Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0236
         (717 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094828-1|AAM11181.1| 1765|Drosophila melanogaster LD40380p pro...    29   6.3  
AE014297-3524|AAF56278.2| 2232|Drosophila melanogaster CG31132-P...    29   6.3  

>AY094828-1|AAM11181.1| 1765|Drosophila melanogaster LD40380p
           protein.
          Length = 1765

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -2

Query: 527 VDTSFWKALSRRGGERSPRH-RPPYGGALADRMRSVEPAGSGRGGPDAALR*RQIRGERV 351
           ++T+   +  + G    PR+ R   GGA A R R  +PAG   G P  A R R +R +  
Sbjct: 347 INTASAASSQQPGSVGRPRNTRGNGGGARAGRRRGPQPAG---GQPQPAYRTRAVRDQEP 403

Query: 350 VH 345
            H
Sbjct: 404 EH 405


>AE014297-3524|AAF56278.2| 2232|Drosophila melanogaster CG31132-PA
           protein.
          Length = 2232

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -2

Query: 527 VDTSFWKALSRRGGERSPRH-RPPYGGALADRMRSVEPAGSGRGGPDAALR*RQIRGERV 351
           ++T+   +  + G    PR+ R   GGA A R R  +PAG   G P  A R R +R +  
Sbjct: 814 INTASAASSQQPGSVGRPRNTRGNGGGARAGRRRGPQPAG---GQPQPAYRTRAVRDQEP 870

Query: 350 VH 345
            H
Sbjct: 871 EH 872


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,918,485
Number of Sequences: 53049
Number of extensions: 629006
Number of successful extensions: 2057
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2047
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)