Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0241
(406 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0253 - 32666152-32666360,32666443-32666632,32666764-326668... 60 9e-10
03_06_0252 - 32656068-32656276,32656361-32656550,32656682-326567... 60 9e-10
10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234... 59 1e-09
07_01_1146 + 10756897-10757065,10763869-10765521,10765638-107659... 56 1e-08
07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,350... 54 4e-08
03_04_0157 + 17791540-17791681,17792809-17792908,17793386-177934... 40 0.001
07_01_1148 + 10781072-10781228,10781741-10781751 38 0.004
02_03_0223 + 16570264-16570357,16570470-16570552,16570974-165710... 33 0.11
04_04_1079 - 30663919-30665044,30665143-30665298,30665405-306655... 31 0.46
03_05_1014 - 29687343-29687410,29688054-29688191,29689246-296892... 29 1.8
12_01_0102 - 788403-788937,789051-789164,789323-789687 28 2.4
02_05_0298 + 27671473-27672147 28 2.4
01_06_1507 - 37838645-37839311,37839393-37839499,37839588-378396... 28 2.4
03_06_0033 - 31186076-31186189,31186274-31186396,31186524-311867... 28 3.2
04_04_0857 + 28794127-28794786 27 4.3
09_03_0130 - 12609417-12610462,12610786-12611040,12611139-126112... 27 5.6
06_01_1013 - 7931756-7935109 27 5.6
01_06_0985 - 33594588-33595451,33597655-33598518 27 5.6
11_01_0102 - 749013-749538,749630-749749,749849-750210 27 7.5
04_03_0317 + 14292003-14292632 27 7.5
09_05_0017 - 20095011-20095667 26 9.9
03_05_0848 + 28196438-28196623 26 9.9
03_01_0306 + 2391831-2391858,2392831-2392902,2393511-2393698,239... 26 9.9
01_07_0322 + 42719853-42720512 26 9.9
>03_06_0253 -
32666152-32666360,32666443-32666632,32666764-32666862,
32666999-32667094,32667408-32668361,32668683-32668901,
32669282-32669491,32669617-32669879,32670041-32671717,
32672702-32672852
Length = 1355
Score = 59.7 bits (138), Expect = 9e-10
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +2
Query: 263 AVNSCLVHILSCHEWYITTVEGVGNRRDGYHAIQERLAMFNGTXCGYC 406
+ +SCL + S H +TT EG+GN RDG+HA+Q RL+ F+ + CG+C
Sbjct: 74 SASSCLTLLGSLHHCAVTTSEGIGNSRDGFHAVQRRLSGFHASQCGFC 121
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = +3
Query: 78 TINGEQYSLXGADVSPVTSLNDYIRHHLQLHGTKAMCHEVGCXACVVSV 224
T+NGE+Y G D P T+L +++R + G K C E GC ACVV V
Sbjct: 14 TVNGERYEAVGVD--PSTTLLEFLRTRTPVRGPKLGCGEGGCGACVVVV 60
>03_06_0252 -
32656068-32656276,32656361-32656550,32656682-32656780,
32656917-32657012,32657200-32658153,32658476-32658694,
32658911-32659120,32659241-32659503,32659605-32661281,
32663639-32663792
Length = 1356
Score = 59.7 bits (138), Expect = 9e-10
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +2
Query: 263 AVNSCLVHILSCHEWYITTVEGVGNRRDGYHAIQERLAMFNGTXCGYC 406
+ +SCL + S H +TT EG+GN RDG+HA+Q RL+ F+ + CG+C
Sbjct: 75 SASSCLTLLGSLHHCAVTTSEGIGNSRDGFHAVQRRLSGFHASQCGFC 122
Score = 43.6 bits (98), Expect = 6e-05
Identities = 21/48 (43%), Positives = 28/48 (58%)
Frame = +3
Query: 81 INGEQYSLXGADVSPVTSLNDYIRHHLQLHGTKAMCHEVGCXACVVSV 224
+NGE+Y G D P T+L +++R + G K C E GC ACVV V
Sbjct: 16 VNGERYEAVGVD--PSTTLLEFLRTRTPVRGPKLGCGEGGCGACVVVV 61
>10_01_0217 +
2337950-2338085,2340766-2342436,2342636-2342898,
2343027-2343236,2343436-2343654,2344038-2345000,
2345279-2345374,2345482-2345580,2345953-2346142,
2346594-2346823
Length = 1358
Score = 59.3 bits (137), Expect = 1e-09
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = +2
Query: 257 TLAVNSCLVHILSCHEWYITTVEGVGNRRDGYHAIQERLAMFNGTXCGYC 406
+ + +SCL + S H +TT EG+GN RDG+H +Q RLA F+ + CG+C
Sbjct: 67 SFSASSCLTLLGSLHHCAVTTSEGIGNSRDGFHPVQRRLAGFHASQCGFC 116
Score = 39.1 bits (87), Expect = 0.001
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 81 INGEQYSLXGADVSPVTSLNDYIRHHLQLHGTKAMCHEVGCXACVVSV 224
+NGE+Y G D P +L +++R G K C E GC AC V V
Sbjct: 10 VNGERYEAVGVD--PSMTLLEFLRTRTPFRGPKLGCGEGGCGACAVVV 55
>07_01_1146 +
10756897-10757065,10763869-10765521,10765638-10765900,
10766057-10766266,10766818-10767036,10767379-10768344,
10768575-10768670,10768772-10768870,10769349-10769538,
10769623-10769855
Length = 1365
Score = 56.0 bits (129), Expect = 1e-08
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = +2
Query: 269 NSCLVHILSCHEWYITTVEGVGNRRDGYHAIQERLAMFNGTXCGYC 406
+SCL + S H I T EG+GN +DG+HAIQ+R++ F+ + CG+C
Sbjct: 82 SSCLTLLYSIHFCSIITTEGLGNTKDGFHAIQKRMSGFHASQCGFC 127
Score = 53.2 bits (122), Expect = 8e-08
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +3
Query: 60 MDKINFTINGEQYSLXGADVSPVTSLNDYIRHHLQLHGTKAMCHEVGCXACVVSVQLTHP 239
++++ F +NGE+ + ADV P T+L ++IR G K C E GC ACV+ + +P
Sbjct: 12 VERVVFALNGERQEVAAADVDPSTTLLEFIRTRTPFKGPKLGCGEGGCGACVILIAKYNP 71
Query: 240 TT 245
T
Sbjct: 72 KT 73
>07_01_0464 -
3504264-3504475,3504842-3505031,3505310-3505408,
3505561-3505653,3505926-3506891,3507267-3507485,
3508038-3508247,3508371-3508630,3508956-3510737,
3510796-3511009
Length = 1414
Score = 54.0 bits (124), Expect = 4e-08
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = +2
Query: 263 AVNSCLVHILSCHEWYITTVEGVGNRRDGYHAIQERLAMFNGTXCGYC 406
AV+SCL H +TT EG+G+ R G HA+ ERLA F+ + CG+C
Sbjct: 95 AVSSCLTLARGLHHRAVTTTEGLGSSRRGLHALHERLAGFHASQCGFC 142
>03_04_0157 +
17791540-17791681,17792809-17792908,17793386-17793477,
17793562-17793620,17794135-17795637,17796478-17796720,
17796831-17797145,17797571-17797573,17798399-17798638,
17798975-17799259,17799335-17799556,17800105-17800266,
17800411-17800545,17802452-17802688,17802787-17802960,
17803692-17803934
Length = 1384
Score = 39.5 bits (88), Expect = 0.001
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 14/68 (20%)
Frame = +2
Query: 245 QKGETLAVNSCLVHILSCHEWYITTVEGVGNR-RDGYHAI-------------QERLAMF 382
+K + A+N+CL + S +I TVEG+GNR R ++ + +ERLAM
Sbjct: 78 KKTQHFAINACLAPLYSVEGMHIITVEGIGNRQRAVWNYLCDEVVTCWLKTLRKERLAMA 137
Query: 383 NGTXCGYC 406
+G+ CG+C
Sbjct: 138 HGSQCGFC 145
Score = 34.7 bits (76), Expect = 0.028
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +3
Query: 132 SLNDYIRHHLQLHGTKAMCHEVGCXACVVSVQLTHPTTKK 251
+L Y+R + L GTK C E GC AC V V TTKK
Sbjct: 41 TLLQYLRD-IGLPGTKLGCGEGGCGACTVMVSCYDQTTKK 79
>07_01_1148 + 10781072-10781228,10781741-10781751
Length = 55
Score = 37.5 bits (83), Expect = 0.004
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 60 MDKINFTINGEQYSLXGADVSPVTSLNDYIRHHLQLHGTKAMCHE 194
++++ F +NGE+ + ADV P T+L ++IR G K C E
Sbjct: 8 VERVVFELNGERQEVAAADVEPSTTLLEFIRTRTPFRGPKLGCGE 52
>02_03_0223 +
16570264-16570357,16570470-16570552,16570974-16571032,
16571607-16571665,16572276-16572325,16573575-16573612,
16574619-16574695,16575593-16576503
Length = 456
Score = 32.7 bits (71), Expect = 0.11
Identities = 29/77 (37%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 157 TSNFMVRRRCATKSAVGHAWS-LFS*HIPPPKRRNSRCKFLSRSHPLLSRMVHNDRGRRG 333
+SN RC T G A S FS PPP RR SR LS P ++R RR
Sbjct: 196 SSNAAALLRCPTLPRKGRAASNTFSDCTPPPPRRPSRRGCLS-WRPTMTRRASGSSLRRA 254
Query: 334 QSKRRLPRHTGAPGDVQ 384
PRH GA Q
Sbjct: 255 PPPPTSPRH-GASDPAQ 270
>04_04_1079 - 30663919-30665044,30665143-30665298,30665405-30665563,
30665640-30665770,30666230-30666315,30666607-30666673,
30666944-30667023,30667173-30667260,30667380-30667428,
30667516-30667608,30667725-30667808,30667986-30668044,
30668293-30668327,30668416-30668718,30669111-30669275,
30669701-30669780,30670932-30671003,30671143-30671234,
30671359-30671433,30671552-30671688,30671763-30671890,
30671942-30672033,30672473-30672808
Length = 1230
Score = 30.7 bits (66), Expect = 0.46
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 283 SHPLLSRMVHNDRGRRGQSKRRLPRHTGAPGDVQRDSXRI 402
+HP R+V R +RG+ ++ R TG PG+ +D ++
Sbjct: 1013 AHPTAPRVVRRSRAQRGKWLAKIDRETG-PGETGQDDKKL 1051
>03_05_1014 - 29687343-29687410,29688054-29688191,29689246-29689294,
29689623-29689728,29690184-29690332,29690840-29690921,
29691308-29691360,29691644-29691729,29691855-29691909,
29692179-29692579,29693564-29693660,29694191-29694322,
29694426-29694476,29694659-29694751,29694917-29694992,
29695711-29695856,29696009-29696043,29696056-29696107,
29696290-29696401,29696617-29696813,29697456-29697560,
29697667-29697819,29698317-29698424,29698608-29698752,
29699374-29699432,29701397-29701441,29701677-29701730,
29701901-29702113,29702873-29702958,29704492-29704572,
29704670-29704729,29705599-29705644,29706212-29706286,
29706376-29706512,29708306-29708366,29708726-29708743,
29709710-29709743,29709811-29709902,29709997-29710029
Length = 1260
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 264 ARVSPFWWWDVSAEQRPRMPXSRL 193
A ++ F WW V +E PR+P S L
Sbjct: 1023 ATIAGFVWWFVYSEDGPRLPYSEL 1046
>12_01_0102 - 788403-788937,789051-789164,789323-789687
Length = 337
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 311 CTIRDRRGCERDKNLQRE 258
CT RD RGC+ K +Q+E
Sbjct: 165 CTYRDDRGCQATKQIQQE 182
>02_05_0298 + 27671473-27672147
Length = 224
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 241 PPKRRNSRCKFLSRSHPLLSRMVHNDRGR 327
PPKRR R KF HP+ + + GR
Sbjct: 37 PPKRRAGRTKFKETRHPVFKGVRRRNPGR 65
>01_06_1507 - 37838645-37839311,37839393-37839499,37839588-37839663,
37839747-37839869,37840051-37840208,37840311-37840385,
37840466-37840506,37840594-37840670,37840755-37840883,
37840990-37841060,37841237-37841332,37841489-37841584,
37841681-37841953,37842871-37842957,37843101-37843178,
37843350-37843514,37843622-37843768,37843921-37843983,
37844082-37844201,37844352-37844543,37844672-37844748,
37845094-37845196,37845684-37845887
Length = 1074
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 192 RGTSPSYHEVGGDA*CSHSVTSLG 121
RG P YH+ GG++ SHS S G
Sbjct: 967 RGRVPPYHQSGGNSYQSHSAPSAG 990
>03_06_0033 -
31186076-31186189,31186274-31186396,31186524-31186718,
31186805-31186930,31187024-31187186,31187270-31187405,
31187557-31187916,31188026-31188124,31188222-31188489
Length = 527
Score = 27.9 bits (59), Expect = 3.2
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 84 NGEQYSLXGADVSPVTSLNDYIRHHLQLHGTKAMCHEVGCXACVVSVQL-THPTT 245
N Y GAD+ T ++I HL L KA HE +V++Q+ T+P T
Sbjct: 297 NCSPYIPIGADMFACTRKINHIAQHLALPSLKA--HETFPSLLIVNIQMPTYPAT 349
>04_04_0857 + 28794127-28794786
Length = 219
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 241 PPKRRNSRCKFLSRSHPLLSRMVHNDRGR 327
PPKRR R KF HP+ + + GR
Sbjct: 35 PPKRRAGRTKFKETRHPVYKGVRSRNPGR 63
>09_03_0130 -
12609417-12610462,12610786-12611040,12611139-12611253,
12611376-12611428,12611854-12612114,12612252-12612302,
12612412-12612660,12612779-12613007,12613292-12613666
Length = 877
Score = 27.1 bits (57), Expect = 5.6
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 96 YSLXGADVSPVTSLND-YIRHHLQLHGTKAMCHEVGCXACVVSVQ 227
Y+L D+S V + N YI Q +G KA GC C+ +
Sbjct: 347 YNLAKYDISVVRAFNPVYIYLFFQTNGIKAWSALGGCVLCITGAE 391
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 27.1 bits (57), Expect = 5.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 165 LHGTKAMCHEVGCXACVVSVQ 227
+H K CHE C CVV V+
Sbjct: 447 VHRCKVTCHEGDCPPCVVRVE 467
>01_06_0985 - 33594588-33595451,33597655-33598518
Length = 575
Score = 27.1 bits (57), Expect = 5.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 252 PFWWWDVSAEQRPRMPXSRLRGTSPSYHEV 163
PFW WDV + RMP +SP Y ++
Sbjct: 221 PFWSWDV--PEGMRMPLQFANASSPLYDQM 248
>11_01_0102 - 749013-749538,749630-749749,749849-750210
Length = 335
Score = 26.6 bits (56), Expect = 7.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 311 CTIRDRRGCERDKNLQRE 258
CT RD RGC+ K +Q++
Sbjct: 166 CTYRDDRGCQATKQIQQK 183
>04_03_0317 + 14292003-14292632
Length = 209
Score = 26.6 bits (56), Expect = 7.5
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +3
Query: 81 INGEQYSLXGADVSPVTSLNDYIRHHLQLHGTK-AMCHEVGCXACVVSVQLTHPTTKKEK 257
ING + SL G + +TSL HL++ + E G VS+ T ++E
Sbjct: 117 INGHRPSLEGLTIEQITSLGWMANAHLKIVNDRLKKLREEGLIPASVSLSSTEVPIQREG 176
Query: 258 L 260
L
Sbjct: 177 L 177
>09_05_0017 - 20095011-20095667
Length = 218
Score = 26.2 bits (55), Expect = 9.9
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 241 PPKRRNSRCKFLSRSHPLLSRMVHNDRGRRGQSKR 345
PPKR R KF HP+ R V GR G + R
Sbjct: 15 PPKRPAGRTKFRETRHPVY-RGVRRRGGRPGAAGR 48
>03_05_0848 + 28196438-28196623
Length = 61
Score = 26.2 bits (55), Expect = 9.9
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +1
Query: 244 PKRRNSRCKFLSRSHPLLSRMVHND--RGRRGQSKRRLPRHTG 366
P+ SR K +RSH L R++ D +G+R ++ RR RH G
Sbjct: 12 PETHISRRKTPARSHQL--RLLQRDAGQGKRHRAARRRYRHRG 52
>03_01_0306 +
2391831-2391858,2392831-2392902,2393511-2393698,
2394143-2394203,2394306-2394368,2394396-2394474,
2394557-2394689,2394727-2394934,2398088-2398143,
2398252-2400030,2400128-2400281,2400467-2401125
Length = 1159
Score = 26.2 bits (55), Expect = 9.9
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = -1
Query: 289 DVNETRIYSESFSFLVVGCVS 227
D+N R++S +F + V+GC++
Sbjct: 208 DLNAFRLHSHAFVYFVIGCLA 228
>01_07_0322 + 42719853-42720512
Length = 219
Score = 26.2 bits (55), Expect = 9.9
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 232 HIPPPKRRNSRCKFLSRSHPLLSRMVHNDRGRRGQSKRRLPR 357
H PPKRR R KF HP+ + G R + R P+
Sbjct: 26 HRLPPKRRAGRKKFRETRHPVYRGVRARAGGSRWVCEVREPQ 67
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,390,218
Number of Sequences: 37544
Number of extensions: 264647
Number of successful extensions: 724
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 706675332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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