Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0240
         (794 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g29500.1 68417.m04209 prolidase-related contains similarity t...    94   8e-20
At4g29490.1 68417.m04208 Xaa-Pro dipeptidase, putative / prolida...    68   6e-12
At1g09300.1 68414.m01041 metallopeptidase M24 family protein sim...    46   2e-05
At3g50170.1 68416.m05485 hypothetical protein contains Pfam prof...    28   6.2  
At1g79110.2 68414.m09225 expressed protein                             28   6.2  
At1g79110.1 68414.m09224 expressed protein                             28   6.2  
At2g35680.1 68415.m04376 dual specificity protein phosphatase fa...    28   8.2  

>At4g29500.1 68417.m04209 prolidase-related contains similarity to
           prolidase GI:3114966 from [Suberites domuncula]
          Length = 169

 Score = 94.3 bits (224), Expect = 8e-20
 Identities = 45/83 (54%), Positives = 57/83 (68%)
 Frame = +3

Query: 501 SQTLLAGMVLTVEPGCYFIPRLLDSARNNPEQSRFFNWHRVERFIGFGGVRIEDDVLITD 680
           ++ LL GMV+TVEPGCYFI  LL  A  N   S+FFN   +ERF  FGGVRIE D+++T 
Sbjct: 81  ARDLLEGMVITVEPGCYFIKALLFPAMANATTSKFFNRETIERFRNFGGVRIESDLVVTA 140

Query: 681 DGVENLTFVPRTVQEIEEFMSNG 749
           +G +N+T VPR   EIE  M+ G
Sbjct: 141 NGCKNMTNVPRETWEIEAVMAGG 163



 Score = 44.4 bits (100), Expect = 9e-05
 Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = +1

Query: 265 KPGVFWHEMHLTANRAMLAHLKMGGLLQGDIEEMIRNGVNGILQPXXXXXXXXXXXXXXX 444
           KPGV W +MH  A + +L  LK G +L GD+++M+   +  +  P               
Sbjct: 2   KPGVNWVDMHKLAEKIILESLKKGSILTGDVDDMMVQRLGAVFMPHGLGHFMGIDTHDTG 61

Query: 445 XYLPNCPPRMTGP-LAKLRTAR 507
            Y P    R   P L  LRTAR
Sbjct: 62  GY-PKGVERPKKPGLKSLRTAR 82


>At4g29490.1 68417.m04208 Xaa-Pro dipeptidase, putative / prolidase,
           putative / imidodipeptidase, putative similar to
           SP|P12955 Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro
           dipeptidase) (Proline dipeptidase) (Prolidase)
           (Imidodipeptidase) {Homo sapiens}; contains Pfam
           profiles PF00557: metallopeptidase family M24, PF05195:
           Aminopeptidase P, N-terminal domain
          Length = 333

 Score = 68.1 bits (159), Expect = 6e-12
 Identities = 28/45 (62%), Positives = 32/45 (71%)
 Frame = +2

Query: 89  PNSKIIVDGDISLFDMGGNYAGYAADITCSFPANGKFTEDQKLIY 223
           PN +   DGD++L DMG  Y  Y +DITCSFP NGKFT DQ LIY
Sbjct: 260 PNDRTFEDGDLALLDMGAEYHFYGSDITCSFPVNGKFTSDQSLIY 304



 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 20/26 (76%), Positives = 22/26 (84%)
 Frame = +1

Query: 4   GGCRHVSYTCICRSGHNAATLHYGHA 81
           GGCRH SYTCIC +G N+A LHYGHA
Sbjct: 232 GGCRHCSYTCICATGDNSAVLHYGHA 257


>At1g09300.1 68414.m01041 metallopeptidase M24 family protein
           similar to SP|P15034 Xaa-Pro aminopeptidase (EC
           3.4.11.9) (X-Pro aminopeptidase) (Aminopeptidase P II)
           (Aminoacylproline aminopeptidase) {Escherichia coli};
           contains Pfam profiles PF00557: metallopeptidase family
           M24, PF05195: Aminopeptidase P, N-terminal domain
          Length = 493

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
 Frame = +3

Query: 483 SGQTTHSQTLLAGMVLTVEPGCYFIPRLLDSARNNPEQSRFFNWHRVERFIGFGGVRIED 662
           S    + + L  G V+T+EPG Y IP   D                 ERF G  G+RIED
Sbjct: 392 SSAVGYDRPLQPGFVITIEPGVY-IPSSFDCP---------------ERFQGI-GIRIED 434

Query: 663 DVLITDDGVENLT-FVPRTVQEIEEFMSNGSNFN 761
           DVLIT+ G E LT  +P+ ++ IE  ++N  + N
Sbjct: 435 DVLITETGYEVLTGSMPKEIKHIETLLNNHCHDN 468



 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 20/48 (41%), Positives = 31/48 (64%)
 Frame = +2

Query: 92  NSKIIVDGDISLFDMGGNYAGYAADITCSFPANGKFTEDQKLIYEAVL 235
           N + I DGD+ L DMG    GY +D+T ++P  GKF+  Q+ +Y+ +L
Sbjct: 283 NDQRIKDGDLVLMDMGCELHGYVSDLTRTWPPCGKFSSVQEELYDLIL 330


>At3g50170.1 68416.m05485 hypothetical protein contains Pfam profile
           PF03140: Plant protein of unknown function
          Length = 541

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +2

Query: 524 GTDCRAGLLFYTKIIGFGPKQPGAVSFLQLAQSRTFHWLRRSTD 655
           GT  + G++ +  +  F P  P   +  +  QS+  +WL +S D
Sbjct: 266 GTQNQTGIVAHVAVKFFDPLMPTGEALTKPDQSKLMNWLEKSLD 309


>At1g79110.2 68414.m09225 expressed protein
          Length = 355

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +2

Query: 50  TTPRHFTTATPGTPNSKIIVDGDISLFDMGGNYAGYAADITCSF 181
           + P H +T T  TP    +  G  ++    G YA  A ++ C F
Sbjct: 50  SVPNHTSTTTTATPPLLHVYGGSDTIPTTAGYYADGATNLDCEF 93


>At1g79110.1 68414.m09224 expressed protein
          Length = 358

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +2

Query: 50  TTPRHFTTATPGTPNSKIIVDGDISLFDMGGNYAGYAADITCSF 181
           + P H +T T  TP    +  G  ++    G YA  A ++ C F
Sbjct: 50  SVPNHTSTTTTATPPLLHVYGGSDTIPTTAGYYADGATNLDCEF 93


>At2g35680.1 68415.m04376 dual specificity protein phosphatase
           family protein contains Pfam profile: PF00782 dual
           specificity phosphatase, catalytic domain
          Length = 337

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +3

Query: 552 FIPRLLDSARNNPEQSRFFNWHRVERFIGFGGVRIEDDV 668
           F P L+ +   N  +S F  W RV  FI  G V    DV
Sbjct: 54  FYPTLVYNVVRNKLESEFRWWDRVAEFILLGAVPFPSDV 92


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,876,567
Number of Sequences: 28952
Number of extensions: 343674
Number of successful extensions: 869
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1794809600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)