGELHLEIC 537
Query: 183 LKGLEEDH-ACIPIKKSDPVVSYREP*LRNRTSSVSQSRP 299
LK L+ED I S PVVS+RE L +V P
Sbjct: 538 LKDLQEDFMGGAEITVSPPVVSFRETVLEKSCRTVMSKSP 577
Score = 103 bits (247), Expect = 8e-23
Identities = 42/64 (65%), Positives = 55/64 (85%)
Frame = +2
Query: 284 LSKSPNKHNRLFMKAQPMPDGLPEGIDEGRVNPRDDFKTRARYLTEKYGYDVTEARKIWC 463
+SKSPNKHNRL+M+A+PM +GLPE IDEGR+ PRDD K R++ L+E++G+D A+KIWC
Sbjct: 573 MSKSPNKHNRLYMEARPMEEGLPEAIDEGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWC 632
Query: 464 FGPE 475
FGPE
Sbjct: 633 FGPE 636
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 121 bits (291), Expect = 4e-28
Identities = 66/100 (66%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
Frame = +3
Query: 3 KFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSYPMVQCINEESGEHIVAGAGELHLEIC 182
KFSVSPVVRVAV+ K +DLPKLVEGLKRLAKS PMV C EESGEHI+AGAGELHLEIC
Sbjct: 482 KFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEIC 541
Query: 183 LKGLEEDH-ACIPIKKSDPVVSYREP*LRNRTSSVSQSRP 299
LK L+ED I S PVVS+RE L +V P
Sbjct: 542 LKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSP 581
Score = 97.9 bits (233), Expect = 4e-21
Identities = 39/64 (60%), Positives = 54/64 (84%)
Frame = +2
Query: 284 LSKSPNKHNRLFMKAQPMPDGLPEGIDEGRVNPRDDFKTRARYLTEKYGYDVTEARKIWC 463
+SKSPNKHNRL+M+A+P+ +GL E ID+GR+ PRDD K R++ L+E++G+D A+KIWC
Sbjct: 577 MSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWC 636
Query: 464 FGPE 475
FGPE
Sbjct: 637 FGPE 640
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 121 bits (291), Expect = 4e-28
Identities = 66/100 (66%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
Frame = +3
Query: 3 KFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSYPMVQCINEESGEHIVAGAGELHLEIC 182
KFSVSPVVRVAV+ K +DLPKLVEGLKRLAKS PMV C EESGEHI+AGAGELHLEIC
Sbjct: 482 KFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEIC 541
Query: 183 LKGLEEDH-ACIPIKKSDPVVSYREP*LRNRTSSVSQSRP 299
LK L+ED I S PVVS+RE L +V P
Sbjct: 542 LKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSP 581
Score = 97.9 bits (233), Expect = 4e-21
Identities = 39/64 (60%), Positives = 54/64 (84%)
Frame = +2
Query: 284 LSKSPNKHNRLFMKAQPMPDGLPEGIDEGRVNPRDDFKTRARYLTEKYGYDVTEARKIWC 463
+SKSPNKHNRL+M+A+P+ +GL E ID+GR+ PRDD K R++ L+E++G+D A+KIWC
Sbjct: 577 MSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWC 636
Query: 464 FGPE 475
FGPE
Sbjct: 637 FGPE 640
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 112 bits (269), Expect = 2e-25
Identities = 56/100 (56%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Frame = +3
Query: 3 KFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSYPMVQCINEESGEHIVAGAGELHLEIC 182
KFSVSPVVR +V KN ++LPKLVEGLKRLAKS P+V C EESGEH++AG G+LHLEIC
Sbjct: 484 KFSVSPVVRKSVACKNASELPKLVEGLKRLAKSDPLVVCTIEESGEHVIAGVGQLHLEIC 543
Query: 183 LKGLEEDH-ACIPIKKSDPVVSYREP*LRNRTSSVSQSRP 299
+K L+ED I P+++YRE +N +V P
Sbjct: 544 IKDLQEDFMGGAEIIVGPPIITYRETVTKNSCRTVMSKSP 583
Score = 74.5 bits (175), Expect = 4e-14
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 8/72 (11%)
Frame = +2
Query: 284 LSKSPNKHNRLFMKAQPMPD--------GLPEGIDEGRVNPRDDFKTRARYLTEKYGYDV 439
+SKSPNKHNRL+M+A+P+ L + ID+ R+ P+DD K R + L+E++G+D
Sbjct: 579 MSKSPNKHNRLYMEARPLDKEDLQQDEPSLCKAIDDERIGPKDDIKERGKILSEEFGWDK 638
Query: 440 TEARKIWCFGPE 475
A+KIW FGPE
Sbjct: 639 DLAKKIWAFGPE 650
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 93.9 bits (223), Expect = 6e-20
Identities = 40/84 (47%), Positives = 63/84 (75%)
Frame = +3
Query: 3 KFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSYPMVQCINEESGEHIVAGAGELHLEIC 182
+F+ PVV++A EP NP++LPK+VEGL++++KSYP+ EESGEH + G GEL+L+
Sbjct: 605 RFNTLPVVKIAAEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSI 664
Query: 183 LKGLEEDHACIPIKKSDPVVSYRE 254
+K L E ++ + +K +DPVV++ E
Sbjct: 665 MKDLRELYSEVEVKVADPVVTFCE 688
Score = 61.3 bits (142), Expect = 4e-10
Identities = 27/69 (39%), Positives = 40/69 (57%)
Frame = +2
Query: 269 SDQLCLSKSPNKHNRLFMKAQPMPDGLPEGIDEGRVNPRDDFKTRARYLTEKYGYDVTEA 448
S C +++PNK N++ M A+P+ GL E I+ G V+ K + ++Y +DV A
Sbjct: 694 SSMKCFAETPNKRNKITMVAEPLEKGLAEDIENGLVSLDSRQKEITDFFRQRYQWDVLAA 753
Query: 449 RKIWCFGPE 475
R IW FGPE
Sbjct: 754 RSIWAFGPE 762
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 93.1 bits (221), Expect = 1e-19
Identities = 43/83 (51%), Positives = 60/83 (72%)
Frame = +3
Query: 6 FSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSYPMVQCINEESGEHIVAGAGELHLEICL 185
F VSP+++VA+EP NPADL LV+GLK L ++ P V+ + GEH++A AGE+HLE C
Sbjct: 532 FQVSPMLKVAIEPSNPADLGALVKGLKLLNRADPFVEYTVSQRGEHVLAAAGEIHLERCK 591
Query: 186 KGLEEDHACIPIKKSDPVVSYRE 254
K LEE A + + SDP+VS++E
Sbjct: 592 KDLEERFAKVKLVVSDPLVSFKE 614
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 90.2 bits (214), Expect = 8e-19
Identities = 39/83 (46%), Positives = 61/83 (73%)
Frame = +3
Query: 6 FSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSYPMVQCINEESGEHIVAGAGELHLEICL 185
F VSP+++VA+EP NP+DL LV+GLK L ++ P ++ E GEH++A AGE+HLE C+
Sbjct: 512 FQVSPMLKVAIEPSNPSDLGALVKGLKLLNQADPFIEYTVSERGEHVLAAAGEIHLEHCI 571
Query: 186 KGLEEDHACIPIKKSDPVVSYRE 254
K L+E A + ++ S P+VS+++
Sbjct: 572 KNLQERFARVQLEVSKPLVSFKD 594
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 57.2 bits (132), Expect = 6e-09
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +3
Query: 18 PVVRVAVEPKNPADLPKLVEGLKRLAKSYPMVQ-CINEESGEHIVAGAGELHLEICLKGL 194
PV++VA+EPK AD K+ GL +LA+ P +EE+ + ++ G GELHL+I + L
Sbjct: 457 PVIKVAIEPKTKADADKMATGLIKLAQEDPSFHFSRDEETNQTVIEGMGELHLDIIVDRL 516
Query: 195 EEDHACIPIKKSDPVVSYRE 254
+ + + P V+YRE
Sbjct: 517 KREFR-VEANVGAPQVNYRE 535
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 45.6 bits (103), Expect = 2e-05
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +3
Query: 18 PVVRVAVEPKNPADLPKLVEGLKRLAKSYPMVQC-INEESGEHIVAGAGELHLEICLKGL 194
PV+ +AV P + + + L R K P + ++ ESGE I++G GELHL+I ++ +
Sbjct: 477 PVMSLAVSPISKDSGGQFSKALNRFQKEDPTFRVGLDPESGETIISGMGELHLDIYVERI 536
Query: 195 EEDHACIPIKKSDPVVSYRE 254
++ + K P V++RE
Sbjct: 537 RREYK-VDAKVGKPRVNFRE 555
>02_02_0340 + 9135846-9138377
Length = 843
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 265 LSYGSRYDTTGSDFLIGMQAWSSSRPLRQISRWSSPAPATMCS 137
L +G+ TTGSD L G+Q + R L I+ P +CS
Sbjct: 793 LIWGAVQQTTGSDVLDGLQPHYNLRALGIINHGGPTGPGWLCS 835
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -1
Query: 160 PAPATMCSPDSSLIHCTMG*DLARRLRPSTSLGRSAGFLGSTATRTT 20
P+P+ D S C G + + P+T+ AG S T +T
Sbjct: 342 PSPSEAIGTDGSSTSCGTGSSVTNAIAPATTTSTFAGLFASVTTSST 388
>06_01_0018 +
194295-194640,194679-194917,195737-195885,196248-196342,
196685-196780,197248-197399,198683-198823,199068-199319,
199463-199603,199686-200003,200146-200232,201025-202006,
202091-202179,202968-203072,203155-204306,204844-205359,
205455-205650,206299-207182
Length = 1979
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 314 LFMKAQPMPDGLPEGIDEGRVN 379
LF K Q +PDG P G+D+ ++
Sbjct: 364 LFQKLQKLPDGFPPGLDKDHLS 385
>07_01_0244 + 1786009-1788048
Length = 679
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 340 RHGLSLHEQTVVLVGRL*ETELVRFLSY 257
RHG++ ++++GRL LVR L Y
Sbjct: 397 RHGMTQFTAEIIILGRLRHRNLVRLLGY 424
>01_06_1496 +
37772838-37772935,37773039-37773243,37773649-37773742,
37773830-37773933,37774370-37774618,37774706-37774819,
37775010-37775093,37775292-37775462,37775544-37775657,
37775751-37775894
Length = 458
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +3
Query: 30 VAVEPKNPAD--LPK-LVEGLKRLAKSYPMVQCINEESGEHIV 149
+ P NP PK L+E + + K YP + +++E EHI+
Sbjct: 219 ILCSPSNPTGSVYPKELLEEIADIVKKYPRLLVLSDEIYEHII 261
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,732,384
Number of Sequences: 37544
Number of extensions: 284612
Number of successful extensions: 844
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 991020332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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