Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0235
         (773 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si...    38   0.010
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si...    36   0.023
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si...    35   0.069
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si...    33   0.16 
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si...    33   0.21 
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si...    30   1.5  
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si...    29   2.6  
At4g00440.1 68417.m00061 expressed protein                             28   7.9  

>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 363

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +3

Query: 6   LVTYDDARSVIEKGKYVRNNKLGGLFAWEIDADN 107
           L+ YDD +SV+ K KY +   L G F+W + AD+
Sbjct: 305 LIGYDDHQSVVAKVKYAKQKGLLGYFSWHVGADD 338


>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
           similar to chitinase/lysozyme GI:467689 from [Nicotiana
           tabacum]
          Length = 366

 Score = 36.3 bits (80), Expect = 0.023
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 9   VTYDDARSVIEKGKYVRNNKLGGLFAWEIDADNGDILN 122
           + YDD +S++ K KY +   L G F+W I AD+   L+
Sbjct: 320 IGYDDNQSIVMKVKYAKQRGLLGYFSWHIGADDNSRLS 357


>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
           similar to chitinase/lysozyme GI:467689 from [Nicotiana
           tabacum]
          Length = 379

 Score = 34.7 bits (76), Expect = 0.069
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +3

Query: 9   VTYDDARSVIEKGKYVRNNKLGGLFAWEIDADNGDILN 122
           + YDD +S++ K +Y +   L G F+W + AD+   L+
Sbjct: 322 IGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGLS 359


>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:505267 from [Nicotiana
           tabacum]
          Length = 365

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 9   VTYDDARSVIEKGKYVRNNKLGGLFAWEIDAD 104
           + YDD +S++ K KY +   L G F+W + AD
Sbjct: 321 IGYDDNQSIVYKVKYAKFTGLLGYFSWHVGAD 352


>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 362

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 9   VTYDDARSVIEKGKYVRNNKLGGLFAWEIDAD 104
           + YDD +S++ K +Y +   L G F+W + AD
Sbjct: 311 IGYDDNQSIVSKVRYAKLKGLLGYFSWHVGAD 342


>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 398

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +3

Query: 9   VTYDDARSVIEKGKYVRNNKLGGLFAWEIDADNGDILNA 125
           + YD  +S++ K  Y +   L G F+W +  D+   L++
Sbjct: 300 IGYDSEKSIVTKVIYAKQKGLLGYFSWHVGGDDNSELSS 338


>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 261

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +3

Query: 9   VTYDDARSVIEKGKYVRNNKLGGLFAWEIDADNGDILNA 125
           + YD   S++ K  Y +   L G F+W++  D+   L++
Sbjct: 213 IGYDSEESIVTKVIYAKQKGLLGYFSWQVGGDDKSELSS 251


>At4g00440.1 68417.m00061 expressed protein 
          Length = 831

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
 Frame = -3

Query: 474 LDERSRKSCSVANNWRGLCLSVDCYRLXXXXXXXXXXXMTIVI--TMLSLIPPHTKQRNT 301
           LD+  RK  + A NW  +   +DC                +++  T  SL+ P  K   +
Sbjct: 765 LDQIVRKDMARAGNWLDIRCDIDCIGFETSELILNELLEELILNNTEHSLVSPELKTDGS 824

Query: 300 ILII 289
           ILI+
Sbjct: 825 ILIL 828


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,910,737
Number of Sequences: 28952
Number of extensions: 280821
Number of successful extensions: 662
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1726528800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)