Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0242
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50301-13|AAB37054.2| 549|Caenorhabditis elegans Hypothetical p... 75 4e-14
Z73969-4|CAA98235.2| 428|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z78200-4|CAB01582.1| 289|Caenorhabditis elegans Hypothetical pr... 28 5.3
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 28 5.3
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 28 5.3
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 28 5.3
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 28 5.3
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 28 5.3
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 28 5.3
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 28 5.3
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 28 5.3
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 28 5.3
>U50301-13|AAB37054.2| 549|Caenorhabditis elegans Hypothetical
protein F20D6.11 protein.
Length = 549
Score = 75.4 bits (177), Expect = 4e-14
Identities = 37/94 (39%), Positives = 54/94 (57%)
Frame = +2
Query: 185 VESVVCQENDLKDNEMKVFDIGEAGRCL**NRRENSPLSERSSTHYGAPLINSSLGDGRL 364
VE ++ + D+ K+F++ + + L N +HY L N + GR+
Sbjct: 22 VEEILGRIEDVPPGTKKMFEVRDR-KVLVINDEGRIYAINGLCSHYNFSLENGTYAKGRI 80
Query: 365 KCPWHGACFNLKTGDIEDFPGFDSLPCYQVTVTD 466
+CP HGACFN+++GDIED+PGFDSL Y VTV D
Sbjct: 81 RCPLHGACFNVRSGDIEDYPGFDSLHSYVVTVND 114
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +1
Query: 508 TNKRIKDMGVVSPCEGSVVVIVF*RPSGATCAESLRSEGFKGRITVIAKEPHLPYD 675
+++RI+ + + C VVI+ + AT E R G I VI++E PYD
Sbjct: 128 SDRRIRHLPKMKQCNDRPVVIIGGGVATATFIEHSRLNGLITPILVISEESLPPYD 183
>Z73969-4|CAA98235.2| 428|Caenorhabditis elegans Hypothetical
protein C12D8.5 protein.
Length = 428
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +2
Query: 197 VCQENDLKDNEMKVFDIGEAGRCL**NRRENSP--LSERSSTHYGAP--LINSSLGDGRL 364
VC+ L +N+ + +I G+ L R E+ +++ H GA + + D +
Sbjct: 84 VCESEKLANNQ--IMEITVLGQFLSLIRSESGAVYITDSYCPHIGANFNIGGRVVRDNCI 141
Query: 365 KCPWHGACFNLKTGDIEDFP 424
+CP+HG F+ +TG + P
Sbjct: 142 QCPFHGWIFSAETGKCVEVP 161
>Z78200-4|CAB01582.1| 289|Caenorhabditis elegans Hypothetical
protein T04H1.5 protein.
Length = 289
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 335 INSSLGDGRLKCPWHGACFNLKTGDIEDFPG 427
IN+ L DG C W GA F+ IE PG
Sbjct: 248 INNYLRDGHFYCIWCGANFSSPEDMIEHCPG 278
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 119 CQGGSCNENRGTISRMESTNNYVESVVCQE-NDLKDNEMKV 238
CQG C+EN+ T++ E+ N + S+V E L D+ M++
Sbjct: 2116 CQG-PCHENQNTMAMQENGLNIIISLVLNEIKPLADDHMEL 2155
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 119 CQGGSCNENRGTISRMESTNNYVESVVCQE-NDLKDNEMKV 238
CQG C+EN+ T++ E+ N + S+V E L D+ M++
Sbjct: 2095 CQG-PCHENQNTMAMQENGLNIIISLVLNEIKPLADDHMEL 2134
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 119 CQGGSCNENRGTISRMESTNNYVESVVCQE-NDLKDNEMKV 238
CQG C+EN+ T++ E+ N + S+V E L D+ M++
Sbjct: 2151 CQG-PCHENQNTMAMQENGLNIIISLVLNEIKPLADDHMEL 2190
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 119 CQGGSCNENRGTISRMESTNNYVESVVCQE-NDLKDNEMKV 238
CQG C+EN+ T++ E+ N + S+V E L D+ M++
Sbjct: 2105 CQG-PCHENQNTMAMQENGLNIIISLVLNEIKPLADDHMEL 2144
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 119 CQGGSCNENRGTISRMESTNNYVESVVCQE-NDLKDNEMKV 238
CQG C+EN+ T++ E+ N + S+V E L D+ M++
Sbjct: 2105 CQG-PCHENQNTMAMQENGLNIIISLVLNEIKPLADDHMEL 2144
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 119 CQGGSCNENRGTISRMESTNNYVESVVCQE-NDLKDNEMKV 238
CQG C+EN+ T++ E+ N + S+V E L D+ M++
Sbjct: 2116 CQG-PCHENQNTMAMQENGLNIIISLVLNEIKPLADDHMEL 2155
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 119 CQGGSCNENRGTISRMESTNNYVESVVCQE-NDLKDNEMKV 238
CQG C+EN+ T++ E+ N + S+V E L D+ M++
Sbjct: 2105 CQG-PCHENQNTMAMQENGLNIIISLVLNEIKPLADDHMEL 2144
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 119 CQGGSCNENRGTISRMESTNNYVESVVCQE-NDLKDNEMKV 238
CQG C+EN+ T++ E+ N + S+V E L D+ M++
Sbjct: 2095 CQG-PCHENQNTMAMQENGLNIIISLVLNEIKPLADDHMEL 2134
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 119 CQGGSCNENRGTISRMESTNNYVESVVCQE-NDLKDNEMKV 238
CQG C+EN+ T++ E+ N + S+V E L D+ M++
Sbjct: 2151 CQG-PCHENQNTMAMQENGLNIIISLVLNEIKPLADDHMEL 2190
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,596,067
Number of Sequences: 27780
Number of extensions: 335826
Number of successful extensions: 864
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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