Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0237
         (713 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    26   0.31 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.71 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.71 
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    23   2.9  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   3.8  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   5.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   5.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.0  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   6.6  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.6  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 351 ASHNASSLPTSLTSAPRCSARGLQQTSISHR 443
           AS +ASS PTS+ S+PR   + ++   +  R
Sbjct: 593 ASSSASSAPTSVCSSPRSEDKEVEDMPVLKR 623


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -2

Query: 604  GFGPGL-ETLDVGESTNFVHSLFGCASAFGAKPRMALLRPATRFGIV 467
            GF  G  ET     S NF  S+ G     GA+ R+  LRP T++ +V
Sbjct: 1041 GFNVGYRETSSSNPSYNF-SSVSGDGEEGGAELRLTGLRPYTKYTLV 1086


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -2

Query: 604  GFGPGL-ETLDVGESTNFVHSLFGCASAFGAKPRMALLRPATRFGIV 467
            GF  G  ET     S NF  S+ G     GA+ R+  LRP T++ +V
Sbjct: 1037 GFNVGYRETSSSNPSYNF-SSVSGDGEEGGAELRLTGLRPYTKYTLV 1082


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 100 TRHNSHNCDPNEDFCPDKLQGYFSRNQDFPYPI*EKFGNYP 222
           T HN++N   N +    KL    +  +  P P+   +GN+P
Sbjct: 89  TIHNNNNYKYNYNNNCKKLYYNINYIEQIPIPVPVYYGNFP 129


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
            receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = +2

Query: 359  QRVVTTDLVDLGAEMFGSGTSADFNFAPKSDSGADPYDAKTSRRPEERHPRLR 517
            +R+ +  L D         T A  N  P+S   A P D+   +RP  R   +R
Sbjct: 886  RRIQSNGLNDPTTVSLAVDTVARSNVTPRSPGRAWPGDSDIRQRPIPRSDDIR 938


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 15/58 (25%), Positives = 22/58 (37%)
 Frame = -1

Query: 674 PAARPDEKFSDLVRRRALKVKVHWFRTGTRNAGCRRVDEXXXXXXXXXXXFWSEAADG 501
           P+A  D  F D+++R + K         TR    R + E            W  A+DG
Sbjct: 176 PSAADDRMFDDIIQRLSKKANARAVVLFTRAEDARGILEAARRSNLSQPFQWL-ASDG 232


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 15/58 (25%), Positives = 22/58 (37%)
 Frame = -1

Query: 674 PAARPDEKFSDLVRRRALKVKVHWFRTGTRNAGCRRVDEXXXXXXXXXXXFWSEAADG 501
           P+A  D  F D+++R + K         TR    R + E            W  A+DG
Sbjct: 266 PSAADDRMFDDIIQRLSKKANARAVVLFTRAEDARGILEAARRSNLSQPFQWL-ASDG 322


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +1

Query: 271 ASHCIAAEQYSGTGDATPTA--RTKGRFALLTT 363
           A+  + A   +GTG ATP+A   T    A +TT
Sbjct: 224 ATTTLPAASATGTGPATPSAVVATSNATAAMTT 256


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = +3

Query: 60  NDIWSISEAQAHHYASQFSQLRPERGLL 143
           N  W++     H Y  +F ++  + G+L
Sbjct: 44  NVYWNVPTFMCHKYGLRFEEVSEKYGIL 71


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 14/54 (25%), Positives = 24/54 (44%)
 Frame = -3

Query: 690 EASGVTRSATG*KIFGSRSTARAESQSSLVSDRDSKRWM*ESRRTSSTLCSAAR 529
           EA     S +       RST R+ ++ SL+ D  ++  +     TSS   + +R
Sbjct: 246 EADDAEESVSSETNHNERSTPRSHAKPSLIDDEPTEVTIGGGGTTSSRRTTGSR 299


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 14/54 (25%), Positives = 24/54 (44%)
 Frame = -3

Query: 690 EASGVTRSATG*KIFGSRSTARAESQSSLVSDRDSKRWM*ESRRTSSTLCSAAR 529
           EA     S +       RST R+ ++ SL+ D  ++  +     TSS   + +R
Sbjct: 246 EADDAEESVSSETNHNERSTPRSHAKPSLIDDEPTEVTIGGGGTTSSRRTTGSR 299


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 14/54 (25%), Positives = 24/54 (44%)
 Frame = -3

Query: 690 EASGVTRSATG*KIFGSRSTARAESQSSLVSDRDSKRWM*ESRRTSSTLCSAAR 529
           EA     S +       RST R+ ++ SL+ D  ++  +     TSS   + +R
Sbjct: 246 EADDAEESVSSETNHNERSTPRSHAKPSLIDDEPTEVTIGGGGTTSSRRTTGSR 299


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,580
Number of Sequences: 438
Number of extensions: 3864
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)