Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0243
         (736 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   3.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   3.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   3.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   5.9  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   5.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.9  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.8  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 129 FNWGIYGGYGIAFPVGRYIPDLNIWGLNWRL 221
           F +G+    G AF  G  + +L  WG  W L
Sbjct: 263 FQYGL--SLGNAFQGGNQLANLANWGPEWNL 291


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 129 FNWGIYGGYGIAFPVGRYIPDLNIWGLNWRL 221
           F +G+    G AF  G  + +L  WG  W L
Sbjct: 264 FQYGL--SLGNAFQGGNQLANLANWGPEWNL 292


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 129 FNWGIYGGYGIAFPVGRYIPDLNIWGLNWRL 221
           F +G+    G AF  G  + +L  WG  W L
Sbjct: 264 FQYGL--SLGNAFQGGNQLANLANWGPEWNL 292


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 575 VRYNSAGDNTNGSNAD 528
           +RY  AGD  +G+ +D
Sbjct: 639 IRYMEAGDGNDGNQSD 654


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 575 VRYNSAGDNTNGSNAD 528
           +RY  AGD  +G+ +D
Sbjct: 531 IRYMEAGDGNDGNQSD 546


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -2

Query: 312 SSPMVVRSGSLSVRNVRAATPDPRLQLRSSTSASS 208
           SSP++    S+S       +P P  +L  S  ASS
Sbjct: 83  SSPILAEKVSVSPTTPPTPSPPPEERLTPSKDASS 117


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 246 PRLQLRSSTSASSDPKYSSQG 184
           P++Q  ++  A S P Y +QG
Sbjct: 174 PQVQWSATPQAGSTPTYQTQG 194


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 339 LWSLVKTCRSHNLARHLPAQD 401
           LW L K C + + A  L AQ+
Sbjct: 280 LWVLEKICTTTDAAEFLAAQE 300


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,201
Number of Sequences: 336
Number of extensions: 4064
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)