Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0244
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   3.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   5.4  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   7.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   7.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   7.1  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 393 RLCSRIHGGIFPVSNGLHILHSELHRVA 476
           R C R H  +   +  ++  H ELHR A
Sbjct: 108 RKCPRRHRPVCASNGKIYANHCELHRAA 135


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 755 SGQ*SEGLLSCDESQHSTS 699
           S Q S+GLL C  S +ST+
Sbjct: 761 SPQGSQGLLQCATSNYSTT 779



 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = -1

Query: 609 GKHFRWHLCN*AAHLIRKVFQQKLHW-G*RNRQRCFLFWLN 490
           G H+  H C       R+  QQK+ +      Q+C +  +N
Sbjct: 76  GFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRIN 116


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 433 PMDYTYYIQNFTALPYNREVKPKQEAPLP 519
           P DY Y+  + + +P +   KP   A  P
Sbjct: 279 PADYRYFCPDGSKVPIDANTKPCTWAARP 307


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 433 PMDYTYYIQNFTALPYNREVKPKQEAPLP 519
           P DY Y+  + + +P +   KP   A  P
Sbjct: 279 PADYRYFCPDGSKVPIDANTKPCTWAARP 307


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 433 PMDYTYYIQNFTALPYNREVKPKQEAPLP 519
           P DY Y+  + + +P +   KP   A  P
Sbjct: 279 PADYRYFCPDGSKVPIDANTKPCTWAARP 307


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,165
Number of Sequences: 438
Number of extensions: 4577
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)