Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0241
         (406 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   2.0  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   2.6  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    22   2.6  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   2.6  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +1

Query: 268 KFLSRSHPLLSRMVHNDRGRRGQSKRRLPRHTGAPGD 378
           KF  +    +   +H D   R +    L  HT A GD
Sbjct: 425 KFYEQFSKNIKLGIHEDSQNRAKLSELLRYHTSASGD 461


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 346 VSSIAHAFHGRYVPFV 299
           ++ +A+ FHG + PFV
Sbjct: 203 INVMAYDFHGAFEPFV 218


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 346 VSSIAHAFHGRYVPFV 299
           ++ +A+ FHG + PFV
Sbjct: 204 INVMAYDFHGAFEPFV 219


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 346 VSSIAHAFHGRYVPFV 299
           ++ +A+ FHG + PFV
Sbjct: 204 INVMAYDFHGAFEPFV 219


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,215
Number of Sequences: 336
Number of extensions: 2222
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)