Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0236
         (717 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            27   0.58 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   4.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   7.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.5  

>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -2

Query: 512 WKALSRRGGERSPRHRPPYGGALADRMRSVEPAGSGRGGPDAA 384
           WKA       R P  +  +  AL    RS+   GSG GGP ++
Sbjct: 705 WKAQFTDDVVRHPNIKECFRKALELMQRSIGLGGSGAGGPSSS 747


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
 Frame = -3

Query: 211 LRSPPGEEGDP*WNRDPSDPPDRACCGHHTDRRIPGNQVHRQERRAAVE-GPAFPRGRSG 35
           LR P GE G      DP  P      G   D   PG   +  +     E GP  P G  G
Sbjct: 114 LRGPKGERGGMGDRGDPGLPGSLGYPGEKGDLGTPGPPGYPGDVGPKGEPGPKGPAGHPG 173

Query: 34  QSAR 23
              R
Sbjct: 174 APGR 177


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 491 GGERSPRHRPPYGGAL 444
           G   S +H+PPYGG +
Sbjct: 40  GALGSQQHQPPYGGGV 55


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 29/130 (22%), Positives = 42/130 (32%)
 Frame = -3

Query: 412  AAAEAARTPL*DDVRYEENVWSTQSSRTPISLSMSETSGVHENSKWDPDEDEASRTSRCP 233
            AAA AA +PL    +   +  S  SS +P+         +H ++   P           P
Sbjct: 783  AAAMAAASPLSLSSKAPPHPHSALSSHSPVGAGSHHLHHLHHHAAQQPPPGSHPGAQTQP 842

Query: 232  SSAHLSRLRSPPGEEGDP*WNRDPSDPPDRACCGHHTDRRIPGNQVHRQERRAAVEGPAF 53
              +     + PPG  G    +     PP      HH    +  +  H Q   A V   A 
Sbjct: 843  QLS-----QHPPGASGR---SSAVITPPST----HHQAAAVAAHHHHLQHHAAMVAAAAA 890

Query: 52   PRGRSGQSAR 23
                  Q  R
Sbjct: 891  AAASQEQQQR 900


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,117
Number of Sequences: 2352
Number of extensions: 13689
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)