Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0240
         (794 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061085-1|AAL28633.1|  491|Drosophila melanogaster LD07362p pro...   105   5e-23
AE014297-1514|AAF54806.2|  491|Drosophila melanogaster CG5663-PA...   105   5e-23
AY069164-1|AAL39309.1|  545|Drosophila melanogaster GH19483p pro...    49   8e-06
AE014298-2972|AAF45368.1|  545|Drosophila melanogaster CG9581-PA...    49   8e-06
BT001331-1|AAN71086.1|  559|Drosophila melanogaster AT18731p pro...    39   0.009
AE014296-3710|AAN12200.1|  534|Drosophila melanogaster CG32454-P...    39   0.009
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA...    29   5.5  
BT009982-1|AAQ22451.1| 1272|Drosophila melanogaster RE53634p pro...    29   7.3  
BT004494-1|AAO42658.1| 1113|Drosophila melanogaster GH24302p pro...    29   7.3  
AE014296-3314|AAF49041.3| 1272|Drosophila melanogaster CG32227-P...    29   7.3  
AE014296-2185|AAN11856.1| 1047|Drosophila melanogaster CG32106-P...    29   7.3  
AY071585-1|AAL49207.1|  486|Drosophila melanogaster RE64043p pro...    29   9.7  
AE014296-1315|AAS65064.1|  486|Drosophila melanogaster CG32373-P...    29   9.7  
AE014296-1314|AAN12048.1|  486|Drosophila melanogaster CG32373-P...    29   9.7  

>AY061085-1|AAL28633.1|  491|Drosophila melanogaster LD07362p
           protein.
          Length = 491

 Score =  105 bits (253), Expect = 5e-23
 Identities = 61/170 (35%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
 Frame = +1

Query: 1   VGGCRHVSYTCICRSGHNAATLHYGHAGHS*QQDYXXXXXXXXXXXXXXXXXXXXXXXXF 180
           VGGCRH SYTCIC SG N++ LHYGHAG    +                          F
Sbjct: 236 VGGCRHASYTCICGSGTNSSILHYGHAGAPNSKPVQDGDLCLFDMGANYCGYAADITCTF 295

Query: 181 PG*REIYGGSKIDL*SCALCQRCR*REAKPGVFWHEMHLTANRAMLAHLKMGGLLQGDIE 360
           P   +     K    +    +      A+ GV W +MH  A R +L  LK GG+L+GD+E
Sbjct: 296 PANGKFTDDQKFIYNAVLDARNAVTESARDGVSWVDMHKLAGRVLLQRLKEGGMLKGDVE 355

Query: 361 EMIRNGVNGILQPXXXXXXXXXXXXXXXXYLPNCPPRMTGP-LAKLRTAR 507
           EM+  GV+G+ QP                YLP  P R + P L+KLR AR
Sbjct: 356 EMLEAGVSGVFQPHGLGHLIGLDVHDVGGYLPKEPKRPSEPWLSKLRFAR 405



 Score = 99.1 bits (236), Expect = 6e-21
 Identities = 44/59 (74%), Positives = 49/59 (83%)
 Frame = +2

Query: 83  GTPNSKIIVDGDISLFDMGGNYAGYAADITCSFPANGKFTEDQKLIYEAVLFARDAVKE 259
           G PNSK + DGD+ LFDMG NY GYAADITC+FPANGKFT+DQK IY AVL AR+AV E
Sbjct: 263 GAPNSKPVQDGDLCLFDMGANYCGYAADITCTFPANGKFTDDQKFIYNAVLDARNAVTE 321



 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 45/81 (55%), Positives = 56/81 (69%)
 Frame = +3

Query: 501 SQTLLAGMVLTVEPGCYFIPRLLDSARNNPEQSRFFNWHRVERFIGFGGVRIEDDVLITD 680
           ++ L AGM +T+EPGCYFI  L+D A  +P  ++F N     RF  FGGVRIEDDVLIT 
Sbjct: 404 ARILKAGMYVTIEPGCYFINWLMDRALADPNIAKFINAEMFNRFRNFGGVRIEDDVLITK 463

Query: 681 DGVENLTFVPRTVQEIEEFMS 743
            GVEN   VPRTV++IE  M+
Sbjct: 464 TGVENFAIVPRTVEDIEATMT 484


>AE014297-1514|AAF54806.2|  491|Drosophila melanogaster CG5663-PA
           protein.
          Length = 491

 Score =  105 bits (253), Expect = 5e-23
 Identities = 61/170 (35%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
 Frame = +1

Query: 1   VGGCRHVSYTCICRSGHNAATLHYGHAGHS*QQDYXXXXXXXXXXXXXXXXXXXXXXXXF 180
           VGGCRH SYTCIC SG N++ LHYGHAG    +                          F
Sbjct: 236 VGGCRHASYTCICGSGTNSSILHYGHAGAPNSKPVQDGDLCLFDMGANYCGYAADITCTF 295

Query: 181 PG*REIYGGSKIDL*SCALCQRCR*REAKPGVFWHEMHLTANRAMLAHLKMGGLLQGDIE 360
           P   +     K    +    +      A+ GV W +MH  A R +L  LK GG+L+GD+E
Sbjct: 296 PANGKFTDDQKFIYNAVLDARNAVTESARDGVSWVDMHKLAGRVLLQRLKEGGMLKGDVE 355

Query: 361 EMIRNGVNGILQPXXXXXXXXXXXXXXXXYLPNCPPRMTGP-LAKLRTAR 507
           EM+  GV+G+ QP                YLP  P R + P L+KLR AR
Sbjct: 356 EMLEAGVSGVFQPHGLGHLIGLDVHDVGGYLPKEPKRPSEPWLSKLRFAR 405



 Score = 99.1 bits (236), Expect = 6e-21
 Identities = 44/59 (74%), Positives = 49/59 (83%)
 Frame = +2

Query: 83  GTPNSKIIVDGDISLFDMGGNYAGYAADITCSFPANGKFTEDQKLIYEAVLFARDAVKE 259
           G PNSK + DGD+ LFDMG NY GYAADITC+FPANGKFT+DQK IY AVL AR+AV E
Sbjct: 263 GAPNSKPVQDGDLCLFDMGANYCGYAADITCTFPANGKFTDDQKFIYNAVLDARNAVTE 321



 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 45/81 (55%), Positives = 56/81 (69%)
 Frame = +3

Query: 501 SQTLLAGMVLTVEPGCYFIPRLLDSARNNPEQSRFFNWHRVERFIGFGGVRIEDDVLITD 680
           ++ L AGM +T+EPGCYFI  L+D A  +P  ++F N     RF  FGGVRIEDDVLIT 
Sbjct: 404 ARILKAGMYVTIEPGCYFINWLMDRALADPNIAKFINAEMFNRFRNFGGVRIEDDVLITK 463

Query: 681 DGVENLTFVPRTVQEIEEFMS 743
            GVEN   VPRTV++IE  M+
Sbjct: 464 TGVENFAIVPRTVEDIEATMT 484


>AY069164-1|AAL39309.1|  545|Drosophila melanogaster GH19483p
           protein.
          Length = 545

 Score = 48.8 bits (111), Expect = 8e-06
 Identities = 20/45 (44%), Positives = 31/45 (68%)
 Frame = +2

Query: 92  NSKIIVDGDISLFDMGGNYAGYAADITCSFPANGKFTEDQKLIYE 226
           NS+++   D+ L D G  Y GY +DIT ++PA+G FTE Q+ +Y+
Sbjct: 340 NSQLLGQQDLVLMDAGCEYGGYTSDITRTWPASGVFTEPQRTLYD 384



 Score = 31.5 bits (68), Expect = 1.4
 Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
 Frame = +3

Query: 399 SRFRPFVRTGRARCGRISA*LSSEDDWPSGQTTHSQTLLAGMVLTVEPGCYFIPRLLDSA 578
           S ++  V  G   C    +     D   +     +  ++ GMV TVEPG Y      D  
Sbjct: 431 SEYKELVSQGYRFCPHHVSHYLGMDVHDTPHVPRNTRIVPGMVFTVEPGIYIGQ---DCG 487

Query: 579 RNNPEQSRFFNWHRVERFIGFGGVRIEDDVLITDDG-VENLTFV----PRTVQEI 728
              PE            F G G +RIEDD+LI ++G VE LT      PR +QE+
Sbjct: 488 DVPPE------------FRGIG-IRIEDDLLINENGHVEVLTEACVKDPRALQEL 529


>AE014298-2972|AAF45368.1|  545|Drosophila melanogaster CG9581-PA
           protein.
          Length = 545

 Score = 48.8 bits (111), Expect = 8e-06
 Identities = 20/45 (44%), Positives = 31/45 (68%)
 Frame = +2

Query: 92  NSKIIVDGDISLFDMGGNYAGYAADITCSFPANGKFTEDQKLIYE 226
           NS+++   D+ L D G  Y GY +DIT ++PA+G FTE Q+ +Y+
Sbjct: 340 NSQLLGQQDLVLMDAGCEYGGYTSDITRTWPASGVFTEPQRTLYD 384



 Score = 31.5 bits (68), Expect = 1.4
 Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
 Frame = +3

Query: 399 SRFRPFVRTGRARCGRISA*LSSEDDWPSGQTTHSQTLLAGMVLTVEPGCYFIPRLLDSA 578
           S ++  V  G   C    +     D   +     +  ++ GMV TVEPG Y      D  
Sbjct: 431 SEYKELVSQGYRFCPHHVSHYLGMDVHDTPHVPRNTRIVPGMVFTVEPGIYIGQ---DCG 487

Query: 579 RNNPEQSRFFNWHRVERFIGFGGVRIEDDVLITDDG-VENLTFV----PRTVQEI 728
              PE            F G G +RIEDD+LI ++G VE LT      PR +QE+
Sbjct: 488 DVPPE------------FRGIG-IRIEDDLLINENGHVEVLTEACVKDPRALQEL 529


>BT001331-1|AAN71086.1|  559|Drosophila melanogaster AT18731p
           protein.
          Length = 559

 Score = 38.7 bits (86), Expect = 0.009
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +2

Query: 74  ATPGTPNSKIIVDGD-ISLFDMGGNYAGYAADITCSFPANGKFTEDQKLIYEAVLFAR 244
           A P    +   +DG+ +   D G  Y GY   +   +P++G+FT  QK+IY A+L  R
Sbjct: 325 ARPDVTKTSCGLDGNGLWQMDAGCQYGGYEGGLARCWPSSGRFTPPQKMIYGALLDMR 382


>AE014296-3710|AAN12200.1|  534|Drosophila melanogaster CG32454-PA
           protein.
          Length = 534

 Score = 38.7 bits (86), Expect = 0.009
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +2

Query: 74  ATPGTPNSKIIVDGD-ISLFDMGGNYAGYAADITCSFPANGKFTEDQKLIYEAVLFAR 244
           A P    +   +DG+ +   D G  Y GY   +   +P++G+FT  QK+IY A+L  R
Sbjct: 300 ARPDVTKTSCGLDGNGLWQMDAGCQYGGYEGGLARCWPSSGRFTPPQKMIYGALLDMR 357


>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
           protein.
          Length = 2284

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
 Frame = +3

Query: 255 KRSET--RCVLARNAPDCQPRYARPSKDGRPTARRY*RNDS---ERS*WYPTTSRFRPFV 419
           +RS T  RC      PDCQP    P    +P    Y  +D    + + + P T+R RP +
Sbjct: 435 RRSSTKPRCYPGSTDPDCQPATRAPITTVKPGC--YPGSDDPECQPATYVPQTTR-RPSI 491

Query: 420 RTGRARC 440
            T R RC
Sbjct: 492 TTKRPRC 498


>BT009982-1|AAQ22451.1| 1272|Drosophila melanogaster RE53634p
           protein.
          Length = 1272

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -2

Query: 124 TYVAVYDNLAVRSARRGRSEVSRRCAPICICKCTKHVGT 8
           T+  +Y+       +   +EVS+   P C C C  H+G+
Sbjct: 512 TWDCIYETSGTVITKENSTEVSQEIGPGCRCGCIVHLGS 550


>BT004494-1|AAO42658.1| 1113|Drosophila melanogaster GH24302p
           protein.
          Length = 1113

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 279 LARNAPDCQPRYARPSKDGRPTARRY*RNDSERS 380
           L+ N P  + R   PS+   P  RR  RNDS  S
Sbjct: 785 LSNNPPSSENRRKAPSQTSYPVLRRIQRNDSNNS 818


>AE014296-3314|AAF49041.3| 1272|Drosophila melanogaster CG32227-PA
           protein.
          Length = 1272

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -2

Query: 124 TYVAVYDNLAVRSARRGRSEVSRRCAPICICKCTKHVGT 8
           T+  +Y+       +   +EVS+   P C C C  H+G+
Sbjct: 512 TWDCIYETSGTVITKENSTEVSQEIGPGCRCGCIVHLGS 550


>AE014296-2185|AAN11856.1| 1047|Drosophila melanogaster CG32106-PA
           protein.
          Length = 1047

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 279 LARNAPDCQPRYARPSKDGRPTARRY*RNDSERS 380
           L+ N P  + R   PS+   P  RR  RNDS  S
Sbjct: 667 LSNNPPSSENRRKAPSQTSYPVLRRIQRNDSNNS 700


>AY071585-1|AAL49207.1|  486|Drosophila melanogaster RE64043p
           protein.
          Length = 486

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -1

Query: 521 SS*ECLAVRSLARG-PVILGGQLGRYPPTSCTSSPNK 414
           SS E   V SLA   PV+   + GR+ P SC + P+K
Sbjct: 391 SSPEAKCVESLALSCPVLTPPRNGRFYPASCNNEPSK 427


>AE014296-1315|AAS65064.1|  486|Drosophila melanogaster CG32373-PB,
           isoform B protein.
          Length = 486

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -1

Query: 521 SS*ECLAVRSLARG-PVILGGQLGRYPPTSCTSSPNK 414
           SS E   V SLA   PV+   + GR+ P SC + P+K
Sbjct: 391 SSPEAKCVESLALSCPVLTPPRNGRFYPASCNNEPSK 427


>AE014296-1314|AAN12048.1|  486|Drosophila melanogaster CG32373-PA,
           isoform A protein.
          Length = 486

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -1

Query: 521 SS*ECLAVRSLARG-PVILGGQLGRYPPTSCTSSPNK 414
           SS E   V SLA   PV+   + GR+ P SC + P+K
Sbjct: 391 SSPEAKCVESLALSCPVLTPPRNGRFYPASCNNEPSK 427


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,301,135
Number of Sequences: 53049
Number of extensions: 732321
Number of successful extensions: 1798
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1796
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)