Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0236
(717 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g43320.1 68416.m04579 hypothetical protein 31 0.76
At1g29170.1 68414.m03569 expressed protein ; expression supporte... 29 3.1
At1g20670.1 68414.m02589 DNA-binding bromodomain-containing prot... 29 3.1
At2g31720.1 68415.m03871 expressed protein contains Pfam profile... 29 4.1
At2g26890.1 68415.m03226 DNAJ heat shock N-terminal domain-conta... 29 4.1
At4g30710.2 68417.m04353 expressed protein contains Pfam domain,... 28 5.4
At4g30710.1 68417.m04352 expressed protein contains Pfam domain,... 28 5.4
At2g12875.1 68415.m01402 hypothetical protein 28 5.4
At5g67580.2 68418.m08522 myb family transcription factor contain... 28 7.1
At5g67580.1 68418.m08521 myb family transcription factor contain... 28 7.1
At5g05260.1 68418.m00564 cytochrome P450 79A2 (CYP79A2) identica... 28 7.1
At4g10890.1 68417.m01772 expressed protein 28 7.1
At2g13550.1 68415.m01494 expressed protein 28 7.1
At5g03110.1 68418.m00259 expressed protein various predicted pro... 27 9.4
At3g06630.1 68416.m00770 protein kinase family protein contains ... 27 9.4
At3g03810.1 68416.m00391 expressed protein contains Pfam PF03138... 27 9.4
At2g39320.1 68415.m04827 OTU-like cysteine protease family prote... 27 9.4
>At3g43320.1 68416.m04579 hypothetical protein
Length = 510
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = -3
Query: 379 DDVRYEENVWSTQSSRTPISLSMSETSGVHENSKWDPDEDEASRTSRCPSSAHLSRLRSP 200
+D+R +E V +T S + SM V E D +RCP S+H +R + P
Sbjct: 418 EDIREDEIVVTTTSEINVVGQSMVTEKAV-ETDFQTSDISGVGGRNRCPKSSHPTRKQQP 476
Query: 199 PGEE 188
G +
Sbjct: 477 RGSK 480
>At1g29170.1 68414.m03569 expressed protein ; expression supported
by MPSS
Length = 1016
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 319 LSMSETSGVHENSKWDPDEDEASRTSRCPS 230
LS ET H+N ++ P + +A+R S C S
Sbjct: 290 LSECETEDAHDNFQFSPSQGQAARGSSCVS 319
>At1g20670.1 68414.m02589 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 652
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = -3
Query: 292 HENSKWDPDEDEASRTSRC----PSSA-HLSRLRSPPGEEGDP*WNRDPSDPPD 146
H+N+ D D+ + +R P+S H S+ R+P +GD W +D + D
Sbjct: 41 HKNNHQDDDDHHHNNNNRSGSKNPNSLNHRSKRRNPNSNDGDSPWIKDEGEDND 94
>At2g31720.1 68415.m03871 expressed protein contains Pfam profile
PF03754: Domain of unknown function (DUF313)
Length = 313
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -3
Query: 340 SSRTPISLSMSETSGVHENSKWDPDEDEASRTSRCPSSAHLSRLRSPPGEEGDP*WNRDP 161
S T ++ S+S+ + E DP+++ +R + PSS HL R P NR P
Sbjct: 61 SLSTTMNSSLSKRLKIDECKNQDPEQNP-NRVASSPSSCHLESKRPQKVVSNKPVRNRKP 119
>At2g26890.1 68415.m03226 DNAJ heat shock N-terminal domain-containing
protein contains Pfam profile PF00226: DnaJ domain
Length = 2554
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +1
Query: 217 LDALTTDIDSFETLRPRLDPTLSSRARLTSRTCSARSAYG 336
LDA+T D D L P L + + L S TC+A S G
Sbjct: 1621 LDAVTVDKDDNNFLSNDRSPLLVAASELVSLTCAASSLNG 1660
>At4g30710.2 68417.m04353 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 28.3 bits (60), Expect = 5.4
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = +1
Query: 265 RLDPTLSSRARLTSRTCSARSAYGTTGWTTRSPRI*RHLRAASGPPRPLPAGSTDLMRSA 444
R+ LSS +R +T S S+YG T+S ++ SG R L AGS D A
Sbjct: 249 RMSLPLSSSSRPLHKTSSNTSSYGGLVSPTKSED--NNIARTSGAQRLLSAGSLDRATLA 306
Query: 445 NA 450
A
Sbjct: 307 TA 308
>At4g30710.1 68417.m04352 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 28.3 bits (60), Expect = 5.4
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = +1
Query: 265 RLDPTLSSRARLTSRTCSARSAYGTTGWTTRSPRI*RHLRAASGPPRPLPAGSTDLMRSA 444
R+ LSS +R +T S S+YG T+S ++ SG R L AGS D A
Sbjct: 249 RMSLPLSSSSRPLHKTSSNTSSYGGLVSPTKSED--NNIARTSGAQRLLSAGSLDRATLA 306
Query: 445 NA 450
A
Sbjct: 307 TA 308
>At2g12875.1 68415.m01402 hypothetical protein
Length = 325
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 1/80 (1%)
Frame = -3
Query: 331 TPISLSMSETSGV-HENSKWDPDEDEASRTSRCPSSAHLSRLRSPPGEEGDP*WNRDPSD 155
TP+ ++ E +E K + DE+E S + EEG+ W R
Sbjct: 189 TPVLEAVEEEKSYKNEEEKSEKDEEEKSEEEESEEEEKEEEEKEEEKEEGNDCWGRISPK 248
Query: 154 PPDRACCGHHTDRRIPGNQV 95
P RA R PG+Q+
Sbjct: 249 RPSRA----RETRYAPGSQL 264
>At5g67580.2 68418.m08522 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 299
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = -3
Query: 352 WSTQSSRTPISLSMSETSGVHENSKWDPDEDEASRTSRCPSSAHLSRLRSPPGEEGD 182
W T S T SL + S V KW A SR A L+ R+PPG + D
Sbjct: 28 WRTILSDTEFSLILKSRSNVDLKDKWRNISVTALWGSR--KKAKLALKRTPPGTKQD 82
>At5g67580.1 68418.m08521 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 299
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = -3
Query: 352 WSTQSSRTPISLSMSETSGVHENSKWDPDEDEASRTSRCPSSAHLSRLRSPPGEEGD 182
W T S T SL + S V KW A SR A L+ R+PPG + D
Sbjct: 28 WRTILSDTEFSLILKSRSNVDLKDKWRNISVTALWGSR--KKAKLALKRTPPGTKQD 82
>At5g05260.1 68418.m00564 cytochrome P450 79A2 (CYP79A2) identical
to SP|Q9FLC8 Cytochrome P450 79A2 (EC 1.-.-.-)
{Arabidopsis thaliana}
Length = 523
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = -3
Query: 691 QKHLEHSLEH*TPERRRLIQ-LNIENKKNATGAVVCFQNNFHPRSLLNNFVH*IQMSTRH 515
+K + L+ T E L++ +N + KN A V R N + RH
Sbjct: 144 KKSFQMMLQKRTEEADNLVRYINNRSVKNRGNAFVVIDLRLAVRQYSGNVARKMMFGIRH 203
Query: 514 FGRHSLGGAASG 479
FG+ S G+ G
Sbjct: 204 FGKGSEDGSGPG 215
>At4g10890.1 68417.m01772 expressed protein
Length = 527
Score = 27.9 bits (59), Expect = 7.1
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +3
Query: 663 CSRLCSRCFCYSL 701
CSR+CSRC+ YS+
Sbjct: 199 CSRVCSRCYHYSM 211
>At2g13550.1 68415.m01494 expressed protein
Length = 181
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -2
Query: 530 NVDTSFWKALSRRGGERSPRHRPPYGGAL--ADRMRSVEPAGSGRGGPDAALR 378
N++T+ R G R+P+H PY R +S + R P++ LR
Sbjct: 129 NIETNLRNRYRREIGPRTPQHHQPYNHITIKTRRKKSTDEIKQRRTRPESVLR 181
>At5g03110.1 68418.m00259 expressed protein various predicted
proteins, Arabidopsis thaliana
Length = 283
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = -3
Query: 370 RYEENVWSTQSSRTPISLSMSETSGVHENSKWDPDEDEASRTSRCPSSAHLSRLRSPPGE 191
R E+ + +S +T + + + +G HE D DE+E ++ R L+R +S P
Sbjct: 210 REVESQQNVRSEKTDSEVPIEKINGFHEPEYVDRDEEEFTKL-RFVRQPVLTRSKSEPAR 268
Query: 190 EGD 182
G+
Sbjct: 269 IGE 271
>At3g06630.1 68416.m00770 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain,
PF00989 PAS domain, and PF00785 PAC motif
Length = 671
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -3
Query: 148 DRACCG--HHTDRRIPGNQVHRQERRAAVEGPAFPRGRSGQS 29
D + CG HH+D + G+ + AA G + PRG QS
Sbjct: 244 DNSACGDSHHSDHDVFGDTLSDHRDDAASSGASTPRGDFIQS 285
>At3g03810.1 68416.m00391 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as
'auxin-independent growth promoter protein -related'
based on similarity to axi 1 protein (GB:X80301)
(GI:559920) from [Nicotiana tabacum], which, due to
scienitific fraud was retracted. Retraction in: Schell
J. EMBO J 1999 May 17;18(10):2908. PMID:10400497.
Length = 656
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = -3
Query: 427 QWNRPAAAEAARTPL*DDVRYEENVWSTQSSRTPISLSMSETSGVHENSKWDPDE 263
+W + A E ++T D Y+ ++ + QS S ++ +WDP++
Sbjct: 602 KWIKSAGVEKSKTDDGDQPDYDHDLLAEQSETEEEFAKSKVASAFDQDEEWDPND 656
>At2g39320.1 68415.m04827 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 189
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = -3
Query: 319 LSMSETSGVHENSKWDPDEDEASRTSRCPSSAHLSRLR 206
+ MS +G+H NS + ++++ SR+S SSA +L+
Sbjct: 87 IHMSYLAGIHFNSIYKKNKEKGSRSSSSSSSAVWMKLQ 124
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,497,744
Number of Sequences: 28952
Number of extensions: 275153
Number of successful extensions: 791
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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