Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0232
         (680 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr...   118   3e-27
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr...   118   3e-27
AC025722-7|AAK68510.1|  540|Caenorhabditis elegans Hypothetical ...    32   0.33 
Z81504-3|CAB04117.2|  349|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z81549-11|CAB04470.1|  335|Caenorhabditis elegans Hypothetical p...    28   5.4  
Z81503-3|CAB04113.1|  518|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical protein
            W07E11.1 protein.
          Length = 2207

 Score =  118 bits (285), Expect = 3e-27
 Identities = 51/84 (60%), Positives = 63/84 (75%)
 Frame = +2

Query: 2    DYVGKGLSGGTVVIYPPRDSPFESHLNVIVGNVCLYGATSGRAYFRGIASERFCVRNSSC 181
            DYVGK LSGG +VI+PP+ + ++S  N ++GNV LYGATSG  +FRG+A ERF VRNS  
Sbjct: 1391 DYVGKCLSGGKIVIFPPKAASYKSEENSVIGNVALYGATSGDCWFRGVAGERFAVRNSGA 1450

Query: 182  TAVVEVVGDHACEYMTXGAALVLG 253
              +VE VGDH CEYMT G  +VLG
Sbjct: 1451 NVIVEAVGDHGCEYMTGGRVIVLG 1474



 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 26/76 (34%), Positives = 40/76 (52%)
 Frame = +1

Query: 280  MSGGIAYVYDIDGSFKGKCNPEMVXXXXXXXXXXXKYVQKLLEEFVEYTGSLIAVELLKT 459
            MSGGIAY++  + +F    N   V            +V+  +EEFV+ TGS +   +L  
Sbjct: 1484 MSGGIAYLFAQEDNFSRLINAATVDLDDASTEDLI-FVKAKIEEFVKLTGSELGQRILTN 1542

Query: 460  WPEPAKKFVKVFPYEY 507
            W +  +K +KVFP +Y
Sbjct: 1543 WQKEHQKIIKVFPRDY 1558


>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical protein
            W07E11.1 protein.
          Length = 2207

 Score =  118 bits (285), Expect = 3e-27
 Identities = 51/84 (60%), Positives = 63/84 (75%)
 Frame = +2

Query: 2    DYVGKGLSGGTVVIYPPRDSPFESHLNVIVGNVCLYGATSGRAYFRGIASERFCVRNSSC 181
            DYVGK LSGG +VI+PP+ + ++S  N ++GNV LYGATSG  +FRG+A ERF VRNS  
Sbjct: 1391 DYVGKCLSGGKIVIFPPKAASYKSEENSVIGNVALYGATSGDCWFRGVAGERFAVRNSGA 1450

Query: 182  TAVVEVVGDHACEYMTXGAALVLG 253
              +VE VGDH CEYMT G  +VLG
Sbjct: 1451 NVIVEAVGDHGCEYMTGGRVIVLG 1474



 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 26/76 (34%), Positives = 40/76 (52%)
 Frame = +1

Query: 280  MSGGIAYVYDIDGSFKGKCNPEMVXXXXXXXXXXXKYVQKLLEEFVEYTGSLIAVELLKT 459
            MSGGIAY++  + +F    N   V            +V+  +EEFV+ TGS +   +L  
Sbjct: 1484 MSGGIAYLFAQEDNFSRLINAATVDLDDASTEDLI-FVKAKIEEFVKLTGSELGQRILTN 1542

Query: 460  WPEPAKKFVKVFPYEY 507
            W +  +K +KVFP +Y
Sbjct: 1543 WQKEHQKIIKVFPRDY 1558


>AC025722-7|AAK68510.1|  540|Caenorhabditis elegans Hypothetical
           protein Y50D4C.5 protein.
          Length = 540

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = -3

Query: 294 DATAHAGREVPAGGPSTSAAPXVMYSHAWSPTTST 190
           D  A AG  +PAG PS S     + S A +PT ST
Sbjct: 316 DTLAEAGTRIPAGMPSRSMTDVTLASTASTPTPST 350


>Z81504-3|CAB04117.2|  349|Caenorhabditis elegans Hypothetical
           protein F15H9.3 protein.
          Length = 349

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
 Frame = +2

Query: 293 SPTSTTLMVHSKGNVILKWLNSY-----LWNSKTTSNMYRNFSKNS 415
           +P+S + +   K ++IL  L  +     +WNSK TS   +NF KN+
Sbjct: 127 NPSSKSKLYLEKASLILTHLFPFSSAFCMWNSKITSRQKQNFVKNN 172


>Z81549-11|CAB04470.1|  335|Caenorhabditis elegans Hypothetical
           protein F55C9.13 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 570 HQNGVLDIEETVKDVEFEKKNLEKILDKTRGFMKYGR 680
           H       +E  KDV+++++N++ ++    GFMK  R
Sbjct: 212 HVGSEASADEIFKDVKYKEENVKSVIQWNWGFMKVKR 248


>Z81503-3|CAB04113.1|  518|Caenorhabditis elegans Hypothetical
           protein F14F7.3 protein.
          Length = 518

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 482 NFFAGSGHVFNSSTAISDPVYSTNSSRSFCT 390
           N F+  GH +     IS P +S NS R   T
Sbjct: 116 NLFSSQGHRWKRLRTISSPTFSNNSLRKLKT 146


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,525,399
Number of Sequences: 27780
Number of extensions: 216448
Number of successful extensions: 790
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)