Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0235
         (773 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    38   7e-05
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    38   1e-04
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    33   0.003
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    33   0.003
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    32   0.006
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    32   0.006
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    31   0.010
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    31   0.010
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    31   0.010
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    31   0.014
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    29   0.055
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   2.7  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.3  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 38.3 bits (85), Expect = 7e-05
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +3

Query: 9   VTYDDARSVIEKGKYVRNNKLGGLFAWEIDADN 107
           V+YDD +S+  K KY ++N L G+  W ID D+
Sbjct: 314 VSYDDEQSIGLKAKYAKDNGLAGVAVWSIDTDD 346


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 37.5 bits (83), Expect = 1e-04
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +3

Query: 9   VTYDDARSVIEKGKYVRNNKLGGLFAWEIDADN 107
           V YDD+ SV +K  YV+   LGG+F W  D D+
Sbjct: 487 VGYDDSESVEKKVNYVQEMNLGGVFIWATDLDD 519



 Score = 35.1 bits (77), Expect = 6e-04
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 9    VTYDDARSVIEKGKYVRNNKLGGLFAWEIDADN 107
            V ++D +SV +K +Y++    GG  AW ID D+
Sbjct: 939  VGFEDIKSVRDKAEYIKTKGFGGAVAWTIDLDD 971



 Score = 32.3 bits (70), Expect = 0.004
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 9    VTYDDARSVIEKGKYVRNNKLGGLFAWEIDADN 107
            V+YDD   +  K + V+  KLGG   W +D D+
Sbjct: 2635 VSYDDIAEIRRKSRLVKALKLGGGMVWALDLDD 2667



 Score = 31.1 bits (67), Expect = 0.010
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 9    VTYDDARSVIEKGKYVRNNKLGGLFAWEIDADN 107
            V++DD   +  K +++R   LGG   W +D D+
Sbjct: 1712 VSFDDREMIKRKSEFIRKMDLGGGMIWALDLDD 1744



 Score = 27.9 bits (59), Expect = 0.095
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +3

Query: 9    VTYDDARSVIEKGKYVRNNKLGGLFAWEIDADN 107
            V++DD   +  K ++++   LGG   W +D D+
Sbjct: 2137 VSFDDIGMIRHKSEFIKAMGLGGGMIWALDLDD 2169


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 33.1 bits (72), Expect = 0.003
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 9   VTYDDARSVIEKGKYVRNNKLGGLFAWEIDADN 107
           + YD+ +SV  K +Y +   L G+F W I+ D+
Sbjct: 324 IGYDNEQSVTIKTEYAKEKNLAGVFIWSIETDD 356


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 32.7 bits (71), Expect = 0.003
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 9   VTYDDARSVIEKGKYVRNNKLGGLFAWEIDADN 107
           + +DD +S+  K K++++N   G   W ID D+
Sbjct: 401 IGFDDEKSIRNKMKWIKDNGFAGAMVWTIDMDD 433



 Score = 30.3 bits (65), Expect = 0.018
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 9   VTYDDARSVIEKGKYVRNNKLGGLFAWEIDADN 107
           V +DD RS+  K  +++    GG+  W +D D+
Sbjct: 831 VGFDDERSLKTKMAWLKEEGFGGIMIWSVDMDD 863


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 31.9 bits (69), Expect = 0.006
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 8/52 (15%)
 Frame = +3

Query: 9   VTYDDARSVIEKGKYVRNNKLGGLFAWEIDAD--NG------DILNAMNMGL 140
           V YD+ +S+  K +Y ++  L G+  W I+ D  NG       ILNA+N  L
Sbjct: 335 VGYDNPKSIAIKVQYAKSLNLAGVMIWSIETDDFNGLSGTKYQILNAINAAL 386


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 31.9 bits (69), Expect = 0.006
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 9   VTYDDARSVIEKGKYVRNNKLGGLFAWEIDADN 107
           + YDD  SV  K ++ +++ + GL  W +D D+
Sbjct: 326 IGYDDEESVALKVQFAKDHNMAGLMIWTVDMDD 358


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 31.1 bits (67), Expect = 0.010
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 15  YDDARSVIEKGKYVRNNKLGGLFAWEIDADN 107
           +DD +S+  K ++     LGG+  W +D D+
Sbjct: 332 FDDPKSIQVKVEFANEKNLGGVMVWSLDTDD 362


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 31.1 bits (67), Expect = 0.010
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +3

Query: 15  YDDARSVIEKGKYVRNNKLGGLFAWEIDADN 107
           +DD +S+  K ++  +  LGG+  W +D D+
Sbjct: 333 FDDPKSIQLKVEFANSKNLGGVMVWSLDTDD 363


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 31.1 bits (67), Expect = 0.010
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +3

Query: 15  YDDARSVIEKGKYVRNNKLGGLFAWEIDADN 107
           +DD +S+  K ++  +  LGG+  W +D D+
Sbjct: 333 FDDPKSIQLKVEFANSKNLGGVMVWSLDTDD 363


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 30.7 bits (66), Expect = 0.014
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +3

Query: 9   VTYDDARSVIEKGKYVRNNKLGGLFAWEIDADN 107
           V +D  +++  K +Y ++  LGG+  W I+ D+
Sbjct: 331 VAFDSPKAISNKVEYAKSLNLGGVMIWSIETDD 363


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 28.7 bits (61), Expect = 0.055
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 9   VTYDDARSVIEKGKYVRNNKLGGLFAWEIDADN 107
           V Y+D  SV  K  ++++   GG   W ID D+
Sbjct: 343 VGYEDPESVQIKMDWIKSKGYGGAMTWAIDMDD 375


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 9   VTYDDARSVIEKGKYVRNNKLGGLFAWEIDADN 107
           V Y+D  +   K  Y R   LGG+   +I  D+
Sbjct: 379 VGYEDPDTAGNKASYARAKGLGGIAIVDITLDD 411


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 9   VTYDDARSVIEKGKYVRNNKLGGLFAWEIDADN 107
           V Y+D  +   K  YV+   LGG+   ++  D+
Sbjct: 387 VGYEDTDTAGYKASYVKAKGLGGIAIVDLSLDD 419


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 478 LPATLHPHHHSP 513
           LP   HPHH  P
Sbjct: 735 LPPPPHPHHQPP 746


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 478 LPATLHPHHHSP 513
           LP   HPHH  P
Sbjct: 627 LPPPPHPHHQPP 638


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,440
Number of Sequences: 336
Number of extensions: 3259
Number of successful extensions: 24
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)