Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0241
(406 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g43600.1 68416.m04639 aldehyde oxidase, putative identical to... 60 6e-10
At5g20960.2 68418.m02492 aldehyde oxidase 1 (AAO1) identical to ... 56 9e-09
At5g20960.1 68418.m02491 aldehyde oxidase 1 (AAO1) identical to ... 56 9e-09
At4g34890.1 68417.m04948 xanthine dehydrogenase, putative simila... 54 5e-08
At4g34900.1 68417.m04949 xanthine dehydrogenase, putative simila... 53 6e-08
At2g27150.1 68415.m03263 aldehyde oxidase 3 (AAO3) identical to ... 52 1e-07
At1g04580.1 68414.m00451 aldehyde oxidase, putative similar to a... 52 2e-07
At5g64200.2 68418.m08063 arginine/serine-rich splicing factor SC... 29 0.89
At5g64200.1 68418.m08062 arginine/serine-rich splicing factor SC... 29 0.89
At1g50780.1 68414.m05711 hypothetical protein weak similarity to... 29 1.6
At2g47460.1 68415.m05923 myb family transcription factor (MYB12)... 27 3.6
At1g74180.1 68414.m08591 leucine-rich repeat family protein cont... 27 4.8
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 27 6.3
At5g11700.1 68418.m01367 glycine-rich protein predicted protein,... 26 8.3
At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR ... 26 8.3
>At3g43600.1 68416.m04639 aldehyde oxidase, putative identical to
gi: 3172025; identical to cDNA putative aldehyde oxidase
(AO3) mRNA, partial cds GI:2792303
Length = 1321
Score = 60.1 bits (139), Expect = 6e-10
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +2
Query: 245 QKGETLAVNSCLVHILSCHEWYITTVEGVGNRRDGYHAIQERLAMFNGTXCGYC 406
QK E V+SCL + S + ITT EG+GN RDG+H I +RL+ F+ + CG+C
Sbjct: 62 QKVEDFTVSSCLTLLCSVNHCNITTSEGLGNSRDGFHPIHKRLSGFHASQCGFC 115
Score = 48.0 bits (109), Expect = 2e-06
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +3
Query: 75 FTINGEQYSLXGADVSPVTSLNDYIRHHLQLHGTKAMCHEVGCXACVVSVQLTHPTTKK 251
F ING+++ L + V P T+L +++R+ K C E GC ACVV + P +K
Sbjct: 5 FAINGQRFELELSSVDPSTTLLEFLRYQTSFKSVKLSCGEGGCGACVVLLSKFDPVLQK 63
>At5g20960.2 68418.m02492 aldehyde oxidase 1 (AAO1) identical to
aldehyde oxidase AAO1 from Arabidopsis thaliana
[gi:3172023] isoform contains a GA-donor splice site at
intron 10
Length = 1368
Score = 56.0 bits (129), Expect = 9e-09
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = +2
Query: 245 QKGETLAVNSCLVHILSCHEWYITTVEGVGNRRDGYHAIQERLAMFNGTXCGYC 406
+K + ++SCL + S ITT +G+GN R G+HA+ ER+A F+ T CG+C
Sbjct: 80 EKVDEFTISSCLTLLCSIDGCSITTSDGLGNSRVGFHAVHERIAGFHATQCGFC 133
Score = 46.8 bits (106), Expect = 6e-06
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +3
Query: 75 FTINGEQYSLXGADVSPVTSLNDYIRHHLQLHGTKAMCHEVGCXACVVSVQLTHPTTKK 251
F ING+++ L + + P T+L D++R+ K C E GC ACVV + P +K
Sbjct: 23 FAINGQRFELELSSIDPSTTLVDFLRNKTPFKSVKLGCGEGGCGACVVLLSKYDPLLEK 81
>At5g20960.1 68418.m02491 aldehyde oxidase 1 (AAO1) identical to
aldehyde oxidase AAO1 from Arabidopsis thaliana
[gi:3172023] isoform contains a GA-donor splice site at
intron 10
Length = 1368
Score = 56.0 bits (129), Expect = 9e-09
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = +2
Query: 245 QKGETLAVNSCLVHILSCHEWYITTVEGVGNRRDGYHAIQERLAMFNGTXCGYC 406
+K + ++SCL + S ITT +G+GN R G+HA+ ER+A F+ T CG+C
Sbjct: 80 EKVDEFTISSCLTLLCSIDGCSITTSDGLGNSRVGFHAVHERIAGFHATQCGFC 133
Score = 46.8 bits (106), Expect = 6e-06
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +3
Query: 75 FTINGEQYSLXGADVSPVTSLNDYIRHHLQLHGTKAMCHEVGCXACVVSVQLTHPTTKK 251
F ING+++ L + + P T+L D++R+ K C E GC ACVV + P +K
Sbjct: 23 FAINGQRFELELSSIDPSTTLVDFLRNKTPFKSVKLGCGEGGCGACVVLLSKYDPLLEK 81
>At4g34890.1 68417.m04948 xanthine dehydrogenase, putative similar
to xanthine dehydrogenase from Gallus gallus, PIR:XOCHDH
[SP|P47990]; contains Pfam profile PF02738 Aldehyde
oxidase and xanthine dehydrogenase, molybdopterin
binding domain
Length = 1361
Score = 53.6 bits (123), Expect = 5e-08
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Frame = +2
Query: 215 GLCSAD-TSHHQKGET---LAVNSCLVHILSCHEWYITTVEGVGNRRDGYHAIQERLAMF 382
G C+ +S+ +K +T AVN+CL + S ++ ++EG+G+R+ G H +QE LA
Sbjct: 59 GACTVMVSSYDRKSKTSVHYAVNACLAPLYSVEGMHVISIEGLGHRKLGLHPVQESLASS 118
Query: 383 NGTXCGYC 406
+G+ CG+C
Sbjct: 119 HGSQCGFC 126
Score = 30.3 bits (65), Expect = 0.51
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 132 SLNDYIRHHLQLHGTKAMCHEVGCXACVVSV 224
+L +Y+R L L GTK C E GC AC V V
Sbjct: 36 TLLEYLRD-LGLTGTKLGCGEGGCGACTVMV 65
>At4g34900.1 68417.m04949 xanthine dehydrogenase, putative similar
to xanthine dehydrogenase from Gallus gallus, PIR:XOCHDH
[SP|P47990], from Calliphora vicina [SP|P08793];
contains Pfam profile PF02738 Aldehyde oxidase and
xanthine dehydrogenase, molybdopterin binding domain
Length = 1364
Score = 53.2 bits (122), Expect = 6e-08
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +2
Query: 263 AVNSCLVHILSCHEWYITTVEGVGNRRDGYHAIQERLAMFNGTXCGYC 406
AVN+CL + S ++ ++EGVG+R+ G H +QE LA +G+ CG+C
Sbjct: 82 AVNACLAPLYSVEGMHVISIEGVGHRKLGLHPLQESLASSHGSQCGFC 129
Score = 26.2 bits (55), Expect = 8.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 132 SLNDYIRHHLQLHGTKAMCHEVGCXACVVSV 224
+L +Y+R L GTK C E GC +C V V
Sbjct: 28 TLLEYLRG---LTGTKLGCGEGGCGSCTVMV 55
>At2g27150.1 68415.m03263 aldehyde oxidase 3 (AAO3) identical to
GP:3172044:gnl:PID:d1029570:AB010080
Length = 1332
Score = 52.0 bits (119), Expect = 1e-07
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +2
Query: 266 VNSCLVHILSCHEWYITTVEGVGNRRDGYHAIQERLAMFNGTXCGYC 406
+NSCL + S + ITT EG+GN + G+H I +R A F+ + CG+C
Sbjct: 67 INSCLTLLCSVNGCSITTSEGLGNTKKGFHPIHKRFAGFHASQCGFC 113
Score = 39.9 bits (89), Expect = 6e-04
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +3
Query: 69 INFTINGEQYSLXGADVSPVTSLNDYIRHHLQLHGTKAMCHEVGCXACVVSVQLTHPTTK 248
+ F +NGE++ + D P T+L +++R + K C E GC AC+V + P
Sbjct: 3 LEFAVNGERFKIDSVD--PSTTLLEFLRLNTPFKSVKLGCGEGGCGACLVVLSKYDPELD 60
Query: 249 KEK 257
+ K
Sbjct: 61 QVK 63
>At1g04580.1 68414.m00451 aldehyde oxidase, putative similar to
aldehyde oxidases from Arabidopsis thaliana: GI:3172023,
GI:3172025, GI:3172044; identical to cDNA putative
aldehyde oxidase (AO2) mRNA, partial cds GI:2792305
Length = 1337
Score = 51.6 bits (118), Expect = 2e-07
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +2
Query: 254 ETLAVNSCLVHILSCHEWYITTVEGVGNRRDGYHAIQERLAMFNGTXCGYC 406
E ++NSCL + S + ITT +G+GN G+H I +R A F+ + CG+C
Sbjct: 66 EEYSINSCLTLLCSLNGCSITTSDGLGNTEKGFHPIHKRFAGFHASQCGFC 116
Score = 41.1 bits (92), Expect = 3e-04
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +3
Query: 63 DKINFTINGEQYSLXGADVSPVTSLNDYIRHHLQLHGTKAMCHEVGCXACVVSVQLTHP 239
D + F +NGE++ + V+P T+L +++R + K C E GC AC+V + P
Sbjct: 4 DDLVFAVNGEKFEVLS--VNPSTTLLEFLRSNTCFKSVKLSCGEGGCGACIVILSKYDP 60
>At5g64200.2 68418.m08063 arginine/serine-rich splicing factor SC35
contains similarity to splicing factor; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 303
Score = 29.5 bits (63), Expect = 0.89
Identities = 23/54 (42%), Positives = 27/54 (50%)
Frame = +1
Query: 238 PPPKRRNSRCKFLSRSHPLLSRMVHNDRGRRGQSKRRLPRHTGAPGDVQRDSXR 399
PPPK R SR SRS P SR + R R +RR PR + +P RD R
Sbjct: 109 PPPKSRRSR----SRS-PRRSR---SPRRSRSPPRRRSPRRSRSPRRRSRDDYR 154
>At5g64200.1 68418.m08062 arginine/serine-rich splicing factor SC35
contains similarity to splicing factor; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 303
Score = 29.5 bits (63), Expect = 0.89
Identities = 23/54 (42%), Positives = 27/54 (50%)
Frame = +1
Query: 238 PPPKRRNSRCKFLSRSHPLLSRMVHNDRGRRGQSKRRLPRHTGAPGDVQRDSXR 399
PPPK R SR SRS P SR + R R +RR PR + +P RD R
Sbjct: 109 PPPKSRRSR----SRS-PRRSR---SPRRSRSPPRRRSPRRSRSPRRRSRDDYR 154
>At1g50780.1 68414.m05711 hypothetical protein weak similarity to
aldehyde oxidase [Arabidopsis thaliana] GI:3172025
Length = 323
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +3
Query: 123 PVTSLNDYI---RHHLQLHGTKAMCHEVGCXACVVSVQLTH 236
P + +N+++ R+ K C E GC ACVV + H
Sbjct: 21 PYSDVNNFVGVLRYQTSFKSVKLSCGEGGCGACVVLLSNQH 61
>At2g47460.1 68415.m05923 myb family transcription factor (MYB12)
similar to myb-related DNA-binding protein GI:1020155
from [Arabidopsis thaliana]
Length = 371
Score = 27.5 bits (58), Expect = 3.6
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 196 SAVGHAWSLFS*HIPPPKRRNSRCKFLSRSHPLLSRMVHN 315
S +G+ WSL + H+ P R ++ K SH LSR +HN
Sbjct: 83 STLGNRWSLIAGHL--PGRTDNEIKNYWNSH--LSRKLHN 118
>At1g74180.1 68414.m08591 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
esculentum] gi|3894387|gb|AAC78593
Length = 951
Score = 27.1 bits (57), Expect = 4.8
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +2
Query: 173 YEGDVPRSRLXGMRGLCSADTSHHQ-KGETLAVNSCLVH--ILSCHEWYITTVEGVGNR 340
+ G++PRS L G L + SH+ G L + + L +L H T GVG R
Sbjct: 465 FSGELPRSLLTGCFSLITLQLSHNSFSGPILPIQTRLTSLIVLRMHNNLFTGEIGVGLR 523
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 26.6 bits (56), Expect = 6.3
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 117 VSPVTSLNDYIRHHL--QLHGTKAMCHEVGCXACVVSV 224
+ P+ S ++ R L +LH MCH C C+V V
Sbjct: 497 LDPIPSCSNVCRKLLPCRLHTCNEMCHAGDCPPCLVQV 534
>At5g11700.1 68418.m01367 glycine-rich protein predicted protein,
Arabidopsis thaliana
Length = 1411
Score = 26.2 bits (55), Expect = 8.3
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 353 HAIQERLAMFNGTXCGYC 406
H I+ LA F T CGYC
Sbjct: 1166 HGIRVDLAWFQTTACGYC 1183
>At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 874
Score = 26.2 bits (55), Expect = 8.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 235 IPPPKRRNSRCKFLSRSHPLLSRM 306
IP PKR S+ F SRS+ + +M
Sbjct: 277 IPVPKRNGSKIAFTSRSNEVCGKM 300
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,631,865
Number of Sequences: 28952
Number of extensions: 196819
Number of successful extensions: 454
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 595686720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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