Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0234
(766 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83122-7|CAF31483.1| 618|Caenorhabditis elegans Hypothetical pr... 141 4e-34
Z83122-6|CAF31482.1| 587|Caenorhabditis elegans Hypothetical pr... 141 4e-34
Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical pr... 141 4e-34
AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical ... 123 2e-28
AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical ... 123 2e-28
AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical ... 123 2e-28
AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical ... 123 2e-28
Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical pr... 108 4e-24
AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical... 44 2e-04
DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related ... 30 2.1
AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeti... 30 2.1
Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical p... 29 4.8
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z69636-2|CAA93463.3| 247|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 28 6.3
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 28 6.3
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 28 6.3
U58746-10|AAY86270.1| 77|Caenorhabditis elegans Hypothetical p... 28 8.4
>Z83122-7|CAF31483.1| 618|Caenorhabditis elegans Hypothetical
protein R11A5.4d protein.
Length = 618
Score = 141 bits (342), Expect = 4e-34
Identities = 60/89 (67%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Frame = +3
Query: 255 EHSGXMVMHDPFAMRPFFGYNFGDYLKHWLSMPQPGRKMPKIFHVNWFRKDEQGKFLWPG 434
E +G VMHDP AMRPF GYNFG YL+HWL + RKMPKI+HVNWFRKD KFLWPG
Sbjct: 465 EFTGKTVMHDPMAMRPFMGYNFGKYLQHWLDLKTDSRKMPKIYHVNWFRKDSNNKFLWPG 524
Query: 435 FGENSRVLDWILRRCDGE-PCHAETPWGT 518
FG+N RV+DWI+RR DGE ETP GT
Sbjct: 525 FGDNIRVIDWIIRRLDGEQEIGVETPIGT 553
Score = 108 bits (260), Expect = 4e-24
Identities = 44/78 (56%), Positives = 56/78 (71%)
Frame = +1
Query: 7 WKGQPWDPSKKTPAAHPNSRFCTPAEQCPMIDGEWESSEGVPISAILQGGRRPAGVPLVV 186
W G+ W + AAHPNSRF PA QCP+I +WES +GVPI AI+ GGRRP GVPL+
Sbjct: 382 WLGEKWHIGEPGVAAHPNSRFAAPANQCPIIHPDWESPQGVPIEAIIFGGRRPQGVPLIY 441
Query: 187 ESRDWQHGVFMGASMRSE 240
E+ W+HGVF G+ ++SE
Sbjct: 442 ETNSWEHGVFTGSCLKSE 459
Score = 58.0 bits (134), Expect = 7e-09
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +2
Query: 509 LGYIPRAGALNTENLSAVDMNKLFSIPKDFWLHEADAIDKYFKEEVGEDLPNEMWDELNK 688
+G +P G++N E L V+ ++L S+P D+W +A I K+ E+VGEDLP + E++
Sbjct: 551 IGTVPAKGSINLEGLGEVNWDELMSVPADYWKQDAQEIRKFLDEQVGEDLPEPVRAEMDA 610
Query: 689 FRK 697
K
Sbjct: 611 QEK 613
>Z83122-6|CAF31482.1| 587|Caenorhabditis elegans Hypothetical
protein R11A5.4c protein.
Length = 587
Score = 141 bits (342), Expect = 4e-34
Identities = 60/89 (67%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Frame = +3
Query: 255 EHSGXMVMHDPFAMRPFFGYNFGDYLKHWLSMPQPGRKMPKIFHVNWFRKDEQGKFLWPG 434
E +G VMHDP AMRPF GYNFG YL+HWL + RKMPKI+HVNWFRKD KFLWPG
Sbjct: 434 EFTGKTVMHDPMAMRPFMGYNFGKYLQHWLDLKTDSRKMPKIYHVNWFRKDSNNKFLWPG 493
Query: 435 FGENSRVLDWILRRCDGE-PCHAETPWGT 518
FG+N RV+DWI+RR DGE ETP GT
Sbjct: 494 FGDNIRVIDWIIRRLDGEQEIGVETPIGT 522
Score = 108 bits (260), Expect = 4e-24
Identities = 44/78 (56%), Positives = 56/78 (71%)
Frame = +1
Query: 7 WKGQPWDPSKKTPAAHPNSRFCTPAEQCPMIDGEWESSEGVPISAILQGGRRPAGVPLVV 186
W G+ W + AAHPNSRF PA QCP+I +WES +GVPI AI+ GGRRP GVPL+
Sbjct: 351 WLGEKWHIGEPGVAAHPNSRFAAPANQCPIIHPDWESPQGVPIEAIIFGGRRPQGVPLIY 410
Query: 187 ESRDWQHGVFMGASMRSE 240
E+ W+HGVF G+ ++SE
Sbjct: 411 ETNSWEHGVFTGSCLKSE 428
Score = 58.0 bits (134), Expect = 7e-09
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +2
Query: 509 LGYIPRAGALNTENLSAVDMNKLFSIPKDFWLHEADAIDKYFKEEVGEDLPNEMWDELNK 688
+G +P G++N E L V+ ++L S+P D+W +A I K+ E+VGEDLP + E++
Sbjct: 520 IGTVPAKGSINLEGLGEVNWDELMSVPADYWKQDAQEIRKFLDEQVGEDLPEPVRAEMDA 579
Query: 689 FRK 697
K
Sbjct: 580 QEK 582
>Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical
protein R11A5.4a protein.
Length = 654
Score = 141 bits (342), Expect = 4e-34
Identities = 60/89 (67%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Frame = +3
Query: 255 EHSGXMVMHDPFAMRPFFGYNFGDYLKHWLSMPQPGRKMPKIFHVNWFRKDEQGKFLWPG 434
E +G VMHDP AMRPF GYNFG YL+HWL + RKMPKI+HVNWFRKD KFLWPG
Sbjct: 501 EFTGKTVMHDPMAMRPFMGYNFGKYLQHWLDLKTDSRKMPKIYHVNWFRKDSNNKFLWPG 560
Query: 435 FGENSRVLDWILRRCDGE-PCHAETPWGT 518
FG+N RV+DWI+RR DGE ETP GT
Sbjct: 561 FGDNIRVIDWIIRRLDGEQEIGVETPIGT 589
Score = 108 bits (260), Expect = 4e-24
Identities = 44/78 (56%), Positives = 56/78 (71%)
Frame = +1
Query: 7 WKGQPWDPSKKTPAAHPNSRFCTPAEQCPMIDGEWESSEGVPISAILQGGRRPAGVPLVV 186
W G+ W + AAHPNSRF PA QCP+I +WES +GVPI AI+ GGRRP GVPL+
Sbjct: 418 WLGEKWHIGEPGVAAHPNSRFAAPANQCPIIHPDWESPQGVPIEAIIFGGRRPQGVPLIY 477
Query: 187 ESRDWQHGVFMGASMRSE 240
E+ W+HGVF G+ ++SE
Sbjct: 478 ETNSWEHGVFTGSCLKSE 495
Score = 58.0 bits (134), Expect = 7e-09
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +2
Query: 509 LGYIPRAGALNTENLSAVDMNKLFSIPKDFWLHEADAIDKYFKEEVGEDLPNEMWDELNK 688
+G +P G++N E L V+ ++L S+P D+W +A I K+ E+VGEDLP + E++
Sbjct: 587 IGTVPAKGSINLEGLGEVNWDELMSVPADYWKQDAQEIRKFLDEQVGEDLPEPVRAEMDA 646
Query: 689 FRK 697
K
Sbjct: 647 QEK 649
>AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical
protein W05G11.6d protein.
Length = 594
Score = 123 bits (296), Expect = 2e-28
Identities = 50/77 (64%), Positives = 59/77 (76%)
Frame = +3
Query: 255 EHSGXMVMHDPFAMRPFFGYNFGDYLKHWLSMPQPGRKMPKIFHVNWFRKDEQGKFLWPG 434
E +G VMHDP AMRPF GYN+G YL+HW+ + + K PKIFHVNWFR+ + KFLWPG
Sbjct: 497 EFTGKNVMHDPMAMRPFMGYNYGKYLEHWIKLGKAPHKAPKIFHVNWFRETKDHKFLWPG 556
Query: 435 FGENSRVLDWILRRCDG 485
FG+N RVLDWILRR G
Sbjct: 557 FGDNIRVLDWILRRVAG 573
Score = 105 bits (251), Expect = 5e-23
Identities = 44/79 (55%), Positives = 57/79 (72%)
Frame = +1
Query: 4 DWKGQPWDPSKKTPAAHPNSRFCTPAEQCPMIDGEWESSEGVPISAILQGGRRPAGVPLV 183
+W G+ W + AAHPNSRF PA+QCP I +WE+ +GVPI AI+ GGRRP GVPLV
Sbjct: 413 NWLGERWHIGDEGKAAHPNSRFTAPAKQCPNIHPDWEAPQGVPIDAIVFGGRRPEGVPLV 472
Query: 184 VESRDWQHGVFMGASMRSE 240
ES W+HG+ +GA ++SE
Sbjct: 473 FESFSWEHGILVGALVKSE 491
>AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical
protein W05G11.6c protein.
Length = 366
Score = 123 bits (296), Expect = 2e-28
Identities = 50/77 (64%), Positives = 59/77 (76%)
Frame = +3
Query: 255 EHSGXMVMHDPFAMRPFFGYNFGDYLKHWLSMPQPGRKMPKIFHVNWFRKDEQGKFLWPG 434
E +G VMHDP AMRPF GYN+G YL+HW+ + + K PKIFHVNWFR+ + KFLWPG
Sbjct: 212 EFTGKNVMHDPMAMRPFMGYNYGKYLEHWIKLGKAPHKAPKIFHVNWFRETKDHKFLWPG 271
Query: 435 FGENSRVLDWILRRCDG 485
FG+N RVLDWILRR G
Sbjct: 272 FGDNIRVLDWILRRVAG 288
Score = 105 bits (251), Expect = 5e-23
Identities = 44/79 (55%), Positives = 57/79 (72%)
Frame = +1
Query: 4 DWKGQPWDPSKKTPAAHPNSRFCTPAEQCPMIDGEWESSEGVPISAILQGGRRPAGVPLV 183
+W G+ W + AAHPNSRF PA+QCP I +WE+ +GVPI AI+ GGRRP GVPLV
Sbjct: 128 NWLGERWHIGDEGKAAHPNSRFTAPAKQCPNIHPDWEAPQGVPIDAIVFGGRRPEGVPLV 187
Query: 184 VESRDWQHGVFMGASMRSE 240
ES W+HG+ +GA ++SE
Sbjct: 188 FESFSWEHGILVGALVKSE 206
Score = 67.7 bits (158), Expect = 8e-12
Identities = 27/68 (39%), Positives = 41/68 (60%)
Frame = +2
Query: 506 SLGYIPRAGALNTENLSAVDMNKLFSIPKDFWLHEADAIDKYFKEEVGEDLPNEMWDELN 685
++GY+P+ G +N + L +D N L SIPKD+W+ + D + +VG DLP + DEL+
Sbjct: 298 AIGYVPKRGTINLDGLPRIDWNDLMSIPKDYWVEDVDESRHFLDTQVGSDLPQPIRDELD 357
Query: 686 KFRKTYKA 709
K K A
Sbjct: 358 KLEKRVHA 365
>AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical
protein W05G11.6b protein.
Length = 541
Score = 123 bits (296), Expect = 2e-28
Identities = 50/77 (64%), Positives = 59/77 (76%)
Frame = +3
Query: 255 EHSGXMVMHDPFAMRPFFGYNFGDYLKHWLSMPQPGRKMPKIFHVNWFRKDEQGKFLWPG 434
E +G VMHDP AMRPF GYN+G YL+HW+ + + K PKIFHVNWFR+ + KFLWPG
Sbjct: 387 EFTGKNVMHDPMAMRPFMGYNYGKYLEHWIKLGKAPHKAPKIFHVNWFRETKDHKFLWPG 446
Query: 435 FGENSRVLDWILRRCDG 485
FG+N RVLDWILRR G
Sbjct: 447 FGDNIRVLDWILRRVAG 463
Score = 105 bits (251), Expect = 5e-23
Identities = 44/79 (55%), Positives = 57/79 (72%)
Frame = +1
Query: 4 DWKGQPWDPSKKTPAAHPNSRFCTPAEQCPMIDGEWESSEGVPISAILQGGRRPAGVPLV 183
+W G+ W + AAHPNSRF PA+QCP I +WE+ +GVPI AI+ GGRRP GVPLV
Sbjct: 303 NWLGERWHIGDEGKAAHPNSRFTAPAKQCPNIHPDWEAPQGVPIDAIVFGGRRPEGVPLV 362
Query: 184 VESRDWQHGVFMGASMRSE 240
ES W+HG+ +GA ++SE
Sbjct: 363 FESFSWEHGILVGALVKSE 381
Score = 67.7 bits (158), Expect = 8e-12
Identities = 27/68 (39%), Positives = 41/68 (60%)
Frame = +2
Query: 506 SLGYIPRAGALNTENLSAVDMNKLFSIPKDFWLHEADAIDKYFKEEVGEDLPNEMWDELN 685
++GY+P+ G +N + L +D N L SIPKD+W+ + D + +VG DLP + DEL+
Sbjct: 473 AIGYVPKRGTINLDGLPRIDWNDLMSIPKDYWVEDVDESRHFLDTQVGSDLPQPIRDELD 532
Query: 686 KFRKTYKA 709
K K A
Sbjct: 533 KLEKRVHA 540
>AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical
protein W05G11.6a protein.
Length = 651
Score = 123 bits (296), Expect = 2e-28
Identities = 50/77 (64%), Positives = 59/77 (76%)
Frame = +3
Query: 255 EHSGXMVMHDPFAMRPFFGYNFGDYLKHWLSMPQPGRKMPKIFHVNWFRKDEQGKFLWPG 434
E +G VMHDP AMRPF GYN+G YL+HW+ + + K PKIFHVNWFR+ + KFLWPG
Sbjct: 497 EFTGKNVMHDPMAMRPFMGYNYGKYLEHWIKLGKAPHKAPKIFHVNWFRETKDHKFLWPG 556
Query: 435 FGENSRVLDWILRRCDG 485
FG+N RVLDWILRR G
Sbjct: 557 FGDNIRVLDWILRRVAG 573
Score = 105 bits (251), Expect = 5e-23
Identities = 44/79 (55%), Positives = 57/79 (72%)
Frame = +1
Query: 4 DWKGQPWDPSKKTPAAHPNSRFCTPAEQCPMIDGEWESSEGVPISAILQGGRRPAGVPLV 183
+W G+ W + AAHPNSRF PA+QCP I +WE+ +GVPI AI+ GGRRP GVPLV
Sbjct: 413 NWLGERWHIGDEGKAAHPNSRFTAPAKQCPNIHPDWEAPQGVPIDAIVFGGRRPEGVPLV 472
Query: 184 VESRDWQHGVFMGASMRSE 240
ES W+HG+ +GA ++SE
Sbjct: 473 FESFSWEHGILVGALVKSE 491
Score = 67.7 bits (158), Expect = 8e-12
Identities = 27/68 (39%), Positives = 41/68 (60%)
Frame = +2
Query: 506 SLGYIPRAGALNTENLSAVDMNKLFSIPKDFWLHEADAIDKYFKEEVGEDLPNEMWDELN 685
++GY+P+ G +N + L +D N L SIPKD+W+ + D + +VG DLP + DEL+
Sbjct: 583 AIGYVPKRGTINLDGLPRIDWNDLMSIPKDYWVEDVDESRHFLDTQVGSDLPQPIRDELD 642
Query: 686 KFRKTYKA 709
K K A
Sbjct: 643 KLEKRVHA 650
>Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical
protein R11A5.4b protein.
Length = 582
Score = 108 bits (260), Expect = 4e-24
Identities = 44/78 (56%), Positives = 56/78 (71%)
Frame = +1
Query: 7 WKGQPWDPSKKTPAAHPNSRFCTPAEQCPMIDGEWESSEGVPISAILQGGRRPAGVPLVV 186
W G+ W + AAHPNSRF PA QCP+I +WES +GVPI AI+ GGRRP GVPL+
Sbjct: 418 WLGEKWHIGEPGVAAHPNSRFAAPANQCPIIHPDWESPQGVPIEAIIFGGRRPQGVPLIY 477
Query: 187 ESRDWQHGVFMGASMRSE 240
E+ W+HGVF G+ ++SE
Sbjct: 478 ETNSWEHGVFTGSCLKSE 495
Score = 61.7 bits (143), Expect = 6e-10
Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 255 EHSGXMVMHDPFAMRPFFGYNFGDYLKHWLSMPQPGRKM-PKIFHVNWFRKDEQGK 419
E +G VMHDP AMRPF GYNFG YL+HWL + RK+ F W K + +
Sbjct: 501 EFTGKTVMHDPMAMRPFMGYNFGKYLQHWLDLKTDSRKIFQNQFVPRWMLKRRESR 556
>AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical
protein H04M03.1 protein.
Length = 624
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +1
Query: 106 EWESSEGVPISAILQGGRRPAGVPLVVESRDWQHGVFMGASMR 234
+W S GVPISA++ RR PL++E+ W+ GV + A +R
Sbjct: 405 KWASDVGVPISALIFANRRHDQYPLILEANTWEEGVCVAAGIR 447
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Frame = +3
Query: 285 PFAMRPFFGYNFGDYLKHWLSMPQPGRKM---------PKIFHVNWFRKDEQGKFLWPGF 437
P ++ Y+KHWL M + P+IF N +++ + GK LWPG
Sbjct: 478 PMLRADAINFSIAKYVKHWLEMGVGVKSSSENFENPPPPQIFFTNLYQEVD-GKPLWPGG 536
Query: 438 GENSRVLDWILRRC 479
+N+R+ ++I RC
Sbjct: 537 VDNARIFEYIYERC 550
>DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related
alternative variant a protein.
Length = 507
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -2
Query: 237 GPHGSSHEHAVLPVPRLDYERYAGRPSA 154
GP S + AV PVP Y Y G PSA
Sbjct: 451 GPASSIRKSAVRPVPSYVYSSYKGMPSA 478
>AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform a
protein.
Length = 507
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -2
Query: 237 GPHGSSHEHAVLPVPRLDYERYAGRPSA 154
GP S + AV PVP Y Y G PSA
Sbjct: 451 GPASSIRKSAVRPVPSYVYSSYKGMPSA 478
>Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical
protein R11A5.1b protein.
Length = 896
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 435 FGENSRVLDWILRRCDGEPCH--AETPWGTYREPV 533
FG+++ +WIL R DG H E P+G +P+
Sbjct: 774 FGDSATSREWILTRDDGHEKHFRFEVPYGEQVQPI 808
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 435 FGENSRVLDWILRRCDGEPCH--AETPWGTYREPV 533
FG+++ +WIL R DG H E P+G +P+
Sbjct: 784 FGDSATSREWILTRDDGHEKHFRFEVPYGEQVQPI 818
>Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical
protein C04G2.8 protein.
Length = 197
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -2
Query: 510 RESRRGRAPHRSDVRSSLRPESSRRNRARGTYPVRLYGTS*HGRS 376
R S R+ RS VRS+ R SRR+ +RG+ +YG + RS
Sbjct: 82 RRSSTSRSSRRSVVRSASRGSVSRRSSSRGS----VYGRTGRSRS 122
>Z69636-2|CAA93463.3| 247|Caenorhabditis elegans Hypothetical
protein F20B10.3 protein.
Length = 247
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = -3
Query: 212 TPCCQSRDSTTSGTPAGRLPPCRMADIGTPSELSHSPSIMGHCSAGVQNLEFGCAAG 42
TPC ST + P L PC + G+ + SP G+C GV C+ G
Sbjct: 52 TPC-----STGNCQPTPTLSPCASGNCGSVQPVQASPCSTGNC--GVTQQASACSTG 101
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 252 GGRGLGPHGSSHEHAVLPVPRL 187
GG G GP GS + H VL P L
Sbjct: 802 GGGGGGPEGSDNTHGVLMTPNL 823
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 252 GGRGLGPHGSSHEHAVLPVPRL 187
GG G GP GS + H VL P L
Sbjct: 802 GGGGGGPEGSDNTHGVLMTPNL 823
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 252 GGRGLGPHGSSHEHAVLPVPRL 187
GG G GP GS + H VL P L
Sbjct: 802 GGGGGGPEGSDNTHGVLMTPNL 823
>U58746-10|AAY86270.1| 77|Caenorhabditis elegans Hypothetical
protein R05G6.12 protein.
Length = 77
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +1
Query: 16 QPWDPSKKTPAAHPNSRFCTPAEQCPMIDGEWESSEGVPISAILQGG 156
+PW P ++ A N C +DG E++ G I LQ G
Sbjct: 19 KPWSPMRRKRARSSNPNGCKTKPTTLEVDGATENNNGKLILPYLQYG 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,205,552
Number of Sequences: 27780
Number of extensions: 447154
Number of successful extensions: 1369
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1367
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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